RNA–Protein interactions for RNA: ENST00000581767.1

DDX42-214, Transcript of DEAD-box helicase 42, humanhuman

Gene DDX42, Length 2,244 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-214ENST00000581767 RIMS2Q9UQ26 1411 aa12.98□□□□□ -0.33
DDX42-214ENST00000581767 SLC26A8Q96RN1 970 aa12.98□□□□□ -0.33
DDX42-214ENST00000581767 RRBP1Q9P2E9 1410 aaKnown RBP12.98□□□□□ -0.33
DDX42-214ENST00000581767 TMEM131LA2VDJ0 1609 aa12.98□□□□□ -0.33
DDX42-214ENST00000581767 PLEKHG1Q9ULL1 1385 aa12.98□□□□□ -0.33
DDX42-214ENST00000581767 ALKQ9UM73 1620 aa12.97□□□□□ -0.33
DDX42-214ENST00000581767 ZFYVE9O95405 1425 aa12.97□□□□□ -0.33
DDX42-214ENST00000581767 PROSER2Q86WR7 435 aaPredicted RBP12.96□□□□□ -0.34
DDX42-214ENST00000581767 MYO5BQ9ULV0 1848 aa12.95□□□□□ -0.34
DDX42-214ENST00000581767 NKTRP30414 1462 aaKnown RBP12.95□□□□□ -0.34
DDX42-214ENST00000581767 NWD1Q149M9 1564 aa12.94□□□□□ -0.34
DDX42-214ENST00000581767 TMEM94Q12767 1356 aa12.94□□□□□ -0.34
DDX42-214ENST00000581767 XIRP1Q702N8 1843 aaKnown RBP12.93□□□□□ -0.34
DDX42-214ENST00000581767 ILDR2Q71H61 639 aa12.93□□□□□ -0.34
DDX42-214ENST00000581767 TBX22Q9Y458 520 aa12.93□□□□□ -0.34
DDX42-214ENST00000581767 DIP2AQ14689 1571 aa12.91□□□□□ -0.34
DDX42-214ENST00000581767 MED1Q15648 1581 aaPredicted RBP12.91□□□□□ -0.34
DDX42-214ENST00000581767 SPHKAPQ2M3C7 1700 aa12.91□□□□□ -0.34
DDX42-214ENST00000581767 NAIPQ13075 1403 aa12.91□□□□□ -0.34
DDX42-214ENST00000581767 SENP3Q9H4L4 574 aaPredicted RBP12.9□□□□□ -0.34
DDX42-214ENST00000581767 MSH6P52701 1360 aa12.9□□□□□ -0.34
DDX42-214ENST00000581767 PIK3R4Q99570 1358 aa12.9□□□□□ -0.34
DDX42-214ENST00000581767 FAM135BQ49AJ0 1406 aa12.89□□□□□ -0.35
DDX42-214ENST00000581767 SOCS7O14512 581 aa12.89□□□□□ -0.35
DDX42-214ENST00000581767 CHD2O14647 1828 aaKnown RBP12.89□□□□□ -0.35
DDX42-214ENST00000581767 ZNF326Q5BKZ1 582 aaKnown RBP12.88□□□□□ -0.35
DDX42-214ENST00000581767 NUTM2DQ5VT03 806 aaPredicted RBP12.88□□□□□ -0.35
DDX42-214ENST00000581767 NCOA3Q9Y6Q9 1424 aa12.88□□□□□ -0.35
DDX42-214ENST00000581767 TRIM52Q96A61 297 aa12.88□□□□□ -0.35
DDX42-214ENST00000581767 PHF23Q9BUL5 403 aaPredicted RBP12.88□□□□□ -0.35
DDX42-214ENST00000581767 HFM1A2PYH4 1435 aa12.87□□□□□ -0.35
DDX42-214ENST00000581767 TRPM2O94759 1503 aa12.87□□□□□ -0.35
DDX42-214ENST00000581767 ADAMTS13Q76LX8 1427 aa12.87□□□□□ -0.35
DDX42-214ENST00000581767 RBM33Q96EV2 1170 aaKnown RBP12.86□□□□□ -0.35
DDX42-214ENST00000581767 C14orf37Q86TY3 774 aa12.85□□□□□ -0.35
DDX42-214ENST00000581767 ROBO1Q9Y6N7 1651 aa12.84□□□□□ -0.35
DDX42-214ENST00000581767 CLTCL1P53675 1640 aa12.84□□□□□ -0.35
DDX42-214ENST00000581767 SLAIN2Q9P270 581 aa12.83□□□□□ -0.36
DDX42-214ENST00000581767 SETBP1Q9Y6X0 1596 aa12.83□□□□□ -0.36
DDX42-214ENST00000581767 SLC4A1APQ9BWU0 796 aaKnown RBP12.82□□□□□ -0.36
DDX42-214ENST00000581767 AMOTL2Q9Y2J4 779 aa12.82□□□□□ -0.36
DDX42-214ENST00000581767 KIF1BO60333 1816 aa12.82□□□□□ -0.36
DDX42-214ENST00000581767 ATF3P18847 181 aa12.81□□□□□ -0.36
DDX42-214ENST00000581767 CADPS2Q86UW7 1296 aa12.81□□□□□ -0.36
DDX42-214ENST00000581767 C19orf44Q9H6X5 657 aa12.81□□□□□ -0.36
DDX42-214ENST00000581767 NEXMIFQ5QGS0 1516 aa12.8□□□□□ -0.36
DDX42-214ENST00000581767 ACIN1Q9UKV3 1341 aaKnown RBP12.79□□□□□ -0.36
DDX42-214ENST00000581767 PTPRUQ92729 1446 aa12.79□□□□□ -0.36
DDX42-214ENST00000581767 NRXN3Q9Y4C0 1643 aa12.79□□□□□ -0.36
DDX42-214ENST00000581767 RPGRIP1LQ68CZ1 1315 aa12.79□□□□□ -0.36
DDX42-214ENST00000581767 VGFO15240 615 aaPredicted RBP12.78□□□□□ -0.36
DDX42-214ENST00000581767 PHLPP1O60346 1717 aa12.78□□□□□ -0.36
DDX42-214ENST00000581767 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.78□□□□□ -0.36
DDX42-214ENST00000581767 XRN1Q8IZH2 1706 aaKnown RBP12.77□□□□□ -0.36
DDX42-214ENST00000581767 DCCP43146 1447 aa12.76□□□□□ -0.37
DDX42-214ENST00000581767 METP08581 1390 aa12.76□□□□□ -0.37
DDX42-214ENST00000581767 JCADQ9P266 1359 aa12.76□□□□□ -0.37
DDX42-214ENST00000581767 CCDC144AA2RUR9 1427 aa12.73□□□□□ -0.37
DDX42-214ENST00000581767 MPHOSPH9Q99550 1183 aa12.73□□□□□ -0.37
DDX42-214ENST00000581767 AHDC1Q5TGY3 1603 aaPredicted RBP12.72□□□□□ -0.37
DDX42-214ENST00000581767 COL16A1Q07092 1604 aaPredicted RBP12.72□□□□□ -0.37
DDX42-214ENST00000581767 ADGRL3Q9HAR2 1447 aa12.72□□□□□ -0.37
DDX42-214ENST00000581767 PPLO60437 1756 aa12.71□□□□□ -0.37
DDX42-214ENST00000581767 FOXD1Q16676 465 aa12.71□□□□□ -0.37
DDX42-214ENST00000581767 SPATA31A6Q5VVP1 1343 aa12.7□□□□□ -0.38
DDX42-214ENST00000581767 BRINP3Q76B58 766 aa12.7□□□□□ -0.38
DDX42-214ENST00000581767 PTCH1Q13635 1447 aa12.7□□□□□ -0.38
DDX42-214ENST00000581767 SETD5Q9C0A6 1442 aa12.7□□□□□ -0.38
DDX42-214ENST00000581767 MST1RQ04912 1400 aa12.69□□□□□ -0.38
DDX42-214ENST00000581767 RGS17Q9UGC6 210 aaPredicted RBP12.69□□□□□ -0.38
DDX42-214ENST00000581767 SETD1AO15047 1707 aaKnown RBP12.69□□□□□ -0.38
DDX42-214ENST00000581767 ANKRD30BQ9BXX2 1392 aa12.68□□□□□ -0.38
DDX42-214ENST00000581767 ASXL1Q8IXJ9 1541 aa12.68□□□□□ -0.38
DDX42-214ENST00000581767 MEX3CQ5U5Q3 659 aaKnown RBP12.68□□□□□ -0.38
DDX42-214ENST00000581767 PRAG1Q86YV5 1406 aa12.67□□□□□ -0.38
DDX42-214ENST00000581767 NALCNQ8IZF0 1738 aa12.67□□□□□ -0.38
DDX42-214ENST00000581767 RGL3Q3MIN7 710 aa12.67□□□□□ -0.38
DDX42-214ENST00000581767 SHPRHQ149N8 1683 aa12.67□□□□□ -0.38
DDX42-214ENST00000581767 SPATA31E1Q6ZUB1 1445 aa12.66□□□□□ -0.38
DDX42-214ENST00000581767 ROBO2Q9HCK4 1378 aa12.66□□□□□ -0.38
DDX42-214ENST00000581767 NHSL1Q5SYE7 1610 aa12.65□□□□□ -0.38
DDX42-214ENST00000581767 LRRC59Q96AG4 307 aaKnown RBP12.65□□□□□ -0.38
DDX42-214ENST00000581767 ADGRF5Q8IZF2 1346 aa12.64□□□□□ -0.39
DDX42-214ENST00000581767 POTEAQ6S8J7 498 aa12.64□□□□□ -0.39
DDX42-214ENST00000581767 C1orf167Q5SNV9 1468 aa12.64□□□□□ -0.39
DDX42-214ENST00000581767 IFT172Q9UG01 1749 aa12.63□□□□□ -0.39
DDX42-214ENST00000581767 RAB3GAP2Q9H2M9 1393 aa12.63□□□□□ -0.39
DDX42-214ENST00000581767 ZNF772Q68DY9 489 aaPredicted RBP12.62□□□□□ -0.39
DDX42-214ENST00000581767 LRP6O75581 1613 aa12.62□□□□□ -0.39
DDX42-214ENST00000581767 LRPPRCP42704 1394 aaKnown RBP12.61□□□□□ -0.39
DDX42-214ENST00000581767 NUTM2BA6NNL0 878 aaPredicted RBP12.61□□□□□ -0.39
DDX42-214ENST00000581767 NUTM2EB1AL46 878 aaPredicted RBP12.61□□□□□ -0.39
DDX42-214ENST00000581767 NUTM2AQ8IVF1 878 aaPredicted RBP12.61□□□□□ -0.39
DDX42-214ENST00000581767 STK26Q9P289 416 aa12.61□□□□□ -0.39
DDX42-214ENST00000581767 TECPR2O15040 1411 aa12.6□□□□□ -0.39
DDX42-214ENST00000581767 PIK3C2GO75747 1445 aa12.6□□□□□ -0.39
DDX42-214ENST00000581767 CDC42BPGQ6DT37 1551 aa12.59□□□□□ -0.39
DDX42-214ENST00000581767 ABCC11Q96J66 1382 aa12.59□□□□□ -0.39
DDX42-214ENST00000581767 KNDC1Q76NI1 1749 aa12.59□□□□□ -0.39
DDX42-214ENST00000581767 MYOM2P54296 1465 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms