RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 NCOA3Q9Y6Q9 1424 aa22.16■■□□□ 1.14
CSNK1D-219ENST00000581660 CHD2O14647 1828 aaKnown RBP22.15■■□□□ 1.14
CSNK1D-219ENST00000581660 NOS1P29475 1434 aa22.14■■□□□ 1.14
CSNK1D-219ENST00000581660 MEX3CQ5U5Q3 659 aaKnown RBP22.14■■□□□ 1.13
CSNK1D-219ENST00000581660 KANK1Q14678 1352 aa22.13■■□□□ 1.13
CSNK1D-219ENST00000581660 RXRBP28702 533 aa22.13■■□□□ 1.13
CSNK1D-219ENST00000581660 CROCC2H7BZ55 1655 aa22.11■■□□□ 1.13
CSNK1D-219ENST00000581660 ZFYVE9O95405 1425 aa22.11■■□□□ 1.13
CSNK1D-219ENST00000581660 PLEKHG1Q9ULL1 1385 aa22.11■■□□□ 1.13
CSNK1D-219ENST00000581660 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.09■■□□□ 1.132e-7■□□□□ 9.1
CSNK1D-219ENST00000581660 DIP2AQ14689 1571 aa22.08■■□□□ 1.13
CSNK1D-219ENST00000581660 ABCC5O15440 1437 aa22.08■■□□□ 1.13
CSNK1D-219ENST00000581660 SLC52A1Q9NWF4 448 aa22.08■■□□□ 1.13
CSNK1D-219ENST00000581660 RRP7BPQ9NSQ0 103 aa22.06■■□□□ 1.12
CSNK1D-219ENST00000581660 CADPS2Q86UW7 1296 aa22.05■■□□□ 1.12
CSNK1D-219ENST00000581660 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.04■■□□□ 1.12
CSNK1D-219ENST00000581660 BCANQ96GW7 911 aa22.04■■□□□ 1.12
CSNK1D-219ENST00000581660 TBX22Q9Y458 520 aa22.03■■□□□ 1.12
CSNK1D-219ENST00000581660 C19orf44Q9H6X5 657 aa22.02■■□□□ 1.12
CSNK1D-219ENST00000581660 RGS12O14924 1447 aa22.01■■□□□ 1.11
CSNK1D-219ENST00000581660 RIMS2Q9UQ26 1411 aa22.01■■□□□ 1.11
CSNK1D-219ENST00000581660 RPRD2Q5VT52 1461 aaKnown RBP22.01■■□□□ 1.11
CSNK1D-219ENST00000581660 AFF2P51816 1311 aa22■■□□□ 1.11
CSNK1D-219ENST00000581660 DAPK1P53355 1430 aa21.99■■□□□ 1.11
CSNK1D-219ENST00000581660 VPS8Q8N3P4 1428 aa21.99■■□□□ 1.11
CSNK1D-219ENST00000581660 MYO5BQ9ULV0 1848 aa21.99■■□□□ 1.11
CSNK1D-219ENST00000581660 PIK3R4Q99570 1358 aa21.99■■□□□ 1.11
CSNK1D-219ENST00000581660 ATF3P18847 181 aa21.98■■□□□ 1.11
CSNK1D-219ENST00000581660 HDGFP51858 240 aaKnown RBP21.98■■□□□ 1.11
CSNK1D-219ENST00000581660 KANK4Q5T7N3 995 aaPredicted RBP21.98■■□□□ 1.11
CSNK1D-219ENST00000581660 BRINP3Q76B58 766 aa21.98■■□□□ 1.11
CSNK1D-219ENST00000581660 C14orf37Q86TY3 774 aa21.98■■□□□ 1.11
CSNK1D-219ENST00000581660 TMEM131LA2VDJ0 1609 aa21.98■■□□□ 1.11
CSNK1D-219ENST00000581660 ADAMTS13Q76LX8 1427 aa21.97■■□□□ 1.11
CSNK1D-219ENST00000581660 SETD5Q9C0A6 1442 aa21.97■■□□□ 1.11
CSNK1D-219ENST00000581660 PPP1R15AO75807 674 aaPredicted RBP21.96■■□□□ 1.11
CSNK1D-219ENST00000581660 DCCP43146 1447 aa21.96■■□□□ 1.11
CSNK1D-219ENST00000581660 PTPN23Q9H3S7 1636 aa21.95■■□□□ 1.1
CSNK1D-219ENST00000581660 GCC2Q8IWJ2 1684 aa21.95■■□□□ 1.1
CSNK1D-219ENST00000581660 NUTM2BA6NNL0 878 aaPredicted RBP21.95■■□□□ 1.1
CSNK1D-219ENST00000581660 NUTM2EB1AL46 878 aaPredicted RBP21.95■■□□□ 1.1
CSNK1D-219ENST00000581660 NUTM2AQ8IVF1 878 aaPredicted RBP21.95■■□□□ 1.1
CSNK1D-219ENST00000581660 ANKRD30AQ9BXX3 1397 aa21.95■■□□□ 1.1
CSNK1D-219ENST00000581660 RBM6P78332 1123 aaKnown RBP21.94■■□□□ 1.1
CSNK1D-219ENST00000581660 ASXL1Q8IXJ9 1541 aa21.94■■□□□ 1.1
CSNK1D-219ENST00000581660 NHSL1Q5SYE7 1610 aa21.92■■□□□ 1.1
CSNK1D-219ENST00000581660 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.91■■□□□ 1.1
CSNK1D-219ENST00000581660 QTRT2Q9H974 415 aaKnown RBP21.89■■□□□ 1.09
CSNK1D-219ENST00000581660 TRPM2O94759 1503 aa21.88■■□□□ 1.09
CSNK1D-219ENST00000581660 ATAD2Q6PL18 1390 aa21.87■■□□□ 1.09
CSNK1D-219ENST00000581660 MST1RQ04912 1400 aa21.87■■□□□ 1.09
CSNK1D-219ENST00000581660 ADGRL2O95490 1459 aa21.86■■□□□ 1.09
CSNK1D-219ENST00000581660 LRRC59Q96AG4 307 aaKnown RBP21.86■■□□□ 1.09
CSNK1D-219ENST00000581660 C8orf37Q96NL8 207 aa21.86■■□□□ 1.09
CSNK1D-219ENST00000581660 PTPRUQ92729 1446 aa21.86■■□□□ 1.09
CSNK1D-219ENST00000581660 PNPLA6Q8IY17 1366 aa21.86■■□□□ 1.09
CSNK1D-219ENST00000581660 NUTM2DQ5VT03 806 aaPredicted RBP21.85■■□□□ 1.09
CSNK1D-219ENST00000581660 FOXD1Q16676 465 aa21.83■■□□□ 1.09
CSNK1D-219ENST00000581660 NGLY1Q96IV0 654 aa21.83■■□□□ 1.09
CSNK1D-219ENST00000581660 CHIC2Q9UKJ5 165 aa21.83■■□□□ 1.09
CSNK1D-219ENST00000581660 AMOTL2Q9Y2J4 779 aa21.83■■□□□ 1.09
CSNK1D-219ENST00000581660 XRN1Q8IZH2 1706 aaKnown RBP21.83■■□□□ 1.08
CSNK1D-219ENST00000581660 EP400Q96L91 3159 aa21.81■■□□□ 1.08
CSNK1D-219ENST00000581660 ZRANB1Q9UGI0 708 aa21.81■■□□□ 1.08
CSNK1D-219ENST00000581660 UNC13BO14795 1591 aa21.81■■□□□ 1.08
CSNK1D-219ENST00000581660 SETBP1Q9Y6X0 1596 aa21.79■■□□□ 1.08
CSNK1D-219ENST00000581660 ANKRD50Q9ULJ7 1429 aa21.79■■□□□ 1.08
CSNK1D-219ENST00000581660 LAMC1P11047 1609 aa21.76■■□□□ 1.07
CSNK1D-219ENST00000581660 NRXN3Q9Y4C0 1643 aa21.76■■□□□ 1.07
CSNK1D-219ENST00000581660 CHGAP10645 457 aaKnown RBP21.75■■□□□ 1.07
CSNK1D-219ENST00000581660 ADGRL3Q9HAR2 1447 aa21.74■■□□□ 1.07
CSNK1D-219ENST00000581660 E9PCH4 1651 aa21.73■■□□□ 1.07
CSNK1D-219ENST00000581660 TRPC5Q9UL62 973 aaPredicted RBP21.73■■□□□ 1.07
CSNK1D-219ENST00000581660 CCDC125Q86Z20 511 aa21.72■■□□□ 1.07
CSNK1D-219ENST00000581660 DDX17Q92841 729 aaKnown RBP21.72■■□□□ 1.07
CSNK1D-219ENST00000581660 ATRNO75882 1429 aa21.72■■□□□ 1.07
CSNK1D-219ENST00000581660 PTCH1Q13635 1447 aa21.72■■□□□ 1.07
CSNK1D-219ENST00000581660 ADAMTS2O95450 1211 aa21.71■■□□□ 1.07
CSNK1D-219ENST00000581660 FNBP4Q8N3X1 1017 aaPredicted RBP21.71■■□□□ 1.07
CSNK1D-219ENST00000581660 USP21Q9UK80 565 aa21.7■■□□□ 1.06
CSNK1D-219ENST00000581660 NALCNQ8IZF0 1738 aa21.69■■□□□ 1.06
CSNK1D-219ENST00000581660 IQGAP3Q86VI3 1631 aa21.67■■□□□ 1.06
CSNK1D-219ENST00000581660 C1orf167Q5SNV9 1468 aa21.67■■□□□ 1.06
CSNK1D-219ENST00000581660 METP08581 1390 aa21.66■■□□□ 1.06
CSNK1D-219ENST00000581660 SOS2Q07890 1332 aaPredicted RBP21.66■■□□□ 1.06
CSNK1D-219ENST00000581660 COL22A1Q8NFW1 1626 aaPredicted RBP21.66■■□□□ 1.06
CSNK1D-219ENST00000581660 MYOM2P54296 1465 aa21.6■■□□□ 1.05
CSNK1D-219ENST00000581660 BCL9LQ86UU0 1499 aa21.6■■□□□ 1.05
CSNK1D-219ENST00000581660 LRP5O75197 1615 aa21.6■■□□□ 1.05
CSNK1D-219ENST00000581660 BLMP54132 1417 aaPredicted RBP21.57■■□□□ 1.04
CSNK1D-219ENST00000581660 APLP2Q06481 763 aa21.57■■□□□ 1.04
CSNK1D-219ENST00000581660 ORAI2Q96SN7 254 aa21.55■■□□□ 1.04
CSNK1D-219ENST00000581660 PRAG1Q86YV5 1406 aa21.55■■□□□ 1.04
CSNK1D-219ENST00000581660 MARF1Q9Y4F3 1742 aaKnown RBP21.54■■□□□ 1.04
CSNK1D-219ENST00000581660 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.53■■□□□ 1.04
CSNK1D-219ENST00000581660 FAM50AQ14320 339 aaKnown RBP21.53■■□□□ 1.04
CSNK1D-219ENST00000581660 GJD4Q96KN9 370 aaPredicted RBP21.53■■□□□ 1.04
CSNK1D-219ENST00000581660 NEXMIFQ5QGS0 1516 aa21.52■■□□□ 1.04
CSNK1D-219ENST00000581660 ROCK1Q13464 1354 aa21.51■■□□□ 1.03
CSNK1D-219ENST00000581660 LOC105371045A0A1W2PR82 267 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms