RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.25■■■□□ 2.91
NDEL1-207ENST00000580012 CERKQ8TCT0 537 aa33.25■■■□□ 2.91
NDEL1-207ENST00000580012 RPGRIP1LQ68CZ1 1315 aa33.25■■■□□ 2.91
NDEL1-207ENST00000580012 MED14O60244 1454 aa33.25■■■□□ 2.91
NDEL1-207ENST00000580012 SCAF11Q99590 1463 aaKnown RBP33.24■■■□□ 2.91
NDEL1-207ENST00000580012 ZNF326Q5BKZ1 582 aaKnown RBP33.23■■■□□ 2.91
NDEL1-207ENST00000580012 NEURL4Q96JN8 1562 aa33.2■■■□□ 2.91
NDEL1-207ENST00000580012 RGL3Q3MIN7 710 aa33.18■■■□□ 2.9
NDEL1-207ENST00000580012 NPHP4O75161 1426 aaPredicted RBP33.18■■■□□ 2.9
NDEL1-207ENST00000580012 NUTM2DQ5VT03 806 aaPredicted RBP33.15■■■□□ 2.9
NDEL1-207ENST00000580012 PLEKHG1Q9ULL1 1385 aa33.13■■■□□ 2.89
NDEL1-207ENST00000580012 SIN3AQ96ST3 1273 aa33.13■■■□□ 2.89
NDEL1-207ENST00000580012 KIF1BO60333 1816 aa33.13■■■□□ 2.89
NDEL1-207ENST00000580012 MYO5BQ9ULV0 1848 aa33.13■■■□□ 2.89
NDEL1-207ENST00000580012 VGFO15240 615 aaPredicted RBP33.12■■■□□ 2.89
NDEL1-207ENST00000580012 PPP1R15AO75807 674 aaPredicted RBP33.12■■■□□ 2.89
NDEL1-207ENST00000580012 NEXMIFQ5QGS0 1516 aa33.11■■■□□ 2.89
NDEL1-207ENST00000580012 POLR1AO95602 1720 aaPredicted RBP33.05■■■□□ 2.88
NDEL1-207ENST00000580012 STAC3Q96MF2 364 aa33.03■■■□□ 2.88
NDEL1-207ENST00000580012 TBX22Q9Y458 520 aa33.03■■■□□ 2.88
NDEL1-207ENST00000580012 ADGRF5Q8IZF2 1346 aa33.02■■■□□ 2.88
NDEL1-207ENST00000580012 CLSPNQ9HAW4 1339 aa33.02■■■□□ 2.88
NDEL1-207ENST00000580012 SLC26A8Q96RN1 970 aa33.01■■■□□ 2.87
NDEL1-207ENST00000580012 NEUROD1Q13562 356 aa33■■■□□ 2.87
NDEL1-207ENST00000580012 ADAMTS13Q76LX8 1427 aa33■■■□□ 2.87
NDEL1-207ENST00000580012 IQGAP1P46940 1657 aa32.99■■■□□ 2.87
NDEL1-207ENST00000580012 BCANQ96GW7 911 aa32.99■■■□□ 2.87
NDEL1-207ENST00000580012 DCAF11Q8TEB1 546 aa32.97■■■□□ 2.87
NDEL1-207ENST00000580012 SENP3Q9H4L4 574 aaPredicted RBP32.95■■■□□ 2.87
NDEL1-207ENST00000580012 SETBP1Q9Y6X0 1596 aa32.93■■■□□ 2.86
NDEL1-207ENST00000580012 L3MBTL2Q969R5 705 aa32.93■■■□□ 2.86
NDEL1-207ENST00000580012 ZNF335Q9H4Z2 1342 aaPredicted RBP32.93■■■□□ 2.86
NDEL1-207ENST00000580012 PPLO60437 1756 aa32.93■■■□□ 2.86
NDEL1-207ENST00000580012 MYOM2P54296 1465 aa32.93■■■□□ 2.86
NDEL1-207ENST00000580012 NRXN1Q9ULB1 1477 aa32.93■■■□□ 2.86
NDEL1-207ENST00000580012 CCER1Q8TC90 406 aaPredicted RBP32.91■■■□□ 2.86
NDEL1-207ENST00000580012 KDM2AQ9Y2K7 1162 aa32.9■■■□□ 2.86
NDEL1-207ENST00000580012 LTBP4Q8N2S1 1624 aa32.88■■■□□ 2.85
NDEL1-207ENST00000580012 PIK3C2GO75747 1445 aa32.87■■■□□ 2.85
NDEL1-207ENST00000580012 PIK3R4Q99570 1358 aa32.87■■■□□ 2.85
NDEL1-207ENST00000580012 KCNA6P17658 529 aa32.87■■■□□ 2.85
NDEL1-207ENST00000580012 C14orf93Q9H972 538 aaKnown RBP32.87■■■□□ 2.85
NDEL1-207ENST00000580012 IFT172Q9UG01 1749 aa32.87■■■□□ 2.85
NDEL1-207ENST00000580012 NRXN3Q9Y4C0 1643 aa32.87■■■□□ 2.85
NDEL1-207ENST00000580012 METP08581 1390 aa32.83■■■□□ 2.85
NDEL1-207ENST00000580012 DIP2AQ14689 1571 aa32.83■■■□□ 2.85
NDEL1-207ENST00000580012 ALKQ9UM73 1620 aa32.8■■■□□ 2.84
NDEL1-207ENST00000580012 CFAP70Q5T0N1 1121 aa32.79■■■□□ 2.84
NDEL1-207ENST00000580012 PTPRUQ92729 1446 aa32.77■■■□□ 2.84
NDEL1-207ENST00000580012 TIMELESSQ9UNS1 1208 aa32.77■■■□□ 2.84
NDEL1-207ENST00000580012 TONSLQ96HA7 1378 aa32.76■■■□□ 2.83
NDEL1-207ENST00000580012 AMOTL2Q9Y2J4 779 aa32.76■■■□□ 2.83
NDEL1-207ENST00000580012 IQSEC2Q5JU85 1478 aa32.75■■■□□ 2.83
NDEL1-207ENST00000580012 PRAG1Q86YV5 1406 aa32.73■■■□□ 2.83
NDEL1-207ENST00000580012 CPS1P31327 1500 aa32.72■■■□□ 2.83
NDEL1-207ENST00000580012 TMEM132EQ6IEE7 984 aa32.7■■■□□ 2.83
NDEL1-207ENST00000580012 NWD1Q149M9 1564 aa32.69■■■□□ 2.82
NDEL1-207ENST00000580012 SETD1AO15047 1707 aaKnown RBP32.68■■■□□ 2.82
NDEL1-207ENST00000580012 STRCP1A6NGW2 1772 aa32.66■■■□□ 2.82
NDEL1-207ENST00000580012 NBPF8Q3BBV2 869 aa32.66■■■□□ 2.82
NDEL1-207ENST00000580012 LRPPRCP42704 1394 aaKnown RBP32.66■■■□□ 2.82
NDEL1-207ENST00000580012 PROSER2Q86WR7 435 aaPredicted RBP32.65■■■□□ 2.82
NDEL1-207ENST00000580012 ABCC11Q96J66 1382 aa32.65■■■□□ 2.82
NDEL1-207ENST00000580012 NKTRP30414 1462 aaKnown RBP32.65■■■□□ 2.82
NDEL1-207ENST00000580012 LRRC7Q96NW7 1537 aa32.65■■■□□ 2.82
NDEL1-207ENST00000580012 CHD2O14647 1828 aaKnown RBP32.65■■■□□ 2.82
NDEL1-207ENST00000580012 ASXL1Q8IXJ9 1541 aa32.63■■■□□ 2.81
NDEL1-207ENST00000580012 NBPF1Q3BBV0 1214 aa32.61■■■□□ 2.81
NDEL1-207ENST00000580012 SIRT1Q96EB6 747 aa32.61■■■□□ 2.81
NDEL1-207ENST00000580012 ADGRB1O14514 1584 aa32.6■■■□□ 2.81
NDEL1-207ENST00000580012 YTHDC2Q9H6S0 1430 aaKnown RBP32.6■■■□□ 2.81
NDEL1-207ENST00000580012 TMEM94Q12767 1356 aa32.59■■■□□ 2.81
NDEL1-207ENST00000580012 TECPR2O15040 1411 aa32.59■■■□□ 2.81
NDEL1-207ENST00000580012 STK26Q9P289 416 aa32.58■■■□□ 2.81
NDEL1-207ENST00000580012 LAMC1P11047 1609 aa32.58■■■□□ 2.81
NDEL1-207ENST00000580012 ROBO2Q9HCK4 1378 aa32.58■■■□□ 2.81
NDEL1-207ENST00000580012 XRN1Q8IZH2 1706 aaKnown RBP32.57■■■□□ 2.81
NDEL1-207ENST00000580012 NCOA3Q9Y6Q9 1424 aa32.57■■■□□ 2.8
NDEL1-207ENST00000580012 PTCH1Q13635 1447 aa32.56■■■□□ 2.8
NDEL1-207ENST00000580012 RBM33Q96EV2 1170 aaKnown RBP32.55■■■□□ 2.8
NDEL1-207ENST00000580012 DISP3Q9P2K9 1392 aa32.54■■■□□ 2.8
NDEL1-207ENST00000580012 UBAP1LF5GYI3 381 aa32.52■■■□□ 2.8
NDEL1-207ENST00000580012 KIAA1210Q9ULL0 1709 aa32.51■■■□□ 2.79
NDEL1-207ENST00000580012 FAM135BQ49AJ0 1406 aa32.48■■■□□ 2.79
NDEL1-207ENST00000580012 GPRASP1Q5JY77 1395 aa32.47■■■□□ 2.79
NDEL1-207ENST00000580012 WAPLQ7Z5K2 1190 aa32.47■■■□□ 2.79
NDEL1-207ENST00000580012 TRAK1Q9UPV9 953 aa32.47■■■□□ 2.79
NDEL1-207ENST00000580012 C19orf44Q9H6X5 657 aa32.46■■■□□ 2.79
NDEL1-207ENST00000580012 DLC1Q96QB1 1528 aa32.44■■■□□ 2.78
NDEL1-207ENST00000580012 ROCK2O75116 1388 aaKnown RBP32.43■■■□□ 2.78
NDEL1-207ENST00000580012 PLEKHH1Q9ULM0 1364 aa32.43■■■□□ 2.78
NDEL1-207ENST00000580012 PRAM1Q96QH2 718 aa32.42■■■□□ 2.78
NDEL1-207ENST00000580012 RALGAPBQ86X10 1494 aa32.42■■■□□ 2.78
NDEL1-207ENST00000580012 TRPM1Q7Z4N2 1603 aa32.4■■■□□ 2.78
NDEL1-207ENST00000580012 KNDC1Q76NI1 1749 aa32.38■■■□□ 2.77
NDEL1-207ENST00000580012 MSH6P52701 1360 aa32.38■■■□□ 2.77
NDEL1-207ENST00000580012 C14orf37Q86TY3 774 aa32.38■■■□□ 2.77
NDEL1-207ENST00000580012 XIRP1Q702N8 1843 aaKnown RBP32.37■■■□□ 2.77
NDEL1-207ENST00000580012 ADGRL3Q9HAR2 1447 aa32.37■■■□□ 2.77
NDEL1-207ENST00000580012 ILDR2Q71H61 639 aa32.37■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms