RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 ZPR1O75312 459 aa11.06□□□□□ -0.64
COPS3-216ENST00000579716 HDGFP51858 240 aaKnown RBP11.06□□□□□ -0.64
COPS3-216ENST00000579716 PTGDRQ13258 359 aa11.06□□□□□ -0.64
COPS3-216ENST00000579716 TRIM67Q6ZTA4 783 aa11.06□□□□□ -0.64
COPS3-216ENST00000579716 SLF2Q8IX21 1173 aa11.05□□□□□ -0.64
COPS3-216ENST00000579716 KCNV2Q8TDN2 545 aa11.05□□□□□ -0.64
COPS3-216ENST00000579716 FAM161AQ3B820 660 aa11.03□□□□□ -0.64
COPS3-216ENST00000579716 ARHGEF1Q92888 912 aaKnown RBP11.03□□□□□ -0.64
COPS3-216ENST00000579716 BLOC1S3Q6QNY0 202 aa11.02□□□□□ -0.65
COPS3-216ENST00000579716 ADGRG1Q9Y653 693 aa11.02□□□□□ -0.65
COPS3-216ENST00000579716 TMUB1Q9BVT8 246 aa11.01□□□□□ -0.65
COPS3-216ENST00000579716 RNF223E7ERA6 249 aa11□□□□□ -0.65
COPS3-216ENST00000579716 PDZRN3Q9UPQ7 1066 aa11□□□□□ -0.65
COPS3-216ENST00000579716 TMEM134Q9H6X4 195 aa10.99□□□□□ -0.65
COPS3-216ENST00000579716 TLL1O43897 1013 aa10.97□□□□□ -0.65
COPS3-216ENST00000579716 SLC10A3P09131 477 aa10.97□□□□□ -0.65
COPS3-216ENST00000579716 PCDHB3Q9Y5E6 796 aa10.97□□□□□ -0.65
COPS3-216ENST00000579716 RCCD1A6NED2 376 aa10.96□□□□□ -0.65
COPS3-216ENST00000579716 PPEF1O14829 653 aaPredicted RBP10.96□□□□□ -0.65
COPS3-216ENST00000579716 DNAJB2P25686 324 aa10.95□□□□□ -0.66
COPS3-216ENST00000579716 NECTIN2Q92692 538 aa10.95□□□□□ -0.66
COPS3-216ENST00000579716 ACTN4O43707 911 aaKnown RBP10.93□□□□□ -0.66
COPS3-216ENST00000579716 TPRNQ4KMQ1 711 aa10.93□□□□□ -0.66
COPS3-216ENST00000579716 LIAT1Q6ZQX7 453 aa10.93□□□□□ -0.66
COPS3-216ENST00000579716 GGCXP38435 758 aa10.92□□□□□ -0.66
COPS3-216ENST00000579716 SLC19A1P41440 591 aa10.92□□□□□ -0.66
COPS3-216ENST00000579716 SPRYD7Q5W111 196 aa10.91□□□□□ -0.66
COPS3-216ENST00000579716 RBM46Q8TBY0 533 aaKnown RBP10.91□□□□□ -0.66
COPS3-216ENST00000579716 PLA2G2CQ5R387 149 aa10.9□□□□□ -0.66
COPS3-216ENST00000579716 SEMA3EO15041 775 aa10.89□□□□□ -0.67
COPS3-216ENST00000579716 S1PR4O95977 384 aa10.89□□□□□ -0.67
COPS3-216ENST00000579716 ZNF787Q6DD87 383 aa10.89□□□□□ -0.67
COPS3-216ENST00000579716 NUTM2FA1L443 756 aa10.88□□□□□ -0.67
COPS3-216ENST00000579716 POTECB2RU33 542 aa10.88□□□□□ -0.67
COPS3-216ENST00000579716 PRR14Q9BWN1 585 aa10.88□□□□□ -0.67
COPS3-216ENST00000579716 CFHP08603 1231 aa10.87□□□□□ -0.67
COPS3-216ENST00000579716 ANKLE1Q8NAG6 615 aa10.87□□□□□ -0.67
COPS3-216ENST00000579716 EIF5BO60841 1220 aaKnown RBP10.86□□□□□ -0.67
COPS3-216ENST00000579716 ZNF598Q86UK7 904 aaKnown RBP10.86□□□□□ -0.67
COPS3-216ENST00000579716 PXYLP1Q8TE99 480 aa10.86□□□□□ -0.67
COPS3-216ENST00000579716 ZNF775Q96BV0 537 aaPredicted RBP10.86□□□□□ -0.67
COPS3-216ENST00000579716 GTF3C3Q9Y5Q9 886 aa10.86□□□□□ -0.67
COPS3-216ENST00000579716 GDF9O60383 454 aa10.85□□□□□ -0.67
COPS3-216ENST00000579716 FECHP22830 423 aa10.84□□□□□ -0.67
COPS3-216ENST00000579716 SCUBE3Q8IX30 993 aa10.84□□□□□ -0.67
COPS3-216ENST00000579716 SLC4A3P48751 1232 aa10.83□□□□□ -0.68
COPS3-216ENST00000579716 PRR20EP86478 221 aa10.83□□□□□ -0.68
COPS3-216ENST00000579716 PRR20CP86479 221 aa10.83□□□□□ -0.68
COPS3-216ENST00000579716 PRR20DP86480 221 aa10.83□□□□□ -0.68
COPS3-216ENST00000579716 PRR20BP86481 221 aa10.83□□□□□ -0.68
COPS3-216ENST00000579716 PRR20AP86496 221 aa10.83□□□□□ -0.68
COPS3-216ENST00000579716 PLCB2Q00722 1185 aa10.83□□□□□ -0.68
COPS3-216ENST00000579716 PODXL2Q9NZ53 605 aa10.83□□□□□ -0.68
COPS3-216ENST00000579716 FCHSD2O94868 740 aa10.82□□□□□ -0.68
COPS3-216ENST00000579716 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.81□□□□□ -0.68
COPS3-216ENST00000579716 ADH1BP00325 375 aa10.81□□□□□ -0.68
COPS3-216ENST00000579716 PUS10Q3MIT2 529 aaKnown RBP10.81□□□□□ -0.68
COPS3-216ENST00000579716 KMT5BQ4FZB7 885 aa10.81□□□□□ -0.68
COPS3-216ENST00000579716 GPR37O15354 613 aa10.8□□□□□ -0.68
COPS3-216ENST00000579716 METTL3Q86U44 580 aaKnown RBP10.8□□□□□ -0.68
COPS3-216ENST00000579716 RBM26Q5T8P6 1007 aaKnown RBP10.79□□□□□ -0.68
COPS3-216ENST00000579716 ZNF697Q5TEC3 545 aa10.79□□□□□ -0.68
COPS3-216ENST00000579716 DGAT1O75907 488 aa10.78□□□□□ -0.68
COPS3-216ENST00000579716 PKD2L1Q9P0L9 805 aa10.78□□□□□ -0.68
COPS3-216ENST00000579716 TNFRSF10AO00220 468 aa10.77□□□□□ -0.69
COPS3-216ENST00000579716 SLC6A16Q9GZN6 736 aa10.77□□□□□ -0.69
COPS3-216ENST00000579716 TESPA1A2RU30 521 aaPredicted RBP10.76□□□□□ -0.69
COPS3-216ENST00000579716 NR1I2O75469 434 aa10.76□□□□□ -0.69
COPS3-216ENST00000579716 OATP04181 439 aa10.76□□□□□ -0.69
COPS3-216ENST00000579716 THAP11Q96EK4 314 aa10.76□□□□□ -0.69
COPS3-216ENST00000579716 NLRP7Q8WX94 980 aa10.75□□□□□ -0.69
COPS3-216ENST00000579716 PHOX2BQ99453 314 aa10.75□□□□□ -0.69
COPS3-216ENST00000579716 PKDCCQ504Y2 493 aa10.74□□□□□ -0.69
COPS3-216ENST00000579716 HIC1Q14526 733 aa10.73□□□□□ -0.69
COPS3-216ENST00000579716 HAP1P54257 671 aaPredicted RBP10.72□□□□□ -0.69
COPS3-216ENST00000579716 MORN1Q5T089 497 aa10.72□□□□□ -0.69
COPS3-216ENST00000579716 FAM160A2Q8N612 972 aaPredicted RBP10.72□□□□□ -0.69
COPS3-216ENST00000579716 SPSB2Q99619 263 aa10.72□□□□□ -0.69
COPS3-216ENST00000579716 ST8SIA5O15466 376 aa10.71□□□□□ -0.69
COPS3-216ENST00000579716 LCE2AQ5TA79 106 aaPredicted RBP10.71□□□□□ -0.69
COPS3-216ENST00000579716 AAASQ9NRG9 546 aa10.71□□□□□ -0.69
COPS3-216ENST00000579716 FAM187AA6NFU0 413 aa10.69□□□□□ -0.7
COPS3-216ENST00000579716 FUT2Q10981 343 aa10.69□□□□□ -0.7
COPS3-216ENST00000579716 DACH1Q9UI36 760 aa10.69□□□□□ -0.7
COPS3-216ENST00000579716 GNPATO15228 680 aa10.68□□□□□ -0.7
COPS3-216ENST00000579716 P3H3Q8IVL6 736 aa10.68□□□□□ -0.7
COPS3-216ENST00000579716 NPM2Q86SE8 214 aaKnown RBP10.67□□□□□ -0.7
COPS3-216ENST00000579716 SLC27A5Q9Y2P5 690 aa10.67□□□□□ -0.7
COPS3-216ENST00000579716 TOR4AQ9NXH8 423 aa10.66□□□□□ -0.7
COPS3-216ENST00000579716 GCGRP47871 477 aa10.65□□□□□ -0.7
COPS3-216ENST00000579716 FOXC1Q12948 553 aa10.64□□□□□ -0.71
COPS3-216ENST00000579716 PRDM9Q9NQV7 894 aa10.64□□□□□ -0.71
COPS3-216ENST00000579716 DDX11L8A8MPP1 907 aa10.63□□□□□ -0.71
COPS3-216ENST00000579716 ATP6V1AP38606 617 aa10.63□□□□□ -0.71
COPS3-216ENST00000579716 RPIAP49247 311 aa10.63□□□□□ -0.71
COPS3-216ENST00000579716 BRICD5Q6PL45 260 aa10.63□□□□□ -0.71
COPS3-216ENST00000579716 FCF1Q9Y324 198 aaKnown RBP10.63□□□□□ -0.71
COPS3-216ENST00000579716 AVPP01185 164 aa10.61□□□□□ -0.71
COPS3-216ENST00000579716 VSIG10Q8N0Z9 540 aa10.61□□□□□ -0.71
COPS3-216ENST00000579716 RDH13Q8NBN7 331 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms