RNA–Protein interactions for RNA: ENST00000579650.5

PROCA1-208, Transcript of protein interacting with cyclin A1, human

TSL 1 (best)

Gene PROCA1, Length 1,007 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PROCA1-208	ENST00000579650	TRIM26	Q12899	539 aa	Predicted RBP	33.66	■■■□□ 2.98
PROCA1-208	ENST00000579650	HDGF	P51858	240 aa	Known RBP	33.63	■■■□□ 2.97
PROCA1-208	ENST00000579650	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	33.62	■■■□□ 2.97
PROCA1-208	ENST00000579650	CCDC144A	A2RUR9	1427 aa		33.6	■■■□□ 2.97
PROCA1-208	ENST00000579650	KIF1B	O60333	1816 aa		33.6	■■■□□ 2.97
PROCA1-208	ENST00000579650	PLEKHG1	Q9ULL1	1385 aa		33.6	■■■□□ 2.97
PROCA1-208	ENST00000579650	CERK	Q8TCT0	537 aa		33.59	■■■□□ 2.97
PROCA1-208	ENST00000579650	NUTM2D	Q5VT03	806 aa	Predicted RBP	33.58	■■■□□ 2.97
PROCA1-208	ENST00000579650	PPP1R15A	O75807	674 aa	Predicted RBP	33.57	■■■□□ 2.96
PROCA1-208	ENST00000579650	ZNF326	Q5BKZ1	582 aa	Known RBP	33.57	■■■□□ 2.96
PROCA1-208	ENST00000579650	ANKRD30B	Q9BXX2	1392 aa		33.54	■■■□□ 2.96
PROCA1-208	ENST00000579650	NEXMIF	Q5QGS0	1516 aa		33.53	■■■□□ 2.96
PROCA1-208	ENST00000579650	SPATA31E1	Q6ZUB1	1445 aa		33.52	■■■□□ 2.96
PROCA1-208	ENST00000579650	SLC26A8	Q96RN1	970 aa		33.51	■■■□□ 2.95
PROCA1-208	ENST00000579650	SENP3	Q9H4L4	574 aa	Predicted RBP	33.48	■■■□□ 2.95
PROCA1-208	ENST00000579650	RPGRIP1L	Q68CZ1	1315 aa		33.48	■■■□□ 2.95
PROCA1-208	ENST00000579650	ADAMTS13	Q76LX8	1427 aa		33.47	■■■□□ 2.95
PROCA1-208	ENST00000579650	BCAN	Q96GW7	911 aa		33.47	■■■□□ 2.95
PROCA1-208	ENST00000579650	CPS1	P31327	1500 aa		33.47	■■■□□ 2.95
PROCA1-208	ENST00000579650	STRCP1	A6NGW2	1772 aa		33.46	■■■□□ 2.95
PROCA1-208	ENST00000579650	TBX22	Q9Y458	520 aa		33.43	■■■□□ 2.94
PROCA1-208	ENST00000579650	IQSEC2	Q5JU85	1478 aa		33.42	■■■□□ 2.94
PROCA1-208	ENST00000579650	SETBP1	Q9Y6X0	1596 aa		33.41	■■■□□ 2.94
PROCA1-208	ENST00000579650	NRXN3	Q9Y4C0	1643 aa		33.4	■■■□□ 2.94
PROCA1-208	ENST00000579650	RGL3	Q3MIN7	710 aa		33.39	■■■□□ 2.94
PROCA1-208	ENST00000579650	PPL	O60437	1756 aa		33.39	■■■□□ 2.94
PROCA1-208	ENST00000579650	DIP2A	Q14689	1571 aa		33.38	■■■□□ 2.93
PROCA1-208	ENST00000579650	VGF	O15240	615 aa	Predicted RBP	33.38	■■■□□ 2.93
PROCA1-208	ENST00000579650	KCNA6	P17658	529 aa		33.38	■■■□□ 2.93
PROCA1-208	ENST00000579650	FBXO41	Q8TF61	875 aa		33.35	■■■□□ 2.93
PROCA1-208	ENST00000579650	LRRC7	Q96NW7	1537 aa		33.34	■■■□□ 2.93
PROCA1-208	ENST00000579650	NWD1	Q149M9	1564 aa		33.34	■■■□□ 2.93
PROCA1-208	ENST00000579650	PIK3R4	Q99570	1358 aa		33.31	■■■□□ 2.92
PROCA1-208	ENST00000579650	IFT172	Q9UG01	1749 aa		33.31	■■■□□ 2.92
PROCA1-208	ENST00000579650	ILDR1	Q86SU0	546 aa	Predicted RBP	33.29	■■■□□ 2.92
PROCA1-208	ENST00000579650	CHD2	O14647	1828 aa	Known RBP	33.29	■■■□□ 2.92
PROCA1-208	ENST00000579650	ADGRF5	Q8IZF2	1346 aa		33.28	■■■□□ 2.92
PROCA1-208	ENST00000579650	DHX57	Q6P158	1386 aa	Known RBP	33.27	■■■□□ 2.92
PROCA1-208	ENST00000579650	PTPRU	Q92729	1446 aa		33.26	■■■□□ 2.91
PROCA1-208	ENST00000579650	NKTR	P30414	1462 aa	Known RBP	33.25	■■■□□ 2.91
PROCA1-208	ENST00000579650	MET	P08581	1390 aa		33.25	■■■□□ 2.91
PROCA1-208	ENST00000579650	ALK	Q9UM73	1620 aa		33.22	■■■□□ 2.91
PROCA1-208	ENST00000579650	MYOM2	P54296	1465 aa		33.2	■■■□□ 2.91
PROCA1-208	ENST00000579650	SETD1A	O15047	1707 aa	Known RBP	33.2	■■■□□ 2.91
PROCA1-208	ENST00000579650	TMEM94	Q12767	1356 aa		33.2	■■■□□ 2.9
PROCA1-208	ENST00000579650	NRXN1	Q9ULB1	1477 aa		33.19	■■■□□ 2.9
PROCA1-208	ENST00000579650	PROSER2	Q86WR7	435 aa	Predicted RBP	33.19	■■■□□ 2.9
PROCA1-208	ENST00000579650	AMOTL2	Q9Y2J4	779 aa		33.19	■■■□□ 2.9
PROCA1-208	ENST00000579650	PIK3C2G	O75747	1445 aa		33.19	■■■□□ 2.9
PROCA1-208	ENST00000579650	XIRP1	Q702N8	1843 aa	Known RBP	33.18	■■■□□ 2.9
PROCA1-208	ENST00000579650	XRN1	Q8IZH2	1706 aa	Known RBP	33.15	■■■□□ 2.9
PROCA1-208	ENST00000579650	PCGF6	Q9BYE7	350 aa		33.15	■■■□□ 2.9
PROCA1-208	ENST00000579650	RBM33	Q96EV2	1170 aa	Known RBP	33.14	■■■□□ 2.9
PROCA1-208	ENST00000579650	UBAP1L	F5GYI3	381 aa		33.13	■■■□□ 2.89
PROCA1-208	ENST00000579650	DCAF11	Q8TEB1	546 aa		33.1	■■■□□ 2.89
PROCA1-208	ENST00000579650	SIN3A	Q96ST3	1273 aa		33.09	■■■□□ 2.89
PROCA1-208	ENST00000579650	STAC3	Q96MF2	364 aa		33.08	■■■□□ 2.89
PROCA1-208	ENST00000579650	C14orf93	Q9H972	538 aa	Known RBP	33.07	■■■□□ 2.88
PROCA1-208	ENST00000579650	NCOA3	Q9Y6Q9	1424 aa		33.07	■■■□□ 2.88
PROCA1-208	ENST00000579650	TOM1	O60784	492 aa		33.06	■■■□□ 2.88
PROCA1-208	ENST00000579650	KDM2A	Q9Y2K7	1162 aa		33.06	■■■□□ 2.88
PROCA1-208	ENST00000579650	ASXL1	Q8IXJ9	1541 aa		33.06	■■■□□ 2.88
PROCA1-208	ENST00000579650	PRAG1	Q86YV5	1406 aa		33.05	■■■□□ 2.88
PROCA1-208	ENST00000579650	CFAP70	Q5T0N1	1121 aa		33.02	■■■□□ 2.88
PROCA1-208	ENST00000579650	PTCH1	Q13635	1447 aa		33.01	■■■□□ 2.87
PROCA1-208	ENST00000579650	TMEM132E	Q6IEE7	984 aa		33	■■■□□ 2.87
PROCA1-208	ENST00000579650	ROBO2	Q9HCK4	1378 aa		32.99	■■■□□ 2.87
PROCA1-208	ENST00000579650	LRPPRC	P42704	1394 aa	Known RBP	32.98	■■■□□ 2.87
PROCA1-208	ENST00000579650	MSH6	P52701	1360 aa		32.98	■■■□□ 2.87
PROCA1-208	ENST00000579650	NEUROD1	Q13562	356 aa		32.98	■■■□□ 2.87
PROCA1-208	ENST00000579650	LAMC1	P11047	1609 aa		32.98	■■■□□ 2.87
PROCA1-208	ENST00000579650	TECPR2	O15040	1411 aa		32.95	■■■□□ 2.87
PROCA1-208	ENST00000579650	ABCC11	Q96J66	1382 aa		32.95	■■■□□ 2.86
PROCA1-208	ENST00000579650	PIP4K2B	P78356	416 aa		32.94	■■■□□ 2.86
PROCA1-208	ENST00000579650	L3MBTL2	Q969R5	705 aa		32.94	■■■□□ 2.86
PROCA1-208	ENST00000579650	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.94	■■■□□ 2.86
PROCA1-208	ENST00000579650	C19orf44	Q9H6X5	657 aa		32.93	■■■□□ 2.86
PROCA1-208	ENST00000579650	C14orf37	Q86TY3	774 aa		32.92	■■■□□ 2.86
PROCA1-208	ENST00000579650	STK26	Q9P289	416 aa		32.92	■■■□□ 2.86
PROCA1-208	ENST00000579650	ADGRB1	O14514	1584 aa		32.91	■■■□□ 2.86
PROCA1-208	ENST00000579650	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.89	■■■□□ 2.86
PROCA1-208	ENST00000579650	KNDC1	Q76NI1	1749 aa		32.88	■■■□□ 2.85
PROCA1-208	ENST00000579650	ADGRL3	Q9HAR2	1447 aa		32.88	■■■□□ 2.85
PROCA1-208	ENST00000579650	SCAF1	Q9H7N4	1312 aa	Known RBP	32.88	■■■□□ 2.85
PROCA1-208	ENST00000579650	DCC	P43146	1447 aa		32.85	■■■□□ 2.85
PROCA1-208	ENST00000579650	SIRT1	Q96EB6	747 aa		32.84	■■■□□ 2.85
PROCA1-208	ENST00000579650	NALCN	Q8IZF0	1738 aa		32.83	■■■□□ 2.85
PROCA1-208	ENST00000579650	CADPS2	Q86UW7	1296 aa		32.83	■■■□□ 2.85
PROCA1-208	ENST00000579650	SLAIN2	Q9P270	581 aa		32.83	■■■□□ 2.85
PROCA1-208	ENST00000579650	ATF3	P18847	181 aa		32.82	■■■□□ 2.84
PROCA1-208	ENST00000579650	WAPL	Q7Z5K2	1190 aa		32.82	■■■□□ 2.84
PROCA1-208	ENST00000579650	FAM135B	Q49AJ0	1406 aa		32.82	■■■□□ 2.84
PROCA1-208	ENST00000579650	PLEKHH1	Q9ULM0	1364 aa		32.82	■■■□□ 2.84
PROCA1-208	ENST00000579650	KIAA1210	Q9ULL0	1709 aa		32.79	■■■□□ 2.84
PROCA1-208	ENST00000579650	DLC1	Q96QB1	1528 aa		32.78	■■■□□ 2.84
PROCA1-208	ENST00000579650	HSPA1L	P34931	641 aa		32.76	■■■□□ 2.83
PROCA1-208	ENST00000579650	NBPF1	Q3BBV0	1214 aa		32.74	■■■□□ 2.83
PROCA1-208	ENST00000579650	MST1R	Q04912	1400 aa		32.74	■■■□□ 2.83
PROCA1-208	ENST00000579650	TONSL	Q96HA7	1378 aa		32.73	■■■□□ 2.83
PROCA1-208	ENST00000579650	ROBO1	Q9Y6N7	1651 aa		32.73	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms