RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-213ENST00000579609 PRKRIP1Q9H875 184 aaPredicted RBP12.22□□□□□ -0.45
PPP4R1-213ENST00000579609 FRMPD1Q5SYB0 1578 aa12.22□□□□□ -0.45
PPP4R1-213ENST00000579609 REREQ9P2R6 1566 aa12.22□□□□□ -0.45
PPP4R1-213ENST00000579609 ABCB7O75027 752 aa12.21□□□□□ -0.45
PPP4R1-213ENST00000579609 PPRC1Q5VV67 1664 aaKnown RBP12.21□□□□□ -0.45
PPP4R1-213ENST00000579609 RIMBP3CA6NJZ7 1639 aa12.21□□□□□ -0.46
PPP4R1-213ENST00000579609 RIMBP3BA6NNM3 1639 aa12.21□□□□□ -0.46
PPP4R1-213ENST00000579609 RIMBP3Q9UFD9 1639 aa12.21□□□□□ -0.46
PPP4R1-213ENST00000579609 COL17A1Q9UMD9 1497 aaPredicted RBP12.21□□□□□ -0.46
PPP4R1-213ENST00000579609 ABCA6Q8N139 1617 aa12.2□□□□□ -0.46
PPP4R1-213ENST00000579609 PELP1Q8IZL8 1130 aaKnown RBP12.2□□□□□ -0.46
PPP4R1-213ENST00000579609 C11orf95C9JLR9 678 aaPredicted RBP12.19□□□□□ -0.46
PPP4R1-213ENST00000579609 ARHGAP31Q2M1Z3 1444 aa12.19□□□□□ -0.46
PPP4R1-213ENST00000579609 DIP2CQ9Y2E4 1556 aa12.18□□□□□ -0.46
PPP4R1-213ENST00000579609 NRXN1Q9ULB1 1477 aa12.18□□□□□ -0.46
PPP4R1-213ENST00000579609 SETBP1Q9Y6X0 1596 aa12.18□□□□□ -0.46
PPP4R1-213ENST00000579609 ADGRB3O60242 1522 aa12.17□□□□□ -0.46
PPP4R1-213ENST00000579609 CAMSAP1Q5T5Y3 1602 aa12.17□□□□□ -0.46
PPP4R1-213ENST00000579609 MYO3AQ8NEV4 1616 aa12.17□□□□□ -0.46
PPP4R1-213ENST00000579609 INSRP06213 1382 aa12.17□□□□□ -0.46
PPP4R1-213ENST00000579609 SCAF11Q99590 1463 aaKnown RBP12.16□□□□□ -0.46
PPP4R1-213ENST00000579609 EIF3AQ14152 1382 aaKnown RBP12.16□□□□□ -0.46
PPP4R1-213ENST00000579609 ABCC3O15438 1527 aa12.16□□□□□ -0.46
PPP4R1-213ENST00000579609 PIK3C2BO00750 1634 aa12.15□□□□□ -0.46
PPP4R1-213ENST00000579609 DIP2BQ9P265 1576 aa12.15□□□□□ -0.46
PPP4R1-213ENST00000579609 KIF3BO15066 747 aa12.14□□□□□ -0.47
PPP4R1-213ENST00000579609 RALBP1Q15311 655 aa12.14□□□□□ -0.47
PPP4R1-213ENST00000579609 PPLO60437 1756 aa12.13□□□□□ -0.47
PPP4R1-213ENST00000579609 ST20-MTHFSA0A0A6YYL1 179 aa12.13□□□□□ -0.47
PPP4R1-213ENST00000579609 CDCA8Q53HL2 280 aa12.13□□□□□ -0.47
PPP4R1-213ENST00000579609 ZNF326Q5BKZ1 582 aaKnown RBP12.13□□□□□ -0.47
PPP4R1-213ENST00000579609 SBNO2Q9Y2G9 1366 aa12.13□□□□□ -0.47
PPP4R1-213ENST00000579609 SYNMO15061 1565 aa12.13□□□□□ -0.47
PPP4R1-213ENST00000579609 RPGRIP1LQ68CZ1 1315 aa12.12□□□□□ -0.47
PPP4R1-213ENST00000579609 AGLP35573 1532 aa12.12□□□□□ -0.47
PPP4R1-213ENST00000579609 BRD4O60885 1362 aaPredicted RBP12.12□□□□□ -0.47
PPP4R1-213ENST00000579609 NOS1P29475 1434 aa12.11□□□□□ -0.47
PPP4R1-213ENST00000579609 KDM2AQ9Y2K7 1162 aa12.11□□□□□ -0.47
PPP4R1-213ENST00000579609 MROH2AA6NES4 1674 aa12.1□□□□□ -0.47
PPP4R1-213ENST00000579609 TMF1P82094 1093 aa12.1□□□□□ -0.47
PPP4R1-213ENST00000579609 ERICH6BQ5W0A0 696 aa12.1□□□□□ -0.47
PPP4R1-213ENST00000579609 NPATQ14207 1427 aa12.1□□□□□ -0.47
PPP4R1-213ENST00000579609 ZBED9Q6R2W3 1325 aa12.1□□□□□ -0.47
PPP4R1-213ENST00000579609 TESK2Q96S53 571 aa12.09□□□□□ -0.47
PPP4R1-213ENST00000579609 KDM5AP29375 1690 aaKnown RBP12.09□□□□□ -0.47
PPP4R1-213ENST00000579609 PARD3Q8TEW0 1356 aa12.08□□□□□ -0.48
PPP4R1-213ENST00000579609 NPC1L1Q9UHC9 1359 aa12.08□□□□□ -0.48
PPP4R1-213ENST00000579609 PROM2Q8N271 834 aa12.08□□□□□ -0.48
PPP4R1-213ENST00000579609 ZFYVE9O95405 1425 aa12.08□□□□□ -0.48
PPP4R1-213ENST00000579609 MYBBP1AQ9BQG0 1328 aaKnown RBP12.08□□□□□ -0.48
PPP4R1-213ENST00000579609 RGL3Q3MIN7 710 aa12.07□□□□□ -0.48
PPP4R1-213ENST00000579609 MRS2Q9HD23 443 aa12.07□□□□□ -0.48
PPP4R1-213ENST00000579609 MYT1LQ9UL68 1186 aa12.07□□□□□ -0.48
PPP4R1-213ENST00000579609 NEFLP07196 543 aa12.06□□□□□ -0.48
PPP4R1-213ENST00000579609 SUPT16HQ9Y5B9 1047 aaKnown RBP12.06□□□□□ -0.48
PPP4R1-213ENST00000579609 LRPPRCP42704 1394 aaKnown RBP12.05□□□□□ -0.48
PPP4R1-213ENST00000579609 DSG3P32926 999 aa12.05□□□□□ -0.48
PPP4R1-213ENST00000579609 NBPF1Q3BBV0 1214 aa12.05□□□□□ -0.48
PPP4R1-213ENST00000579609 PREX1Q8TCU6 1659 aa12.05□□□□□ -0.48
PPP4R1-213ENST00000579609 PIK3C2GO75747 1445 aa12.04□□□□□ -0.48
PPP4R1-213ENST00000579609 MYOM1P52179 1685 aa12.04□□□□□ -0.48
PPP4R1-213ENST00000579609 SIGLEC1Q9BZZ2 1709 aa12.04□□□□□ -0.48
PPP4R1-213ENST00000579609 HNRNPUQ00839 825 aaKnown RBP eCLIP12.04□□□□□ -0.48
PPP4R1-213ENST00000579609 ZBTB12Q9Y330 459 aaPredicted RBP12.04□□□□□ -0.48
PPP4R1-213ENST00000579609 UGGT1Q9NYU2 1555 aa12.04□□□□□ -0.48
PPP4R1-213ENST00000579609 PER1O15534 1290 aaPredicted RBP12.03□□□□□ -0.48
PPP4R1-213ENST00000579609 CYB5RLQ6IPT4 315 aa12.03□□□□□ -0.48
PPP4R1-213ENST00000579609 PUS7Q96PZ0 661 aaKnown RBP12.03□□□□□ -0.48
PPP4R1-213ENST00000579609 NLRP13Q86W25 1043 aa12.02□□□□□ -0.49
PPP4R1-213ENST00000579609 SLC52A1Q9NWF4 448 aa12.02□□□□□ -0.49
PPP4R1-213ENST00000579609 FBXO3Q9UK99 471 aa12.02□□□□□ -0.49
PPP4R1-213ENST00000579609 DISP3Q9P2K9 1392 aa12.02□□□□□ -0.49
PPP4R1-213ENST00000579609 NEXMIFQ5QGS0 1516 aa12.01□□□□□ -0.49
PPP4R1-213ENST00000579609 ADGRB1O14514 1584 aa12.01□□□□□ -0.49
PPP4R1-213ENST00000579609 ARHGEF40Q8TER5 1519 aa12.01□□□□□ -0.49
PPP4R1-213ENST00000579609 USP32Q8NFA0 1604 aa12□□□□□ -0.49
PPP4R1-213ENST00000579609 KIF13AQ9H1H9 1805 aa12□□□□□ -0.49
PPP4R1-213ENST00000579609 PNISRQ8TF01 805 aaKnown RBP11.99□□□□□ -0.49
PPP4R1-213ENST00000579609 SMG6Q86US8 1419 aaKnown RBP11.99□□□□□ -0.49
PPP4R1-213ENST00000579609 ASXL1Q8IXJ9 1541 aa11.99□□□□□ -0.49
PPP4R1-213ENST00000579609 TMEM131LA2VDJ0 1609 aa11.98□□□□□ -0.49
PPP4R1-213ENST00000579609 QRICH2Q9H0J4 1663 aa11.97□□□□□ -0.49
PPP4R1-213ENST00000579609 SPATA31D1Q6ZQQ2 1576 aa11.97□□□□□ -0.49
PPP4R1-213ENST00000579609 ERVK-7P63135 1459 aa11.97□□□□□ -0.49
PPP4R1-213ENST00000579609 YEATS2Q9ULM3 1422 aa11.97□□□□□ -0.49
PPP4R1-213ENST00000579609 TMC1Q8TDI8 760 aa11.97□□□□□ -0.49
PPP4R1-213ENST00000579609 C14orf93Q9H972 538 aaKnown RBP11.97□□□□□ -0.49
PPP4R1-213ENST00000579609 VGFO15240 615 aaPredicted RBP11.96□□□□□ -0.49
PPP4R1-213ENST00000579609 PDE3BQ13370 1112 aa11.96□□□□□ -0.49
PPP4R1-213ENST00000579609 ARHGEF28Q8N1W1 1705 aaKnown RBP11.96□□□□□ -0.49
PPP4R1-213ENST00000579609 CCDC184Q52MB2 194 aa11.95□□□□□ -0.5
PPP4R1-213ENST00000579609 BLMP54132 1417 aaPredicted RBP11.94□□□□□ -0.5
PPP4R1-213ENST00000579609 NINLQ9Y2I6 1382 aa11.94□□□□□ -0.5
PPP4R1-213ENST00000579609 RAPGEF3O95398 923 aa11.94□□□□□ -0.5
PPP4R1-213ENST00000579609 GGT6Q6P531 493 aa11.94□□□□□ -0.5
PPP4R1-213ENST00000579609 FAM9BQ8IZU0 186 aa11.94□□□□□ -0.5
PPP4R1-213ENST00000579609 ADGRF5Q8IZF2 1346 aa11.93□□□□□ -0.5
PPP4R1-213ENST00000579609 FAM69CQ0P6D2 419 aa11.93□□□□□ -0.5
PPP4R1-213ENST00000579609 POLR3GLQ9BT43 218 aa11.93□□□□□ -0.5
PPP4R1-213ENST00000579609 CENPJQ9HC77 1338 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms