RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 HDGFP51858 240 aaKnown RBP19.3■□□□□ 0.68
CCDC57-211ENST00000578187 BCANQ96GW7 911 aa19.3■□□□□ 0.68
CCDC57-211ENST00000578187 E9PCH4 1651 aa19.29■□□□□ 0.68
CCDC57-211ENST00000578187 PPP1R15AO75807 674 aaPredicted RBP19.26■□□□□ 0.67
CCDC57-211ENST00000578187 ILDR2Q71H61 639 aa19.24■□□□□ 0.67
CCDC57-211ENST00000578187 ALKQ9UM73 1620 aa19.24■□□□□ 0.67
CCDC57-211ENST00000578187 NUP155O75694 1391 aa19.23■□□□□ 0.67
CCDC57-211ENST00000578187 CHGAP10645 457 aaKnown RBP19.23■□□□□ 0.67
CCDC57-211ENST00000578187 KCNA6P17658 529 aa19.23■□□□□ 0.67
CCDC57-211ENST00000578187 SLC26A8Q96RN1 970 aa19.23■□□□□ 0.67
CCDC57-211ENST00000578187 TMEM131LA2VDJ0 1609 aa19.22■□□□□ 0.67
CCDC57-211ENST00000578187 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.22■□□□□ 0.67
CCDC57-211ENST00000578187 MYO5BQ9ULV0 1848 aa19.21■□□□□ 0.67
CCDC57-211ENST00000578187 SOCS7O14512 581 aa19.21■□□□□ 0.67
CCDC57-211ENST00000578187 RIMS2Q9UQ26 1411 aa19.21■□□□□ 0.67
CCDC57-211ENST00000578187 NKTRP30414 1462 aaKnown RBP19.21■□□□□ 0.67
CCDC57-211ENST00000578187 XIRP1Q702N8 1843 aaKnown RBP19.21■□□□□ 0.67
CCDC57-211ENST00000578187 PLEKHG1Q9ULL1 1385 aa19.2■□□□□ 0.66
CCDC57-211ENST00000578187 MED1Q15648 1581 aaPredicted RBP19.2■□□□□ 0.66
CCDC57-211ENST00000578187 ZFYVE9O95405 1425 aa19.2■□□□□ 0.66
CCDC57-211ENST00000578187 SPHKAPQ2M3C7 1700 aa19.2■□□□□ 0.66
CCDC57-211ENST00000578187 PROSER2Q86WR7 435 aaPredicted RBP19.19■□□□□ 0.66
CCDC57-211ENST00000578187 NWD1Q149M9 1564 aa19.19■□□□□ 0.66
CCDC57-211ENST00000578187 TMEM94Q12767 1356 aa19.19■□□□□ 0.66
CCDC57-211ENST00000578187 MSH6P52701 1360 aa19.15■□□□□ 0.66
CCDC57-211ENST00000578187 DIP2AQ14689 1571 aa19.14■□□□□ 0.65
CCDC57-211ENST00000578187 FAM135BQ49AJ0 1406 aa19.12■□□□□ 0.65
CCDC57-211ENST00000578187 SETD5Q9C0A6 1442 aa19.12■□□□□ 0.65
CCDC57-211ENST00000578187 TBX22Q9Y458 520 aa19.12■□□□□ 0.65
CCDC57-211ENST00000578187 CHD2O14647 1828 aaKnown RBP19.11■□□□□ 0.65
CCDC57-211ENST00000578187 TRPM2O94759 1503 aa19.1■□□□□ 0.65
CCDC57-211ENST00000578187 RBM33Q96EV2 1170 aaKnown RBP19.09■□□□□ 0.65
CCDC57-211ENST00000578187 PIK3R4Q99570 1358 aa19.08■□□□□ 0.65
CCDC57-211ENST00000578187 ROBO1Q9Y6N7 1651 aa19.08■□□□□ 0.65
CCDC57-211ENST00000578187 NUTM2DQ5VT03 806 aaPredicted RBP19.08■□□□□ 0.64
CCDC57-211ENST00000578187 C14orf37Q86TY3 774 aa19.08■□□□□ 0.64
CCDC57-211ENST00000578187 ZNF326Q5BKZ1 582 aaKnown RBP19.07■□□□□ 0.64
CCDC57-211ENST00000578187 NCOA3Q9Y6Q9 1424 aa19.07■□□□□ 0.64
CCDC57-211ENST00000578187 TRIM52Q96A61 297 aa19.06■□□□□ 0.64
CCDC57-211ENST00000578187 CLTCL1P53675 1640 aa19.06■□□□□ 0.64
CCDC57-211ENST00000578187 RAB3GAP2Q9H2M9 1393 aa19.06■□□□□ 0.64
CCDC57-211ENST00000578187 ACIN1Q9UKV3 1341 aaKnown RBP19.05■□□□□ 0.64
CCDC57-211ENST00000578187 ADAMTS13Q76LX8 1427 aa19.05■□□□□ 0.64
CCDC57-211ENST00000578187 KIF1BO60333 1816 aa19.03■□□□□ 0.64
CCDC57-211ENST00000578187 SLAIN2Q9P270 581 aa19.03■□□□□ 0.64
CCDC57-211ENST00000578187 SLC4A1APQ9BWU0 796 aaKnown RBP19.01■□□□□ 0.63
CCDC57-211ENST00000578187 ATF3P18847 181 aa19■□□□□ 0.63
CCDC57-211ENST00000578187 CADPS2Q86UW7 1296 aa19■□□□□ 0.63
CCDC57-211ENST00000578187 SETBP1Q9Y6X0 1596 aa19■□□□□ 0.63
CCDC57-211ENST00000578187 PHLPP1O60346 1717 aa18.99■□□□□ 0.63
CCDC57-211ENST00000578187 C19orf44Q9H6X5 657 aa18.98■□□□□ 0.63
CCDC57-211ENST00000578187 AMOTL2Q9Y2J4 779 aa18.98■□□□□ 0.63
CCDC57-211ENST00000578187 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.97■□□□□ 0.63
CCDC57-211ENST00000578187 MPHOSPH9Q99550 1183 aa18.96■□□□□ 0.63
CCDC57-211ENST00000578187 NRXN3Q9Y4C0 1643 aa18.96■□□□□ 0.63
CCDC57-211ENST00000578187 HRCP23327 699 aa18.95■□□□□ 0.62
CCDC57-211ENST00000578187 NEXMIFQ5QGS0 1516 aa18.95■□□□□ 0.62
CCDC57-211ENST00000578187 XRN1Q8IZH2 1706 aaKnown RBP18.94■□□□□ 0.62
CCDC57-211ENST00000578187 JCADQ9P266 1359 aa18.93■□□□□ 0.62
CCDC57-211ENST00000578187 DCCP43146 1447 aa18.92■□□□□ 0.62
CCDC57-211ENST00000578187 PTPRUQ92729 1446 aa18.92■□□□□ 0.62
CCDC57-211ENST00000578187 VGFO15240 615 aaPredicted RBP18.91■□□□□ 0.62
CCDC57-211ENST00000578187 PPLO60437 1756 aa18.89■□□□□ 0.61
CCDC57-211ENST00000578187 RPGRIP1LQ68CZ1 1315 aa18.89■□□□□ 0.61
CCDC57-211ENST00000578187 METP08581 1390 aa18.89■□□□□ 0.61
CCDC57-211ENST00000578187 COL16A1Q07092 1604 aaPredicted RBP18.89■□□□□ 0.61
CCDC57-211ENST00000578187 IFT172Q9UG01 1749 aa18.88■□□□□ 0.61
CCDC57-211ENST00000578187 CCDC144AA2RUR9 1427 aa18.88■□□□□ 0.61
CCDC57-211ENST00000578187 AHDC1Q5TGY3 1603 aaPredicted RBP18.88■□□□□ 0.61
CCDC57-211ENST00000578187 SPATA31A6Q5VVP1 1343 aa18.85■□□□□ 0.61
CCDC57-211ENST00000578187 MSH5O43196 834 aa18.84■□□□□ 0.61
CCDC57-211ENST00000578187 SPATA31E1Q6ZUB1 1445 aa18.83■□□□□ 0.61
CCDC57-211ENST00000578187 ADGRL3Q9HAR2 1447 aa18.83■□□□□ 0.61
CCDC57-211ENST00000578187 MEX3CQ5U5Q3 659 aaKnown RBP18.83■□□□□ 0.6
CCDC57-211ENST00000578187 RGS17Q9UGC6 210 aaPredicted RBP18.83■□□□□ 0.6
CCDC57-211ENST00000578187 SHPRHQ149N8 1683 aa18.82■□□□□ 0.6
CCDC57-211ENST00000578187 BRINP3Q76B58 766 aa18.82■□□□□ 0.6
CCDC57-211ENST00000578187 ASXL1Q8IXJ9 1541 aa18.82■□□□□ 0.6
CCDC57-211ENST00000578187 PTCH1Q13635 1447 aa18.82■□□□□ 0.6
CCDC57-211ENST00000578187 TRIM26Q12899 539 aaPredicted RBP18.81■□□□□ 0.6
CCDC57-211ENST00000578187 MST1RQ04912 1400 aa18.81■□□□□ 0.6
CCDC57-211ENST00000578187 ANKRD30BQ9BXX2 1392 aa18.81■□□□□ 0.6
CCDC57-211ENST00000578187 SETD1AO15047 1707 aaKnown RBP18.8■□□□□ 0.6
CCDC57-211ENST00000578187 NALCNQ8IZF0 1738 aa18.8■□□□□ 0.6
CCDC57-211ENST00000578187 NHSL1Q5SYE7 1610 aa18.77■□□□□ 0.6
CCDC57-211ENST00000578187 POTEAQ6S8J7 498 aa18.76■□□□□ 0.59
CCDC57-211ENST00000578187 PRAG1Q86YV5 1406 aa18.75■□□□□ 0.59
CCDC57-211ENST00000578187 ZNF772Q68DY9 489 aaPredicted RBP18.75■□□□□ 0.59
CCDC57-211ENST00000578187 LRRC59Q96AG4 307 aaKnown RBP18.75■□□□□ 0.59
CCDC57-211ENST00000578187 RGL3Q3MIN7 710 aa18.74■□□□□ 0.59
CCDC57-211ENST00000578187 LRP6O75581 1613 aa18.74■□□□□ 0.59
CCDC57-211ENST00000578187 ROBO2Q9HCK4 1378 aa18.73■□□□□ 0.59
CCDC57-211ENST00000578187 MYOM2P54296 1465 aa18.71■□□□□ 0.59
CCDC57-211ENST00000578187 C1orf167Q5SNV9 1468 aa18.71■□□□□ 0.59
CCDC57-211ENST00000578187 NUTM2BA6NNL0 878 aaPredicted RBP18.71■□□□□ 0.59
CCDC57-211ENST00000578187 NUTM2EB1AL46 878 aaPredicted RBP18.71■□□□□ 0.59
CCDC57-211ENST00000578187 NUTM2AQ8IVF1 878 aaPredicted RBP18.71■□□□□ 0.59
CCDC57-211ENST00000578187 NRXN1Q9ULB1 1477 aa18.69■□□□□ 0.58
CCDC57-211ENST00000578187 ADGRF5Q8IZF2 1346 aa18.69■□□□□ 0.58
CCDC57-211ENST00000578187 LAMC1P11047 1609 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 273.9 ms