RNA–Protein interactions for RNA: ENST00000577875.5

KPNB1-204, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-204ENST00000577875 NLRP1Q9C000 1473 aa7.7□□□□□ -1.18
KPNB1-204ENST00000577875 TNRQ92752 1358 aa7.7□□□□□ -1.18
KPNB1-204ENST00000577875 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.7□□□□□ -1.187e-7■■■■■ 52.8
KPNB1-204ENST00000577875 LRRC9Q6ZRR7 1453 aa7.69□□□□□ -1.18
KPNB1-204ENST00000577875 XIRP1Q702N8 1843 aaKnown RBP7.69□□□□□ -1.18
KPNB1-204ENST00000577875 ATP7AQ04656 1500 aa7.69□□□□□ -1.18
KPNB1-204ENST00000577875 KDM5DQ9BY66 1539 aa7.69□□□□□ -1.18
KPNB1-204ENST00000577875 UGGT1Q9NYU2 1555 aa7.69□□□□□ -1.18
KPNB1-204ENST00000577875 INO80Q9ULG1 1556 aaPredicted RBP7.69□□□□□ -1.18
KPNB1-204ENST00000577875 ADGBQ8N7X0 1667 aa7.69□□□□□ -1.18
KPNB1-204ENST00000577875 ROBO1Q9Y6N7 1651 aa7.69□□□□□ -1.18
KPNB1-204ENST00000577875 A2MP01023 1474 aa7.68□□□□□ -1.18
KPNB1-204ENST00000577875 ZC3H13Q5T200 1668 aaKnown RBP7.68□□□□□ -1.18
KPNB1-204ENST00000577875 THEMISQ8N1K5 641 aaPredicted RBP7.68□□□□□ -1.18
KPNB1-204ENST00000577875 PZPP20742 1482 aa7.68□□□□□ -1.18
KPNB1-204ENST00000577875 ZNF772Q68DY9 489 aaPredicted RBP7.67□□□□□ -1.18
KPNB1-204ENST00000577875 JCADQ9P266 1359 aa7.67□□□□□ -1.18
KPNB1-204ENST00000577875 PITPNM1O00562 1244 aa7.66□□□□□ -1.18
KPNB1-204ENST00000577875 FMN1Q68DA7 1419 aa7.66□□□□□ -1.18
KPNB1-204ENST00000577875 PHLPP1O60346 1717 aa7.66□□□□□ -1.18
KPNB1-204ENST00000577875 CDC42BPAQ5VT25 1732 aa7.66□□□□□ -1.18
KPNB1-204ENST00000577875 SPAG9O60271 1321 aaKnown RBP7.65□□□□□ -1.18
KPNB1-204ENST00000577875 SYCP2Q9BX26 1530 aa7.65□□□□□ -1.18
KPNB1-204ENST00000577875 WDR70Q9NW82 654 aa7.65□□□□□ -1.18
KPNB1-204ENST00000577875 TIMELESSQ9UNS1 1208 aa7.65□□□□□ -1.18
KPNB1-204ENST00000577875 TULP1O00294 542 aaPredicted RBP7.64□□□□□ -1.19
KPNB1-204ENST00000577875 ZNF467Q7Z7K2 595 aaPredicted RBP7.64□□□□□ -1.19
KPNB1-204ENST00000577875 TRIM52Q96A61 297 aa7.64□□□□□ -1.19
KPNB1-204ENST00000577875 TSPYL2Q9H2G4 693 aaPredicted RBP7.64□□□□□ -1.19
KPNB1-204ENST00000577875 PLEKHH2Q8IVE3 1493 aa7.63□□□□□ -1.19
KPNB1-204ENST00000577875 FGD6Q6ZV73 1430 aa7.63□□□□□ -1.19
KPNB1-204ENST00000577875 SPATA31A6Q5VVP1 1343 aa7.63□□□□□ -1.19
KPNB1-204ENST00000577875 GGT6Q6P531 493 aa7.63□□□□□ -1.19
KPNB1-204ENST00000577875 CADPS2Q86UW7 1296 aa7.63□□□□□ -1.19
KPNB1-204ENST00000577875 MIA2Q96PC5 1412 aa7.62□□□□□ -1.19
KPNB1-204ENST00000577875 RXRBP28702 533 aa7.62□□□□□ -1.19
KPNB1-204ENST00000577875 KCNV2Q8TDN2 545 aa7.62□□□□□ -1.19
KPNB1-204ENST00000577875 ZRANB1Q9UGI0 708 aa7.62□□□□□ -1.19
KPNB1-204ENST00000577875 GTF3C3Q9Y5Q9 886 aa7.62□□□□□ -1.19
KPNB1-204ENST00000577875 SHPRHQ149N8 1683 aa7.62□□□□□ -1.19
KPNB1-204ENST00000577875 COL16A1Q07092 1604 aaPredicted RBP7.62□□□□□ -1.19
KPNB1-204ENST00000577875 SCAF11Q99590 1463 aaKnown RBP7.62□□□□□ -1.19
KPNB1-204ENST00000577875 KIAA1107Q9UPP5 1409 aa7.61□□□□□ -1.19
KPNB1-204ENST00000577875 LRP6O75581 1613 aa7.6□□□□□ -1.19
KPNB1-204ENST00000577875 PDAP1Q13442 181 aaKnown RBP7.6□□□□□ -1.19
KPNB1-204ENST00000577875 MEX3CQ5U5Q3 659 aaKnown RBP7.6□□□□□ -1.19
KPNB1-204ENST00000577875 CHADLQ6NUI6 762 aa7.6□□□□□ -1.19
KPNB1-204ENST00000577875 PCDHB8Q9UN66 801 aa7.6□□□□□ -1.19
KPNB1-204ENST00000577875 PCDHB13Q9Y5F0 798 aa7.6□□□□□ -1.19
KPNB1-204ENST00000577875 MAP3K1Q13233 1512 aa7.6□□□□□ -1.19
KPNB1-204ENST00000577875 CCDC18Q5T9S5 1454 aa7.6□□□□□ -1.19
KPNB1-204ENST00000577875 LRP5O75197 1615 aa7.6□□□□□ -1.19
KPNB1-204ENST00000577875 TIAM1Q13009 1591 aa7.59□□□□□ -1.19
KPNB1-204ENST00000577875 ABCC3O15438 1527 aa7.59□□□□□ -1.19
KPNB1-204ENST00000577875 LRRIQ1Q96JM4 1722 aa7.59□□□□□ -1.19
KPNB1-204ENST00000577875 RANGAP1P46060 587 aaPredicted RBP7.59□□□□□ -1.19
KPNB1-204ENST00000577875 SETBP1Q9Y6X0 1596 aa7.59□□□□□ -1.2
KPNB1-204ENST00000577875 UBR1Q8IWV7 1749 aa7.58□□□□□ -1.2
KPNB1-204ENST00000577875 NKTRP30414 1462 aaKnown RBP7.58□□□□□ -1.2
KPNB1-204ENST00000577875 LMOD2Q6P5Q4 547 aa7.58□□□□□ -1.2
KPNB1-204ENST00000577875 ATP1B4Q9UN42 357 aaPredicted RBP7.58□□□□□ -1.2
KPNB1-204ENST00000577875 TMEM94Q12767 1356 aa7.58□□□□□ -1.2
KPNB1-204ENST00000577875 ATAD2Q6PL18 1390 aa7.58□□□□□ -1.2
KPNB1-204ENST00000577875 SLIT1O75093 1534 aa7.57□□□□□ -1.2
KPNB1-204ENST00000577875 FBXO31Q5XUX0 539 aaPredicted RBP7.57□□□□□ -1.2
KPNB1-204ENST00000577875 RGS12O14924 1447 aa7.57□□□□□ -1.2
KPNB1-204ENST00000577875 EEA1Q15075 1411 aa7.57□□□□□ -1.2
KPNB1-204ENST00000577875 MSH6P52701 1360 aa7.57□□□□□ -1.2
KPNB1-204ENST00000577875 AHDC1Q5TGY3 1603 aaPredicted RBP7.56□□□□□ -1.2
KPNB1-204ENST00000577875 ARHGAP23Q9P227 1491 aa7.56□□□□□ -1.2
KPNB1-204ENST00000577875 NWD1Q149M9 1564 aa7.56□□□□□ -1.2
KPNB1-204ENST00000577875 RTEL1-TNFRSF6BF6WH68 1400 aa7.56□□□□□ -1.2
KPNB1-204ENST00000577875 TMEM132AQ24JP5 1023 aa7.56□□□□□ -1.2
KPNB1-204ENST00000577875 PRDM15P57071 1507 aaPredicted RBP7.56□□□□□ -1.2
KPNB1-204ENST00000577875 PSEN1P49768 467 aa7.55□□□□□ -1.2
KPNB1-204ENST00000577875 MFRPQ9BY79 579 aa7.55□□□□□ -1.2
KPNB1-204ENST00000577875 FARP1Q9Y4F1 1045 aaPredicted RBP7.55□□□□□ -1.2
KPNB1-204ENST00000577875 DHX29Q7Z478 1369 aaKnown RBP7.55□□□□□ -1.2
KPNB1-204ENST00000577875 WASHC2CQ9Y4E1 1318 aa7.54□□□□□ -1.2
KPNB1-204ENST00000577875 KDM5AP29375 1690 aaKnown RBP7.54□□□□□ -1.2
KPNB1-204ENST00000577875 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.54□□□□□ -1.2
KPNB1-204ENST00000577875 RBM33Q96EV2 1170 aaKnown RBP7.54□□□□□ -1.2
KPNB1-204ENST00000577875 ZNF777Q9ULD5 760 aaPredicted RBP7.54□□□□□ -1.2
KPNB1-204ENST00000577875 ERVK-7P63135 1459 aa7.54□□□□□ -1.2
KPNB1-204ENST00000577875 EP400Q96L91 3159 aa7.54□□□□□ -1.2
KPNB1-204ENST00000577875 GPATCH8Q9UKJ3 1502 aaKnown RBP7.53□□□□□ -1.2
KPNB1-204ENST00000577875 NUTM2BA6NNL0 878 aaPredicted RBP7.53□□□□□ -1.2
KPNB1-204ENST00000577875 NUTM2EB1AL46 878 aaPredicted RBP7.53□□□□□ -1.2
KPNB1-204ENST00000577875 HNRNPMP52272 730 aaKnown RBP eCLIP7.53□□□□□ -1.2
KPNB1-204ENST00000577875 RBM6P78332 1123 aaKnown RBP7.53□□□□□ -1.2
KPNB1-204ENST00000577875 NUTM2DQ5VT03 806 aaPredicted RBP7.53□□□□□ -1.2
KPNB1-204ENST00000577875 NUTM2AQ8IVF1 878 aaPredicted RBP7.53□□□□□ -1.2
KPNB1-204ENST00000577875 CAMSAP2Q08AD1 1489 aa7.53□□□□□ -1.2
KPNB1-204ENST00000577875 NCOA2Q15596 1464 aa7.53□□□□□ -1.2
KPNB1-204ENST00000577875 AFF2P51816 1311 aa7.52□□□□□ -1.2
KPNB1-204ENST00000577875 KCNA6P17658 529 aa7.52□□□□□ -1.21
KPNB1-204ENST00000577875 ZNF579Q8NAF0 562 aaKnown RBP7.52□□□□□ -1.21
KPNB1-204ENST00000577875 SLAIN2Q9P270 581 aa7.52□□□□□ -1.21
KPNB1-204ENST00000577875 EID1Q9Y6B2 187 aa7.52□□□□□ -1.21
KPNB1-204ENST00000577875 CCDC61Q9Y6R9 512 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms