RNA–Protein interactions for RNA: ENST00000577840.5

CUEDC1-207, Transcript of CUE domain containing 1, humanhuman

TSL 5 BASIC

Gene CUEDC1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-207ENST00000577840 STAC3Q96MF2 364 aa22.07■■□□□ 1.12
CUEDC1-207ENST00000577840 NLRP1Q9C000 1473 aa22.07■■□□□ 1.12
CUEDC1-207ENST00000577840 MED1Q15648 1581 aaPredicted RBP22.05■■□□□ 1.12
CUEDC1-207ENST00000577840 UBAP1LF5GYI3 381 aa22.05■■□□□ 1.12
CUEDC1-207ENST00000577840 KDM2AQ9Y2K7 1162 aa22.05■■□□□ 1.12
CUEDC1-207ENST00000577840 RPGRIP1LQ68CZ1 1315 aa22.05■■□□□ 1.12
CUEDC1-207ENST00000577840 ZNF335Q9H4Z2 1342 aaPredicted RBP22.05■■□□□ 1.12
CUEDC1-207ENST00000577840 TMEM131LA2VDJ0 1609 aa22.03■■□□□ 1.12
CUEDC1-207ENST00000577840 MYO5BQ9ULV0 1848 aa22.01■■□□□ 1.11
CUEDC1-207ENST00000577840 KDM5AP29375 1690 aaKnown RBP22■■□□□ 1.11
CUEDC1-207ENST00000577840 MYO3AQ8NEV4 1616 aa21.98■■□□□ 1.11
CUEDC1-207ENST00000577840 NCKAP5LQ9HCH0 1330 aa21.98■■□□□ 1.11
CUEDC1-207ENST00000577840 A2ML1A8K2U0 1454 aa21.97■■□□□ 1.11
CUEDC1-207ENST00000577840 HDGFP51858 240 aaKnown RBP21.97■■□□□ 1.11
CUEDC1-207ENST00000577840 IFT172Q9UG01 1749 aa21.97■■□□□ 1.11
CUEDC1-207ENST00000577840 PPLO60437 1756 aa21.97■■□□□ 1.11
CUEDC1-207ENST00000577840 VGFO15240 615 aaPredicted RBP21.96■■□□□ 1.11
CUEDC1-207ENST00000577840 UBR1Q8IWV7 1749 aa21.96■■□□□ 1.11
CUEDC1-207ENST00000577840 MYOM2P54296 1465 aa21.96■■□□□ 1.11
CUEDC1-207ENST00000577840 PRAG1Q86YV5 1406 aa21.94■■□□□ 1.1
CUEDC1-207ENST00000577840 ZNF142P52746 1687 aaPredicted RBP21.93■■□□□ 1.1
CUEDC1-207ENST00000577840 NBPF8Q3BBV2 869 aa21.93■■□□□ 1.1
CUEDC1-207ENST00000577840 NEXMIFQ5QGS0 1516 aa21.93■■□□□ 1.1
CUEDC1-207ENST00000577840 THEMISQ8N1K5 641 aaPredicted RBP21.93■■□□□ 1.1
CUEDC1-207ENST00000577840 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.93■■□□□ 1.1
CUEDC1-207ENST00000577840 CEP170BQ9Y4F5 1589 aaPredicted RBP21.92■■□□□ 1.1
CUEDC1-207ENST00000577840 HSPA1LP34931 641 aa21.91■■□□□ 1.1
CUEDC1-207ENST00000577840 RIMS2Q9UQ26 1411 aa21.9■■□□□ 1.1
CUEDC1-207ENST00000577840 ZFYVE9O95405 1425 aa21.89■■□□□ 1.09
CUEDC1-207ENST00000577840 TMEM2Q9UHN6 1383 aa21.88■■□□□ 1.09
CUEDC1-207ENST00000577840 ADGRF5Q8IZF2 1346 aa21.88■■□□□ 1.09
CUEDC1-207ENST00000577840 NUTM2DQ5VT03 806 aaPredicted RBP21.88■■□□□ 1.09
CUEDC1-207ENST00000577840 EID1Q9Y6B2 187 aa21.87■■□□□ 1.09
CUEDC1-207ENST00000577840 RALGAPBQ86X10 1494 aa21.86■■□□□ 1.09
CUEDC1-207ENST00000577840 NRXN1Q9ULB1 1477 aa21.86■■□□□ 1.09
CUEDC1-207ENST00000577840 SCAF1Q9H7N4 1312 aaKnown RBP21.85■■□□□ 1.09
CUEDC1-207ENST00000577840 TRPM1Q7Z4N2 1603 aa21.85■■□□□ 1.09
CUEDC1-207ENST00000577840 ROCK2O75116 1388 aaKnown RBP21.85■■□□□ 1.09
CUEDC1-207ENST00000577840 KIAA1210Q9ULL0 1709 aa21.84■■□□□ 1.09
CUEDC1-207ENST00000577840 PIK3C2GO75747 1445 aa21.83■■□□□ 1.09
CUEDC1-207ENST00000577840 PIP4K2BP78356 416 aa21.83■■□□□ 1.09
CUEDC1-207ENST00000577840 SLIT1O75093 1534 aa21.83■■□□□ 1.09
CUEDC1-207ENST00000577840 TXNDC2Q86VQ3 553 aa21.82■■□□□ 1.08
CUEDC1-207ENST00000577840 CARD11Q9BXL7 1154 aa21.82■■□□□ 1.08
CUEDC1-207ENST00000577840 ARHGAP23Q9P227 1491 aa21.81■■□□□ 1.08
CUEDC1-207ENST00000577840 BCANQ96GW7 911 aa21.8■■□□□ 1.08
CUEDC1-207ENST00000577840 LAMC1P11047 1609 aa21.8■■□□□ 1.08
CUEDC1-207ENST00000577840 CFAP70Q5T0N1 1121 aa21.79■■□□□ 1.08
CUEDC1-207ENST00000577840 C14orf93Q9H972 538 aaKnown RBP21.78■■□□□ 1.08
CUEDC1-207ENST00000577840 EIF4G2P78344 907 aaKnown RBP eCLIP21.77■■□□□ 1.08
CUEDC1-207ENST00000577840 ANKLE2Q86XL3 938 aa21.77■■□□□ 1.08
CUEDC1-207ENST00000577840 ALKQ9UM73 1620 aa21.77■■□□□ 1.07
CUEDC1-207ENST00000577840 GPRASP1Q5JY77 1395 aa21.76■■□□□ 1.07
CUEDC1-207ENST00000577840 NBPF1Q3BBV0 1214 aa21.76■■□□□ 1.07
CUEDC1-207ENST00000577840 SCAF11Q99590 1463 aaKnown RBP21.76■■□□□ 1.07
CUEDC1-207ENST00000577840 PLEKHG1Q9ULL1 1385 aa21.75■■□□□ 1.07
CUEDC1-207ENST00000577840 POLR1AO95602 1720 aaPredicted RBP21.75■■□□□ 1.07
CUEDC1-207ENST00000577840 LTKP29376 864 aa21.75■■□□□ 1.07
CUEDC1-207ENST00000577840 PHF23Q9BUL5 403 aaPredicted RBP21.75■■□□□ 1.07
CUEDC1-207ENST00000577840 SETBP1Q9Y6X0 1596 aa21.74■■□□□ 1.07
CUEDC1-207ENST00000577840 SENP3Q9H4L4 574 aaPredicted RBP21.73■■□□□ 1.07
CUEDC1-207ENST00000577840 CPS1P31327 1500 aa21.71■■□□□ 1.07
CUEDC1-207ENST00000577840 USP47Q96K76 1375 aa21.71■■□□□ 1.07
CUEDC1-207ENST00000577840 ZNF316A6NFI3 1004 aaPredicted RBP21.7■■□□□ 1.06
CUEDC1-207ENST00000577840 TOM1O60784 492 aa21.7■■□□□ 1.06
CUEDC1-207ENST00000577840 IQGAP1P46940 1657 aa21.69■■□□□ 1.06
CUEDC1-207ENST00000577840 HSPA5P11021 654 aaKnown RBP21.69■■□□□ 1.06
CUEDC1-207ENST00000577840 EIF3AQ14152 1382 aaKnown RBP21.68■■□□□ 1.06
CUEDC1-207ENST00000577840 NRXN3Q9Y4C0 1643 aa21.67■■□□□ 1.06
CUEDC1-207ENST00000577840 TMEM132EQ6IEE7 984 aa21.66■■□□□ 1.06
CUEDC1-207ENST00000577840 ADGRB1O14514 1584 aa21.65■■□□□ 1.06
CUEDC1-207ENST00000577840 DIP2AQ14689 1571 aa21.65■■□□□ 1.06
CUEDC1-207ENST00000577840 ADAMTS13Q76LX8 1427 aa21.63■■□□□ 1.05
CUEDC1-207ENST00000577840 HIRIP3Q9BW71 556 aaPredicted RBP21.63■■□□□ 1.05
CUEDC1-207ENST00000577840 TBX22Q9Y458 520 aa21.63■■□□□ 1.05
CUEDC1-207ENST00000577840 SETD1AO15047 1707 aaKnown RBP21.63■■□□□ 1.05
CUEDC1-207ENST00000577840 NPHP4O75161 1426 aaPredicted RBP21.63■■□□□ 1.05
CUEDC1-207ENST00000577840 TRAK1Q9UPV9 953 aa21.62■■□□□ 1.05
CUEDC1-207ENST00000577840 MED14O60244 1454 aa21.61■■□□□ 1.05
CUEDC1-207ENST00000577840 ST20-MTHFSA0A0A6YYL1 179 aa21.61■■□□□ 1.05
CUEDC1-207ENST00000577840 SLC26A8Q96RN1 970 aa21.61■■□□□ 1.05
CUEDC1-207ENST00000577840 YTHDC2Q9H6S0 1430 aaKnown RBP21.61■■□□□ 1.05
CUEDC1-207ENST00000577840 ASXL1Q8IXJ9 1541 aa21.6■■□□□ 1.05
CUEDC1-207ENST00000577840 STK26Q9P289 416 aa21.6■■□□□ 1.05
CUEDC1-207ENST00000577840 STRCP1A6NGW2 1772 aa21.59■■□□□ 1.05
CUEDC1-207ENST00000577840 METP08581 1390 aa21.59■■□□□ 1.05
CUEDC1-207ENST00000577840 LRPPRCP42704 1394 aaKnown RBP21.59■■□□□ 1.05
CUEDC1-207ENST00000577840 SLC24A1O60721 1099 aa21.58■■□□□ 1.05
CUEDC1-207ENST00000577840 RGS17Q9UGC6 210 aaPredicted RBP21.58■■□□□ 1.05
CUEDC1-207ENST00000577840 PIK3R4Q99570 1358 aa21.56■■□□□ 1.04
CUEDC1-207ENST00000577840 CENPJQ9HC77 1338 aaPredicted RBP21.55■■□□□ 1.04
CUEDC1-207ENST00000577840 ABCC11Q96J66 1382 aa21.55■■□□□ 1.04
CUEDC1-207ENST00000577840 POGKQ9P215 609 aa21.54■■□□□ 1.04
CUEDC1-207ENST00000577840 ARHGEF28Q8N1W1 1705 aaKnown RBP21.54■■□□□ 1.04
CUEDC1-207ENST00000577840 DLC1Q96QB1 1528 aa21.54■■□□□ 1.04
CUEDC1-207ENST00000577840 KNDC1Q76NI1 1749 aa21.53■■□□□ 1.04
CUEDC1-207ENST00000577840 TMF1P82094 1093 aa21.51■■□□□ 1.03
CUEDC1-207ENST00000577840 AMOTL2Q9Y2J4 779 aa21.51■■□□□ 1.03
CUEDC1-207ENST00000577840 SIRT1Q96EB6 747 aa21.5■■□□□ 1.03
CUEDC1-207ENST00000577840 QRICH2Q9H0J4 1663 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms