RNA–Protein interactions for RNA: ENST00000577802.1

CDK5RAP3-205, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 415 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-205ENST00000577802 PRAG1Q86YV5 1406 aa18.94■□□□□ 0.62
CDK5RAP3-205ENST00000577802 LAMC1P11047 1609 aa18.94■□□□□ 0.62
CDK5RAP3-205ENST00000577802 A2ML1A8K2U0 1454 aa18.94■□□□□ 0.62
CDK5RAP3-205ENST00000577802 RALGAPBQ86X10 1494 aa18.94■□□□□ 0.62
CDK5RAP3-205ENST00000577802 KIAA1210Q9ULL0 1709 aa18.94■□□□□ 0.62
CDK5RAP3-205ENST00000577802 CEP170BQ9Y4F5 1589 aaPredicted RBP18.93■□□□□ 0.62
CDK5RAP3-205ENST00000577802 TRPM1Q7Z4N2 1603 aa18.92■□□□□ 0.62
CDK5RAP3-205ENST00000577802 ZFYVE9O95405 1425 aa18.91■□□□□ 0.62
CDK5RAP3-205ENST00000577802 NRXN1Q9ULB1 1477 aa18.9■□□□□ 0.62
CDK5RAP3-205ENST00000577802 CEBPAP49715 358 aaPredicted RBP18.89■□□□□ 0.61
CDK5RAP3-205ENST00000577802 HDGFP51858 240 aaKnown RBP18.88■□□□□ 0.61
CDK5RAP3-205ENST00000577802 VGFO15240 615 aaPredicted RBP18.87■□□□□ 0.61
CDK5RAP3-205ENST00000577802 SETD1BQ9UPS6 1966 aaKnown RBP18.87■□□□□ 0.61
CDK5RAP3-205ENST00000577802 KDM2AQ9Y2K7 1162 aa18.87■□□□□ 0.61
CDK5RAP3-205ENST00000577802 PIK3C2GO75747 1445 aa18.86■□□□□ 0.61
CDK5RAP3-205ENST00000577802 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.86■□□□□ 0.61
CDK5RAP3-205ENST00000577802 SLIT1O75093 1534 aa18.85■□□□□ 0.61
CDK5RAP3-205ENST00000577802 RIMS2Q9UQ26 1411 aa18.85■□□□□ 0.61
CDK5RAP3-205ENST00000577802 SETBP1Q9Y6X0 1596 aa18.84■□□□□ 0.61
CDK5RAP3-205ENST00000577802 ROCK2O75116 1388 aaKnown RBP18.83■□□□□ 0.61
CDK5RAP3-205ENST00000577802 TMEM2Q9UHN6 1383 aa18.83■□□□□ 0.61
CDK5RAP3-205ENST00000577802 ARHGAP23Q9P227 1491 aa18.82■□□□□ 0.6
CDK5RAP3-205ENST00000577802 GPRASP1Q5JY77 1395 aa18.81■□□□□ 0.6
CDK5RAP3-205ENST00000577802 NBPF8Q3BBV2 869 aa18.81■□□□□ 0.6
CDK5RAP3-205ENST00000577802 THEMISQ8N1K5 641 aaPredicted RBP18.81■□□□□ 0.6
CDK5RAP3-205ENST00000577802 EID1Q9Y6B2 187 aa18.78■□□□□ 0.6
CDK5RAP3-205ENST00000577802 ADGRF5Q8IZF2 1346 aa18.77■□□□□ 0.6
CDK5RAP3-205ENST00000577802 DIP2AQ14689 1571 aa18.77■□□□□ 0.6
CDK5RAP3-205ENST00000577802 EIF3AQ14152 1382 aaKnown RBP18.77■□□□□ 0.6
CDK5RAP3-205ENST00000577802 SCAF11Q99590 1463 aaKnown RBP18.77■□□□□ 0.59
CDK5RAP3-205ENST00000577802 IQGAP1P46940 1657 aa18.76■□□□□ 0.59
CDK5RAP3-205ENST00000577802 POLR1AO95602 1720 aaPredicted RBP18.75■□□□□ 0.59
CDK5RAP3-205ENST00000577802 EIF4G2P78344 907 aaKnown RBP eCLIP18.75■□□□□ 0.59
CDK5RAP3-205ENST00000577802 CARD11Q9BXL7 1154 aa18.75■□□□□ 0.59
CDK5RAP3-205ENST00000577802 PLEKHG1Q9ULL1 1385 aa18.75■□□□□ 0.59
CDK5RAP3-205ENST00000577802 USP47Q96K76 1375 aa18.74■□□□□ 0.59
CDK5RAP3-205ENST00000577802 ALKQ9UM73 1620 aa18.72■□□□□ 0.59
CDK5RAP3-205ENST00000577802 NRXN3Q9Y4C0 1643 aa18.72■□□□□ 0.59
CDK5RAP3-205ENST00000577802 KDM4FA0A1W2PPD8 638 aa18.72■□□□□ 0.59
CDK5RAP3-205ENST00000577802 ADGRB1O14514 1584 aa18.72■□□□□ 0.59
CDK5RAP3-205ENST00000577802 C14orf93Q9H972 538 aaKnown RBP18.71■□□□□ 0.59
CDK5RAP3-205ENST00000577802 SETD1AO15047 1707 aaKnown RBP18.71■□□□□ 0.59
CDK5RAP3-205ENST00000577802 ZNF316A6NFI3 1004 aaPredicted RBP18.69■□□□□ 0.58
CDK5RAP3-205ENST00000577802 TXNDC2Q86VQ3 553 aa18.68■□□□□ 0.58
CDK5RAP3-205ENST00000577802 KNDC1Q76NI1 1749 aa18.67■□□□□ 0.58
CDK5RAP3-205ENST00000577802 CFAP70Q5T0N1 1121 aa18.67■□□□□ 0.58
CDK5RAP3-205ENST00000577802 NUTM2DQ5VT03 806 aaPredicted RBP18.67■□□□□ 0.58
CDK5RAP3-205ENST00000577802 ANKLE2Q86XL3 938 aa18.67■□□□□ 0.58
CDK5RAP3-205ENST00000577802 ASXL1Q8IXJ9 1541 aa18.65■□□□□ 0.58
CDK5RAP3-205ENST00000577802 ARHGEF28Q8N1W1 1705 aaKnown RBP18.64■□□□□ 0.57
CDK5RAP3-205ENST00000577802 SLC24A1O60721 1099 aa18.64■□□□□ 0.57
CDK5RAP3-205ENST00000577802 HSPA5P11021 654 aaKnown RBP18.64■□□□□ 0.57
CDK5RAP3-205ENST00000577802 NBPF1Q3BBV0 1214 aa18.64■□□□□ 0.57
CDK5RAP3-205ENST00000577802 BCANQ96GW7 911 aa18.64■□□□□ 0.57
CDK5RAP3-205ENST00000577802 MED14O60244 1454 aa18.64■□□□□ 0.57
CDK5RAP3-205ENST00000577802 LMTK3Q96Q04 1460 aa18.64■□□□□ 0.57
CDK5RAP3-205ENST00000577802 DLC1Q96QB1 1528 aa18.64■□□□□ 0.57
CDK5RAP3-205ENST00000577802 YTHDC2Q9H6S0 1430 aaKnown RBP18.62■□□□□ 0.57
CDK5RAP3-205ENST00000577802 ADAMTS13Q76LX8 1427 aa18.61■□□□□ 0.57
CDK5RAP3-205ENST00000577802 PIK3R4Q99570 1358 aa18.61■□□□□ 0.57
CDK5RAP3-205ENST00000577802 LTKP29376 864 aa18.61■□□□□ 0.57
CDK5RAP3-205ENST00000577802 QRICH2Q9H0J4 1663 aa18.6■□□□□ 0.57
CDK5RAP3-205ENST00000577802 CPS1P31327 1500 aa18.6■□□□□ 0.57
CDK5RAP3-205ENST00000577802 NPHP4O75161 1426 aaPredicted RBP18.6■□□□□ 0.57
CDK5RAP3-205ENST00000577802 LRPPRCP42704 1394 aaKnown RBP18.59■□□□□ 0.57
CDK5RAP3-205ENST00000577802 SBNO2Q9Y2G9 1366 aa18.59■□□□□ 0.57
CDK5RAP3-205ENST00000577802 TECPR2O15040 1411 aa18.58■□□□□ 0.57
CDK5RAP3-205ENST00000577802 TBX22Q9Y458 520 aa18.57■□□□□ 0.56
CDK5RAP3-205ENST00000577802 CENPJQ9HC77 1338 aaPredicted RBP18.55■□□□□ 0.56
CDK5RAP3-205ENST00000577802 XRN1Q8IZH2 1706 aaKnown RBP18.55■□□□□ 0.56
CDK5RAP3-205ENST00000577802 ST20-MTHFSA0A0A6YYL1 179 aa18.55■□□□□ 0.56
CDK5RAP3-205ENST00000577802 ABCC11Q96J66 1382 aa18.55■□□□□ 0.56
CDK5RAP3-205ENST00000577802 PTCH1Q13635 1447 aa18.54■□□□□ 0.56
CDK5RAP3-205ENST00000577802 FAM135BQ49AJ0 1406 aa18.54■□□□□ 0.56
CDK5RAP3-205ENST00000577802 CDCA8Q53HL2 280 aa18.53■□□□□ 0.56
CDK5RAP3-205ENST00000577802 TMEM132EQ6IEE7 984 aa18.53■□□□□ 0.56
CDK5RAP3-205ENST00000577802 METP08581 1390 aa18.53■□□□□ 0.56
CDK5RAP3-205ENST00000577802 TMF1P82094 1093 aa18.52■□□□□ 0.56
CDK5RAP3-205ENST00000577802 TRAK1Q9UPV9 953 aa18.52■□□□□ 0.56
CDK5RAP3-205ENST00000577802 NWD1Q149M9 1564 aa18.51■□□□□ 0.55
CDK5RAP3-205ENST00000577802 SIRT1Q96EB6 747 aa18.5■□□□□ 0.55
CDK5RAP3-205ENST00000577802 CHD2O14647 1828 aaKnown RBP18.49■□□□□ 0.55
CDK5RAP3-205ENST00000577802 HIRIP3Q9BW71 556 aaPredicted RBP18.49■□□□□ 0.55
CDK5RAP3-205ENST00000577802 CCDC7Q96M83 1385 aa18.49■□□□□ 0.55
CDK5RAP3-205ENST00000577802 SLC26A8Q96RN1 970 aa18.48■□□□□ 0.55
CDK5RAP3-205ENST00000577802 POGKQ9P215 609 aa18.48■□□□□ 0.55
CDK5RAP3-205ENST00000577802 STK26Q9P289 416 aa18.48■□□□□ 0.55
CDK5RAP3-205ENST00000577802 ADGRB2O60241 1585 aa18.47■□□□□ 0.55
CDK5RAP3-205ENST00000577802 NKTRP30414 1462 aaKnown RBP18.47■□□□□ 0.55
CDK5RAP3-205ENST00000577802 ADRA2BP18089 450 aa18.47■□□□□ 0.55
CDK5RAP3-205ENST00000577802 TESK2Q96S53 571 aa18.47■□□□□ 0.55
CDK5RAP3-205ENST00000577802 NCKAP5LQ9HCH0 1330 aa18.47■□□□□ 0.55
CDK5RAP3-205ENST00000577802 STRCQ7RTU9 1775 aa18.46■□□□□ 0.55
CDK5RAP3-205ENST00000577802 KIF7Q2M1P5 1343 aa18.45■□□□□ 0.54
CDK5RAP3-205ENST00000577802 PTPRUQ92729 1446 aa18.44■□□□□ 0.54
CDK5RAP3-205ENST00000577802 PRAM1Q96QH2 718 aa18.44■□□□□ 0.54
CDK5RAP3-205ENST00000577802 EVC2Q86UK5 1308 aa18.44■□□□□ 0.54
CDK5RAP3-205ENST00000577802 HSPA2P54652 639 aa18.43■□□□□ 0.54
CDK5RAP3-205ENST00000577802 WASHC2AQ641Q2 1341 aa18.43■□□□□ 0.54
CDK5RAP3-205ENST00000577802 DISP3Q9P2K9 1392 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms