RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 MED14O60244 1454 aa18.09■□□□□ 0.49
RARA-208ENST00000577646 CHGAP10645 457 aaKnown RBP18.09■□□□□ 0.49
RARA-208ENST00000577646 KIF1BO60333 1816 aa18.08■□□□□ 0.48
RARA-208ENST00000577646 TXNDC2Q86VQ3 553 aa18.08■□□□□ 0.48
RARA-208ENST00000577646 STAC3Q96MF2 364 aa18.07■□□□□ 0.48
RARA-208ENST00000577646 SCAF11Q99590 1463 aaKnown RBP18.07■□□□□ 0.48
RARA-208ENST00000577646 ZNF335Q9H4Z2 1342 aaPredicted RBP18.05■□□□□ 0.48
RARA-208ENST00000577646 ZFYVE9O95405 1425 aa18.05■□□□□ 0.48
RARA-208ENST00000577646 RIMS2Q9UQ26 1411 aa18.05■□□□□ 0.48
RARA-208ENST00000577646 DHX57Q6P158 1386 aaKnown RBP18.04■□□□□ 0.48
RARA-208ENST00000577646 VGFO15240 615 aaPredicted RBP18.04■□□□□ 0.48
RARA-208ENST00000577646 LTKP29376 864 aa18.04■□□□□ 0.48
RARA-208ENST00000577646 ZNF326Q5BKZ1 582 aaKnown RBP18.04■□□□□ 0.48
RARA-208ENST00000577646 POLR1AO95602 1720 aaPredicted RBP18.03■□□□□ 0.48
RARA-208ENST00000577646 SPATA31E1Q6ZUB1 1445 aa18.03■□□□□ 0.48
RARA-208ENST00000577646 IQSEC2Q5JU85 1478 aa18.02■□□□□ 0.48
RARA-208ENST00000577646 LTBP4Q8N2S1 1624 aa18.02■□□□□ 0.48
RARA-208ENST00000577646 NPHP4O75161 1426 aaPredicted RBP18.02■□□□□ 0.48
RARA-208ENST00000577646 CLSPNQ9HAW4 1339 aa18.01■□□□□ 0.47
RARA-208ENST00000577646 PPP1R15AO75807 674 aaPredicted RBP18.01■□□□□ 0.47
RARA-208ENST00000577646 PLEKHG1Q9ULL1 1385 aa18.01■□□□□ 0.47
RARA-208ENST00000577646 MYO5BQ9ULV0 1848 aa17.99■□□□□ 0.47
RARA-208ENST00000577646 IQGAP1P46940 1657 aa17.96■□□□□ 0.47
RARA-208ENST00000577646 TBX22Q9Y458 520 aa17.96■□□□□ 0.47
RARA-208ENST00000577646 NEXMIFQ5QGS0 1516 aa17.96■□□□□ 0.47
RARA-208ENST00000577646 RGL3Q3MIN7 710 aa17.95■□□□□ 0.46
RARA-208ENST00000577646 BCANQ96GW7 911 aa17.93■□□□□ 0.46
RARA-208ENST00000577646 PIK3R4Q99570 1358 aa17.92■□□□□ 0.46
RARA-208ENST00000577646 DIP2AQ14689 1571 aa17.92■□□□□ 0.46
RARA-208ENST00000577646 UBAP1LF5GYI3 381 aa17.92■□□□□ 0.46
RARA-208ENST00000577646 CPS1P31327 1500 aa17.92■□□□□ 0.46
RARA-208ENST00000577646 PPLO60437 1756 aa17.91■□□□□ 0.46
RARA-208ENST00000577646 SETBP1Q9Y6X0 1596 aa17.91■□□□□ 0.46
RARA-208ENST00000577646 MYOM2P54296 1465 aa17.9■□□□□ 0.46
RARA-208ENST00000577646 TIMELESSQ9UNS1 1208 aa17.89■□□□□ 0.45
RARA-208ENST00000577646 IFT172Q9UG01 1749 aa17.89■□□□□ 0.45
RARA-208ENST00000577646 NUTM2DQ5VT03 806 aaPredicted RBP17.87■□□□□ 0.45
RARA-208ENST00000577646 DCAF11Q8TEB1 546 aa17.87■□□□□ 0.45
RARA-208ENST00000577646 SLC26A8Q96RN1 970 aa17.87■□□□□ 0.45
RARA-208ENST00000577646 ADAMTS13Q76LX8 1427 aa17.87■□□□□ 0.45
RARA-208ENST00000577646 NRXN1Q9ULB1 1477 aa17.87■□□□□ 0.45
RARA-208ENST00000577646 TOM1O60784 492 aa17.86■□□□□ 0.45
RARA-208ENST00000577646 KCNA6P17658 529 aa17.86■□□□□ 0.45
RARA-208ENST00000577646 SIN3AQ96ST3 1273 aa17.86■□□□□ 0.45
RARA-208ENST00000577646 ADGRF5Q8IZF2 1346 aa17.84■□□□□ 0.45
RARA-208ENST00000577646 NEUROD1Q13562 356 aa17.84■□□□□ 0.45
RARA-208ENST00000577646 CCER1Q8TC90 406 aaPredicted RBP17.84■□□□□ 0.45
RARA-208ENST00000577646 PIK3C2GO75747 1445 aa17.83■□□□□ 0.45
RARA-208ENST00000577646 C14orf93Q9H972 538 aaKnown RBP17.83■□□□□ 0.44
RARA-208ENST00000577646 SCAF1Q9H7N4 1312 aaKnown RBP17.82■□□□□ 0.44
RARA-208ENST00000577646 L3MBTL2Q969R5 705 aa17.82■□□□□ 0.44
RARA-208ENST00000577646 NRXN3Q9Y4C0 1643 aa17.81■□□□□ 0.44
RARA-208ENST00000577646 TONSLQ96HA7 1378 aa17.8■□□□□ 0.44
RARA-208ENST00000577646 LAMC1P11047 1609 aa17.8■□□□□ 0.44
RARA-208ENST00000577646 ALKQ9UM73 1620 aa17.8■□□□□ 0.44
RARA-208ENST00000577646 KDM2AQ9Y2K7 1162 aa17.8■□□□□ 0.44
RARA-208ENST00000577646 PIP4K2BP78356 416 aa17.79■□□□□ 0.44
RARA-208ENST00000577646 NKTRP30414 1462 aaKnown RBP17.79■□□□□ 0.44
RARA-208ENST00000577646 CHD2O14647 1828 aaKnown RBP17.79■□□□□ 0.44
RARA-208ENST00000577646 NCOA3Q9Y6Q9 1424 aa17.78■□□□□ 0.44
RARA-208ENST00000577646 NWD1Q149M9 1564 aa17.78■□□□□ 0.44
RARA-208ENST00000577646 LRRC7Q96NW7 1537 aa17.77■□□□□ 0.44
RARA-208ENST00000577646 SENP3Q9H4L4 574 aaPredicted RBP17.77■□□□□ 0.44
RARA-208ENST00000577646 AMOTL2Q9Y2J4 779 aa17.77■□□□□ 0.44
RARA-208ENST00000577646 PRAG1Q86YV5 1406 aa17.77■□□□□ 0.44
RARA-208ENST00000577646 SIRT1Q96EB6 747 aa17.76■□□□□ 0.43
RARA-208ENST00000577646 METP08581 1390 aa17.76■□□□□ 0.43
RARA-208ENST00000577646 STRCP1A6NGW2 1772 aa17.74■□□□□ 0.43
RARA-208ENST00000577646 CFAP70Q5T0N1 1121 aa17.74■□□□□ 0.43
RARA-208ENST00000577646 PROSER2Q86WR7 435 aaPredicted RBP17.74■□□□□ 0.43
RARA-208ENST00000577646 SETD1AO15047 1707 aaKnown RBP17.74■□□□□ 0.43
RARA-208ENST00000577646 ABCC11Q96J66 1382 aa17.74■□□□□ 0.43
RARA-208ENST00000577646 KIAA1210Q9ULL0 1709 aa17.73■□□□□ 0.43
RARA-208ENST00000577646 LRPPRCP42704 1394 aaKnown RBP17.73■□□□□ 0.43
RARA-208ENST00000577646 PTPRUQ92729 1446 aa17.72■□□□□ 0.43
RARA-208ENST00000577646 HSPA1LP34931 641 aa17.71■□□□□ 0.43
RARA-208ENST00000577646 TECPR2O15040 1411 aa17.71■□□□□ 0.43
RARA-208ENST00000577646 PTCH1Q13635 1447 aa17.71■□□□□ 0.43
RARA-208ENST00000577646 XRN1Q8IZH2 1706 aaKnown RBP17.7■□□□□ 0.42
RARA-208ENST00000577646 YTHDC2Q9H6S0 1430 aaKnown RBP17.7■□□□□ 0.42
RARA-208ENST00000577646 TMEM94Q12767 1356 aa17.69■□□□□ 0.42
RARA-208ENST00000577646 FAM135BQ49AJ0 1406 aa17.68■□□□□ 0.42
RARA-208ENST00000577646 TMEM132EQ6IEE7 984 aa17.67■□□□□ 0.42
RARA-208ENST00000577646 ADGRB1O14514 1584 aa17.66■□□□□ 0.42
RARA-208ENST00000577646 C19orf44Q9H6X5 657 aa17.66■□□□□ 0.42
RARA-208ENST00000577646 DLC1Q96QB1 1528 aa17.66■□□□□ 0.42
RARA-208ENST00000577646 KNDC1Q76NI1 1749 aa17.65■□□□□ 0.42
RARA-208ENST00000577646 RBM33Q96EV2 1170 aaKnown RBP17.65■□□□□ 0.42
RARA-208ENST00000577646 ASXL1Q8IXJ9 1541 aa17.64■□□□□ 0.41
RARA-208ENST00000577646 MSH6P52701 1360 aa17.64■□□□□ 0.41
RARA-208ENST00000577646 C14orf37Q86TY3 774 aa17.63■□□□□ 0.41
RARA-208ENST00000577646 STK26Q9P289 416 aa17.63■□□□□ 0.41
RARA-208ENST00000577646 ROBO2Q9HCK4 1378 aa17.63■□□□□ 0.41
RARA-208ENST00000577646 DCCP43146 1447 aa17.63■□□□□ 0.41
RARA-208ENST00000577646 GPRASP1Q5JY77 1395 aa17.62■□□□□ 0.41
RARA-208ENST00000577646 TRPM1Q7Z4N2 1603 aa17.61■□□□□ 0.41
RARA-208ENST00000577646 NBPF8Q3BBV2 869 aa17.61■□□□□ 0.41
RARA-208ENST00000577646 CADPS2Q86UW7 1296 aa17.61■□□□□ 0.41
RARA-208ENST00000577646 NBPF1Q3BBV0 1214 aa17.6■□□□□ 0.41
RARA-208ENST00000577646 ROCK2O75116 1388 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms