RNA–Protein interactions for RNA: ENST00000574957.1

THOC6-208, Transcript of THO complex 6, human

TSL 1 (best)

Gene THOC6, Length 1,143 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
THOC6-208	ENST00000574957	PROSER2	Q86WR7	435 aa	Predicted RBP	32.77	■■■□□ 2.84
THOC6-208	ENST00000574957	NKTR	P30414	1462 aa	Known RBP	32.77	■■■□□ 2.84
THOC6-208	ENST00000574957	MYO5B	Q9ULV0	1848 aa		32.77	■■■□□ 2.84
THOC6-208	ENST00000574957	FAM50A	Q14320	339 aa	Known RBP	32.75	■■■□□ 2.83
THOC6-208	ENST00000574957	ZFYVE9	O95405	1425 aa		32.73	■■■□□ 2.83
THOC6-208	ENST00000574957	GCC2	Q8IWJ2	1684 aa		32.72	■■■□□ 2.83
THOC6-208	ENST00000574957	BCAN	Q96GW7	911 aa		32.69	■■■□□ 2.82
THOC6-208	ENST00000574957	TMEM131L	A2VDJ0	1609 aa		32.68	■■■□□ 2.82
THOC6-208	ENST00000574957	PLEKHG1	Q9ULL1	1385 aa		32.68	■■■□□ 2.82
THOC6-208	ENST00000574957	CHD2	O14647	1828 aa	Known RBP	32.67	■■■□□ 2.82
THOC6-208	ENST00000574957	UNC13B	O14795	1591 aa		32.66	■■■□□ 2.82
THOC6-208	ENST00000574957	RIMS2	Q9UQ26	1411 aa		32.66	■■■□□ 2.82
THOC6-208	ENST00000574957	MSH6	P52701	1360 aa		32.65	■■■□□ 2.82
THOC6-208	ENST00000574957	PPP1R15A	O75807	674 aa	Predicted RBP	32.6	■■■□□ 2.81
THOC6-208	ENST00000574957		E9PCH4	1651 aa		32.59	■■■□□ 2.81
THOC6-208	ENST00000574957	PHLPP1	O60346	1717 aa		32.58	■■■□□ 2.81
THOC6-208	ENST00000574957	POTEA	Q6S8J7	498 aa		32.57	■■■□□ 2.8
THOC6-208	ENST00000574957	SLAIN2	Q9P270	581 aa		32.57	■■■□□ 2.8
THOC6-208	ENST00000574957	HDGF	P51858	240 aa	Known RBP	32.56	■■■□□ 2.8
THOC6-208	ENST00000574957	TBX22	Q9Y458	520 aa		32.54	■■■□□ 2.8
THOC6-208	ENST00000574957	IQGAP3	Q86VI3	1631 aa		32.53	■■■□□ 2.8
THOC6-208	ENST00000574957	ADAMTS13	Q76LX8	1427 aa		32.52	■■■□□ 2.8
THOC6-208	ENST00000574957	CHGA	P10645	457 aa	Known RBP	32.52	■■■□□ 2.8
THOC6-208	ENST00000574957	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.51	■■■□□ 2.79
THOC6-208	ENST00000574957	ROCK1	Q13464	1354 aa		32.49	■■■□□ 2.79
THOC6-208	ENST00000574957	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.49	■■■□□ 2.79
THOC6-208	ENST00000574957	NCOA3	Q9Y6Q9	1424 aa		32.49	■■■□□ 2.79
THOC6-208	ENST00000574957	DIP2A	Q14689	1571 aa		32.49	■■■□□ 2.79
THOC6-208	ENST00000574957	COL16A1	Q07092	1604 aa	Predicted RBP	32.48	■■■□□ 2.79
THOC6-208	ENST00000574957	JCAD	Q9P266	1359 aa		32.48	■■■□□ 2.79
THOC6-208	ENST00000574957	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.45	■■■□□ 2.78
THOC6-208	ENST00000574957	PIK3R4	Q99570	1358 aa		32.43	■■■□□ 2.78
THOC6-208	ENST00000574957	C14orf37	Q86TY3	774 aa		32.41	■■■□□ 2.78
THOC6-208	ENST00000574957	NUP155	O75694	1391 aa		32.4	■■■□□ 2.78
THOC6-208	ENST00000574957	TRPM2	O94759	1503 aa		32.39	■■■□□ 2.78
THOC6-208	ENST00000574957	SETD1A	O15047	1707 aa	Known RBP	32.38	■■■□□ 2.77
THOC6-208	ENST00000574957	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.37	■■■□□ 2.77
THOC6-208	ENST00000574957	PTPRU	Q92729	1446 aa		32.36	■■■□□ 2.77
THOC6-208	ENST00000574957	C19orf44	Q9H6X5	657 aa		32.36	■■■□□ 2.77
THOC6-208	ENST00000574957	LRP6	O75581	1613 aa		32.36	■■■□□ 2.77
THOC6-208	ENST00000574957	CADPS2	Q86UW7	1296 aa		32.35	■■■□□ 2.77
THOC6-208	ENST00000574957	NRXN3	Q9Y4C0	1643 aa		32.33	■■■□□ 2.77
THOC6-208	ENST00000574957	ATF3	P18847	181 aa		32.32	■■■□□ 2.76
THOC6-208	ENST00000574957	ITGAE	P38570	1179 aa		32.32	■■■□□ 2.76
THOC6-208	ENST00000574957	AMOTL2	Q9Y2J4	779 aa		32.32	■■■□□ 2.76
THOC6-208	ENST00000574957	SPHKAP	Q2M3C7	1700 aa		32.31	■■■□□ 2.76
THOC6-208	ENST00000574957	SHPRH	Q149N8	1683 aa		32.31	■■■□□ 2.76
THOC6-208	ENST00000574957	SPATA31A6	Q5VVP1	1343 aa		32.3	■■■□□ 2.76
THOC6-208	ENST00000574957	XRN1	Q8IZH2	1706 aa	Known RBP	32.29	■■■□□ 2.76
THOC6-208	ENST00000574957	SETBP1	Q9Y6X0	1596 aa		32.27	■■■□□ 2.76
THOC6-208	ENST00000574957	BRINP3	Q76B58	766 aa		32.24	■■■□□ 2.75
THOC6-208	ENST00000574957	DCC	P43146	1447 aa		32.24	■■■□□ 2.75
THOC6-208	ENST00000574957	MEX3C	Q5U5Q3	659 aa	Known RBP	32.22	■■■□□ 2.75
THOC6-208	ENST00000574957	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.19	■■■□□ 2.74
THOC6-208	ENST00000574957	ASXL1	Q8IXJ9	1541 aa		32.19	■■■□□ 2.74
THOC6-208	ENST00000574957	ZNF326	Q5BKZ1	582 aa	Known RBP	32.17	■■■□□ 2.74
THOC6-208	ENST00000574957	ZNF772	Q68DY9	489 aa	Predicted RBP	32.17	■■■□□ 2.74
THOC6-208	ENST00000574957	MET	P08581	1390 aa		32.17	■■■□□ 2.74
THOC6-208	ENST00000574957	MST1R	Q04912	1400 aa		32.17	■■■□□ 2.74
THOC6-208	ENST00000574957	CLTCL1	P53675	1640 aa		32.16	■■■□□ 2.74
THOC6-208	ENST00000574957	NHSL1	Q5SYE7	1610 aa		32.15	■■■□□ 2.74
THOC6-208	ENST00000574957	NEXMIF	Q5QGS0	1516 aa		32.14	■■■□□ 2.74
THOC6-208	ENST00000574957	SETD5	Q9C0A6	1442 aa		32.11	■■■□□ 2.73
THOC6-208	ENST00000574957	TRIM52	Q96A61	297 aa		32.1	■■■□□ 2.73
THOC6-208	ENST00000574957	NALCN	Q8IZF0	1738 aa		32.09	■■■□□ 2.73
THOC6-208	ENST00000574957	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.09	■■■□□ 2.73
THOC6-208	ENST00000574957	NUTM2E	B1AL46	878 aa	Predicted RBP	32.09	■■■□□ 2.73
THOC6-208	ENST00000574957	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.09	■■■□□ 2.73
THOC6-208	ENST00000574957	ADGRL3	Q9HAR2	1447 aa		32.09	■■■□□ 2.73
THOC6-208	ENST00000574957	KIF1B	O60333	1816 aa		32.07	■■■□□ 2.72
THOC6-208	ENST00000574957	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.04	■■■□□ 2.72
THOC6-208	ENST00000574957	RXRB	P28702	533 aa		32.02	■■■□□ 2.72
THOC6-208	ENST00000574957	DDX17	Q92841	729 aa	Known RBP	32.02	■■■□□ 2.72
THOC6-208	ENST00000574957	NAIP	Q13075	1403 aa		32.01	■■■□□ 2.72
THOC6-208	ENST00000574957	AFF2	P51816	1311 aa		32	■■■□□ 2.71
THOC6-208	ENST00000574957	LRRC59	Q96AG4	307 aa	Known RBP	32	■■■□□ 2.71
THOC6-208	ENST00000574957	RRBP1	Q9P2E9	1410 aa	Known RBP	32	■■■□□ 2.71
THOC6-208	ENST00000574957	CDK12	Q9NYV4	1490 aa	Predicted RBP	31.98	■■■□□ 2.71
THOC6-208	ENST00000574957	PNPLA6	Q8IY17	1366 aa		31.97	■■■□□ 2.71
THOC6-208	ENST00000574957	PTCH1	Q13635	1447 aa		31.94	■■■□□ 2.7
THOC6-208	ENST00000574957	C1orf167	Q5SNV9	1468 aa		31.94	■■■□□ 2.7
THOC6-208	ENST00000574957	LAMC1	P11047	1609 aa		31.92	■■■□□ 2.7
THOC6-208	ENST00000574957	ROBO2	Q9HCK4	1378 aa		31.91	■■■□□ 2.7
THOC6-208	ENST00000574957	C8orf37	Q96NL8	207 aa		31.9	■■■□□ 2.7
THOC6-208	ENST00000574957	VGF	O15240	615 aa	Predicted RBP	31.88	■■■□□ 2.69
THOC6-208	ENST00000574957	PRAG1	Q86YV5	1406 aa		31.88	■■■□□ 2.69
THOC6-208	ENST00000574957	RGS12	O14924	1447 aa		31.86	■■■□□ 2.69
THOC6-208	ENST00000574957	PPL	O60437	1756 aa		31.86	■■■□□ 2.69
THOC6-208	ENST00000574957	ORAI2	Q96SN7	254 aa		31.84	■■■□□ 2.69
THOC6-208	ENST00000574957	QTRT2	Q9H974	415 aa	Known RBP	31.84	■■■□□ 2.69
THOC6-208	ENST00000574957	HFM1	A2PYH4	1435 aa		31.83	■■■□□ 2.69
THOC6-208	ENST00000574957	SOS2	Q07890	1332 aa	Predicted RBP	31.82	■■■□□ 2.68
THOC6-208	ENST00000574957	RPGRIP1L	Q68CZ1	1315 aa		31.82	■■■□□ 2.68
THOC6-208	ENST00000574957	RBM6	P78332	1123 aa	Known RBP	31.82	■■■□□ 2.68
THOC6-208	ENST00000574957	ADAMTS2	O95450	1211 aa		31.8	■■■□□ 2.68
THOC6-208	ENST00000574957	SLC4A1AP	Q9BWU0	796 aa	Known RBP	31.79	■■■□□ 2.68
THOC6-208	ENST00000574957	NGLY1	Q96IV0	654 aa		31.77	■■■□□ 2.68
THOC6-208	ENST00000574957	COL22A1	Q8NFW1	1626 aa	Predicted RBP	31.73	■■■□□ 2.67
THOC6-208	ENST00000574957	CDC42BPG	Q6DT37	1551 aa		31.73	■■■□□ 2.67
THOC6-208	ENST00000574957	FOXD1	Q16676	465 aa		31.69	■■■□□ 2.66

Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms