RNA–Protein interactions for RNA: ENST00000574875.1

ABR-231, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 2

Gene ABR, Length 239 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-231	ENST00000574875	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	29.23	■■■□□ 2.27
ABR-231	ENST00000574875	ZFYVE9	O95405	1425 aa		29.22	■■■□□ 2.27
ABR-231	ENST00000574875	PPP1R15A	O75807	674 aa	Predicted RBP	29.22	■■■□□ 2.27
ABR-231	ENST00000574875	LRRC7	Q96NW7	1537 aa		29.2	■■■□□ 2.27
ABR-231	ENST00000574875	SENP3	Q9H4L4	574 aa	Predicted RBP	29.2	■■■□□ 2.26
ABR-231	ENST00000574875	KCNA6	P17658	529 aa		29.18	■■■□□ 2.26
ABR-231	ENST00000574875	PLEKHG1	Q9ULL1	1385 aa		29.17	■■■□□ 2.26
ABR-231	ENST00000574875	PIP4K2B	P78356	416 aa		29.17	■■■□□ 2.26
ABR-231	ENST00000574875	NUTM2D	Q5VT03	806 aa	Predicted RBP	29.17	■■■□□ 2.26
ABR-231	ENST00000574875	SPHKAP	Q2M3C7	1700 aa		29.17	■■■□□ 2.26
ABR-231	ENST00000574875	SCAF1	Q9H7N4	1312 aa	Known RBP	29.16	■■■□□ 2.26
ABR-231	ENST00000574875	SLC4A1AP	Q9BWU0	796 aa	Known RBP	29.15	■■■□□ 2.26
ABR-231	ENST00000574875	TBX22	Q9Y458	520 aa		29.11	■■■□□ 2.25
ABR-231	ENST00000574875	ZNF326	Q5BKZ1	582 aa	Known RBP	29.1	■■■□□ 2.25
ABR-231	ENST00000574875	PROSER2	Q86WR7	435 aa	Predicted RBP	29.09	■■■□□ 2.25
ABR-231	ENST00000574875	TRPM2	O94759	1503 aa		29.04	■■■□□ 2.24
ABR-231	ENST00000574875	TMEM94	Q12767	1356 aa		29.03	■■■□□ 2.24
ABR-231	ENST00000574875	XIRP1	Q702N8	1843 aa	Known RBP	29.03	■■■□□ 2.24
ABR-231	ENST00000574875	CLTCL1	P53675	1640 aa		29.02	■■■□□ 2.24
ABR-231	ENST00000574875	ALK	Q9UM73	1620 aa		29.02	■■■□□ 2.24
ABR-231	ENST00000574875	HSPA1L	P34931	641 aa		29.02	■■■□□ 2.24
ABR-231	ENST00000574875	RBM33	Q96EV2	1170 aa	Known RBP	29.02	■■■□□ 2.24
ABR-231	ENST00000574875	ADAMTS13	Q76LX8	1427 aa		29.01	■■■□□ 2.23
ABR-231	ENST00000574875	CHD2	O14647	1828 aa	Known RBP	29	■■■□□ 2.23
ABR-231	ENST00000574875	MPHOSPH9	Q99550	1183 aa		29	■■■□□ 2.23
ABR-231	ENST00000574875	ACIN1	Q9UKV3	1341 aa	Known RBP	28.99	■■■□□ 2.23
ABR-231	ENST00000574875	FOXD1	Q16676	465 aa		28.99	■■■□□ 2.23
ABR-231	ENST00000574875	KIF1B	O60333	1816 aa		28.99	■■■□□ 2.23
ABR-231	ENST00000574875	NWD1	Q149M9	1564 aa		28.98	■■■□□ 2.23
ABR-231	ENST00000574875	NKTR	P30414	1462 aa	Known RBP	28.97	■■■□□ 2.23
ABR-231	ENST00000574875	SETD5	Q9C0A6	1442 aa		28.97	■■■□□ 2.23
ABR-231	ENST00000574875	PIK3R4	Q99570	1358 aa		28.95	■■■□□ 2.22
ABR-231	ENST00000574875	DIP2A	Q14689	1571 aa		28.94	■■■□□ 2.22
ABR-231	ENST00000574875	DISP3	Q9P2K9	1392 aa		28.91	■■■□□ 2.22
ABR-231	ENST00000574875	AMOTL2	Q9Y2J4	779 aa		28.91	■■■□□ 2.22
ABR-231	ENST00000574875	VGF	O15240	615 aa	Predicted RBP	28.9	■■■□□ 2.22
ABR-231	ENST00000574875	RPGRIP1L	Q68CZ1	1315 aa		28.9	■■■□□ 2.22
ABR-231	ENST00000574875	NEXMIF	Q5QGS0	1516 aa		28.89	■■■□□ 2.22
ABR-231	ENST00000574875	MSH6	P52701	1360 aa		28.88	■■■□□ 2.21
ABR-231	ENST00000574875	SETBP1	Q9Y6X0	1596 aa		28.87	■■■□□ 2.21
ABR-231	ENST00000574875	NRXN3	Q9Y4C0	1643 aa		28.85	■■■□□ 2.21
ABR-231	ENST00000574875	C14orf37	Q86TY3	774 aa		28.85	■■■□□ 2.21
ABR-231	ENST00000574875	RAB3GAP2	Q9H2M9	1393 aa		28.85	■■■□□ 2.21
ABR-231	ENST00000574875	PTPRU	Q92729	1446 aa		28.85	■■■□□ 2.21
ABR-231	ENST00000574875	NCOA3	Q9Y6Q9	1424 aa		28.85	■■■□□ 2.21
ABR-231	ENST00000574875	CCDC144A	A2RUR9	1427 aa		28.84	■■■□□ 2.21
ABR-231	ENST00000574875	ILDR2	Q71H61	639 aa		28.83	■■■□□ 2.21
ABR-231	ENST00000574875	FAM135B	Q49AJ0	1406 aa		28.83	■■■□□ 2.21
ABR-231	ENST00000574875	MET	P08581	1390 aa		28.81	■■■□□ 2.2
ABR-231	ENST00000574875	SLAIN2	Q9P270	581 aa		28.81	■■■□□ 2.2
ABR-231	ENST00000574875	RGL3	Q3MIN7	710 aa		28.8	■■■□□ 2.2
ABR-231	ENST00000574875	C19orf44	Q9H6X5	657 aa		28.79	■■■□□ 2.2
ABR-231	ENST00000574875	SOCS7	O14512	581 aa		28.76	■■■□□ 2.19
ABR-231	ENST00000574875	ATF3	P18847	181 aa		28.74	■■■□□ 2.19
ABR-231	ENST00000574875	HRC	P23327	699 aa		28.74	■■■□□ 2.19
ABR-231	ENST00000574875	CADPS2	Q86UW7	1296 aa		28.74	■■■□□ 2.19
ABR-231	ENST00000574875	PPL	O60437	1756 aa		28.73	■■■□□ 2.19
ABR-231	ENST00000574875	SPATA31E1	Q6ZUB1	1445 aa		28.72	■■■□□ 2.19
ABR-231	ENST00000574875	XRN1	Q8IZH2	1706 aa	Known RBP	28.72	■■■□□ 2.19
ABR-231	ENST00000574875	ROBO1	Q9Y6N7	1651 aa		28.7	■■■□□ 2.19
ABR-231	ENST00000574875	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	28.69	■■■□□ 2.18
ABR-231	ENST00000574875	ADGRF5	Q8IZF2	1346 aa		28.69	■■■□□ 2.18
ABR-231	ENST00000574875	ANKRD30B	Q9BXX2	1392 aa		28.67	■■■□□ 2.18
ABR-231	ENST00000574875	SETD1A	O15047	1707 aa	Known RBP	28.63	■■■□□ 2.17
ABR-231	ENST00000574875	MED1	Q15648	1581 aa	Predicted RBP	28.62	■■■□□ 2.17
ABR-231	ENST00000574875	DCC	P43146	1447 aa		28.59	■■■□□ 2.17
ABR-231	ENST00000574875	IFT172	Q9UG01	1749 aa		28.58	■■■□□ 2.17
ABR-231	ENST00000574875	ROBO2	Q9HCK4	1378 aa		28.58	■■■□□ 2.17
ABR-231	ENST00000574875	ADGRL3	Q9HAR2	1447 aa		28.56	■■■□□ 2.16
ABR-231	ENST00000574875	PTCH1	Q13635	1447 aa		28.55	■■■□□ 2.16
ABR-231	ENST00000574875	PHF23	Q9BUL5	403 aa	Predicted RBP	28.55	■■■□□ 2.16
ABR-231	ENST00000574875	BRINP3	Q76B58	766 aa		28.54	■■■□□ 2.16
ABR-231	ENST00000574875	PHLPP1	O60346	1717 aa		28.54	■■■□□ 2.16
ABR-231	ENST00000574875	TMEM132E	Q6IEE7	984 aa		28.53	■■■□□ 2.16
ABR-231	ENST00000574875	STK26	Q9P289	416 aa		28.53	■■■□□ 2.16
ABR-231	ENST00000574875	PIK3C2G	O75747	1445 aa		28.52	■■■□□ 2.16
ABR-231	ENST00000574875	PRAG1	Q86YV5	1406 aa		28.52	■■■□□ 2.16
ABR-231	ENST00000574875	C14orf93	Q9H972	538 aa	Known RBP	28.51	■■■□□ 2.15
ABR-231	ENST00000574875	MST1R	Q04912	1400 aa		28.51	■■■□□ 2.15
ABR-231	ENST00000574875	NALCN	Q8IZF0	1738 aa		28.49	■■■□□ 2.15
ABR-231	ENST00000574875	LRPPRC	P42704	1394 aa	Known RBP	28.48	■■■□□ 2.15
ABR-231	ENST00000574875	JCAD	Q9P266	1359 aa		28.48	■■■□□ 2.15
ABR-231	ENST00000574875	CFAP70	Q5T0N1	1121 aa		28.46	■■■□□ 2.15
ABR-231	ENST00000574875	ABCC11	Q96J66	1382 aa		28.46	■■■□□ 2.15
ABR-231	ENST00000574875	WAPL	Q7Z5K2	1190 aa		28.45	■■■□□ 2.14
ABR-231	ENST00000574875	MYOM2	P54296	1465 aa		28.45	■■■□□ 2.14
ABR-231	ENST00000574875	KDM2A	Q9Y2K7	1162 aa		28.44	■■■□□ 2.14
ABR-231	ENST00000574875	NRXN1	Q9ULB1	1477 aa		28.44	■■■□□ 2.14
ABR-231	ENST00000574875	COL16A1	Q07092	1604 aa	Predicted RBP	28.43	■■■□□ 2.14
ABR-231	ENST00000574875	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.43	■■■□□ 2.14
ABR-231	ENST00000574875	DCAF11	Q8TEB1	546 aa		28.43	■■■□□ 2.14
ABR-231	ENST00000574875	TECPR2	O15040	1411 aa		28.42	■■■□□ 2.14
ABR-231	ENST00000574875	ASXL1	Q8IXJ9	1541 aa		28.41	■■■□□ 2.14
ABR-231	ENST00000574875	YTHDC2	Q9H6S0	1430 aa	Known RBP	28.41	■■■□□ 2.14
ABR-231	ENST00000574875	DHX57	Q6P158	1386 aa	Known RBP	28.4	■■■□□ 2.14
ABR-231	ENST00000574875	TRIM26	Q12899	539 aa	Predicted RBP	28.4	■■■□□ 2.14
ABR-231	ENST00000574875	SIRT1	Q96EB6	747 aa		28.4	■■■□□ 2.14
ABR-231	ENST00000574875	STAC3	Q96MF2	364 aa		28.4	■■■□□ 2.14
ABR-231	ENST00000574875	C1orf167	Q5SNV9	1468 aa		28.4	■■■□□ 2.14
ABR-231	ENST00000574875	ORAI2	Q96SN7	254 aa		28.37	■■■□□ 2.13

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