RNA–Protein interactions for RNA: ENST00000574224.1

ABCC1-205, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 1 (best)

Gene ABCC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-205ENST00000574224 SLIT1O75093 1534 aa17.37■□□□□ 0.37
ABCC1-205ENST00000574224 ARHGAP23Q9P227 1491 aa17.37■□□□□ 0.37
ABCC1-205ENST00000574224 LTKP29376 864 aa17.37■□□□□ 0.37
ABCC1-205ENST00000574224 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.37■□□□□ 0.37
ABCC1-205ENST00000574224 TRPM2O94759 1503 aa17.36■□□□□ 0.37
ABCC1-205ENST00000574224 MED14O60244 1454 aa17.34■□□□□ 0.37
ABCC1-205ENST00000574224 KDM5AP29375 1690 aaKnown RBP17.34■□□□□ 0.37
ABCC1-205ENST00000574224 NEURL4Q96JN8 1562 aa17.34■□□□□ 0.37
ABCC1-205ENST00000574224 RIMS2Q9UQ26 1411 aa17.34■□□□□ 0.37
ABCC1-205ENST00000574224 ZNF335Q9H4Z2 1342 aaPredicted RBP17.34■□□□□ 0.37
ABCC1-205ENST00000574224 POLR1AO95602 1720 aaPredicted RBP17.33■□□□□ 0.37
ABCC1-205ENST00000574224 SPHKAPQ2M3C7 1700 aa17.33■□□□□ 0.37
ABCC1-205ENST00000574224 CCDC144AA2RUR9 1427 aa17.33■□□□□ 0.37
ABCC1-205ENST00000574224 CERKQ8TCT0 537 aa17.31■□□□□ 0.36
ABCC1-205ENST00000574224 NUTM2DQ5VT03 806 aaPredicted RBP17.31■□□□□ 0.36
ABCC1-205ENST00000574224 SENP3Q9H4L4 574 aaPredicted RBP17.31■□□□□ 0.36
ABCC1-205ENST00000574224 TMEM131LA2VDJ0 1609 aa17.3■□□□□ 0.36
ABCC1-205ENST00000574224 IQGAP1P46940 1657 aa17.3■□□□□ 0.36
ABCC1-205ENST00000574224 ZFYVE9O95405 1425 aa17.29■□□□□ 0.36
ABCC1-205ENST00000574224 CLTCL1P53675 1640 aa17.28■□□□□ 0.36
ABCC1-205ENST00000574224 CENPBP07199 599 aaPredicted RBP17.27■□□□□ 0.36
ABCC1-205ENST00000574224 SLC26A8Q96RN1 970 aa17.27■□□□□ 0.36
ABCC1-205ENST00000574224 PLEKHG1Q9ULL1 1385 aa17.27■□□□□ 0.36
ABCC1-205ENST00000574224 MIER1Q8N108 512 aa17.26■□□□□ 0.35
ABCC1-205ENST00000574224 RPGRIP1LQ68CZ1 1315 aa17.23■□□□□ 0.35
ABCC1-205ENST00000574224 RGL3Q3MIN7 710 aa17.23■□□□□ 0.35
ABCC1-205ENST00000574224 CPS1P31327 1500 aa17.22■□□□□ 0.35
ABCC1-205ENST00000574224 VGFO15240 615 aaPredicted RBP17.22■□□□□ 0.35
ABCC1-205ENST00000574224 LTBP4Q8N2S1 1624 aa17.22■□□□□ 0.35
ABCC1-205ENST00000574224 FBXO41Q8TF61 875 aa17.21■□□□□ 0.34
ABCC1-205ENST00000574224 L3MBTL2Q969R5 705 aa17.21■□□□□ 0.34
ABCC1-205ENST00000574224 TBX22Q9Y458 520 aa17.19■□□□□ 0.34
ABCC1-205ENST00000574224 MYO5BQ9ULV0 1848 aa17.18■□□□□ 0.34
ABCC1-205ENST00000574224 KCNA6P17658 529 aa17.18■□□□□ 0.34
ABCC1-205ENST00000574224 KIF1BO60333 1816 aa17.18■□□□□ 0.34
ABCC1-205ENST00000574224 IQSEC2Q5JU85 1478 aa17.17■□□□□ 0.34
ABCC1-205ENST00000574224 NEXMIFQ5QGS0 1516 aa17.17■□□□□ 0.34
ABCC1-205ENST00000574224 SPATA31E1Q6ZUB1 1445 aa17.15■□□□□ 0.34
ABCC1-205ENST00000574224 ILDR1Q86SU0 546 aaPredicted RBP17.15■□□□□ 0.34
ABCC1-205ENST00000574224 ADAMTS13Q76LX8 1427 aa17.15■□□□□ 0.34
ABCC1-205ENST00000574224 DIP2AQ14689 1571 aa17.14■□□□□ 0.33
ABCC1-205ENST00000574224 UBAP1LF5GYI3 381 aa17.14■□□□□ 0.33
ABCC1-205ENST00000574224 EIF4G2P78344 907 aaKnown RBP eCLIP17.14■□□□□ 0.331e-7■■■■■ 32.2
ABCC1-205ENST00000574224 PROSER2Q86WR7 435 aaPredicted RBP17.14■□□□□ 0.33
ABCC1-205ENST00000574224 PIK3R4Q99570 1358 aa17.13■□□□□ 0.33
ABCC1-205ENST00000574224 TOM1O60784 492 aa17.11■□□□□ 0.33
ABCC1-205ENST00000574224 C14orf37Q86TY3 774 aa17.11■□□□□ 0.33
ABCC1-205ENST00000574224 SCAF1Q9H7N4 1312 aaKnown RBP17.11■□□□□ 0.33
ABCC1-205ENST00000574224 LRRC7Q96NW7 1537 aa17.11■□□□□ 0.33
ABCC1-205ENST00000574224 SETBP1Q9Y6X0 1596 aa17.11■□□□□ 0.33
ABCC1-205ENST00000574224 NKTRP30414 1462 aaKnown RBP17.11■□□□□ 0.33
ABCC1-205ENST00000574224 TMEM94Q12767 1356 aa17.1■□□□□ 0.33
ABCC1-205ENST00000574224 AMOTL2Q9Y2J4 779 aa17.1■□□□□ 0.33
ABCC1-205ENST00000574224 ADGRF5Q8IZF2 1346 aa17.09■□□□□ 0.33
ABCC1-205ENST00000574224 RALGAPBQ86X10 1494 aa17.08■□□□□ 0.33
ABCC1-205ENST00000574224 DDX10Q13206 875 aaKnown RBP17.08■□□□□ 0.32
ABCC1-205ENST00000574224 HSPA5P11021 654 aaKnown RBP17.07■□□□□ 0.32
ABCC1-205ENST00000574224 METP08581 1390 aa17.07■□□□□ 0.32
ABCC1-205ENST00000574224 DCAF11Q8TEB1 546 aa17.06■□□□□ 0.32
ABCC1-205ENST00000574224 RBM33Q96EV2 1170 aaKnown RBP17.06■□□□□ 0.32
ABCC1-205ENST00000574224 KDM2AQ9Y2K7 1162 aa17.06■□□□□ 0.32
ABCC1-205ENST00000574224 NWD1Q149M9 1564 aa17.06■□□□□ 0.32
ABCC1-205ENST00000574224 PIP4K2BP78356 416 aa17.06■□□□□ 0.32
ABCC1-205ENST00000574224 NBPF8Q3BBV2 869 aa17.06■□□□□ 0.32
ABCC1-205ENST00000574224 MSH6P52701 1360 aa17.05■□□□□ 0.32
ABCC1-205ENST00000574224 MYOM2P54296 1465 aa17.04■□□□□ 0.32
ABCC1-205ENST00000574224 STAC3Q96MF2 364 aa17.04■□□□□ 0.32
ABCC1-205ENST00000574224 HIRIP3Q9BW71 556 aaPredicted RBP17.04■□□□□ 0.32
ABCC1-205ENST00000574224 PPLO60437 1756 aa17.04■□□□□ 0.32
ABCC1-205ENST00000574224 NRXN3Q9Y4C0 1643 aa17.04■□□□□ 0.32
ABCC1-205ENST00000574224 PIK3C2GO75747 1445 aa17.03■□□□□ 0.32
ABCC1-205ENST00000574224 PTPRUQ92729 1446 aa17.03■□□□□ 0.32
ABCC1-205ENST00000574224 STRCP1A6NGW2 1772 aa17.03■□□□□ 0.32
ABCC1-205ENST00000574224 ANP32CO43423 234 aa17.02■□□□□ 0.32
ABCC1-205ENST00000574224 LAMC1P11047 1609 aa17.02■□□□□ 0.31
ABCC1-205ENST00000574224 ALKQ9UM73 1620 aa17.02■□□□□ 0.31
ABCC1-205ENST00000574224 TRPM1Q7Z4N2 1603 aa17.01■□□□□ 0.31
ABCC1-205ENST00000574224 YTHDC1Q96MU7 727 aaKnown RBP17.01■□□□□ 0.31
ABCC1-205ENST00000574224 STK26Q9P289 416 aa17■□□□□ 0.31
ABCC1-205ENST00000574224 NCOA3Q9Y6Q9 1424 aa17■□□□□ 0.31
ABCC1-205ENST00000574224 CCER2I3L3R5 266 aa16.99■□□□□ 0.31
ABCC1-205ENST00000574224 ATF3P18847 181 aa16.99■□□□□ 0.31
ABCC1-205ENST00000574224 CFAP70Q5T0N1 1121 aa16.98■□□□□ 0.31
ABCC1-205ENST00000574224 WASHC2AQ641Q2 1341 aa16.98■□□□□ 0.31
ABCC1-205ENST00000574224 CHD2O14647 1828 aaKnown RBP16.97■□□□□ 0.31
ABCC1-205ENST00000574224 TMEM132EQ6IEE7 984 aa16.97■□□□□ 0.31
ABCC1-205ENST00000574224 C19orf44Q9H6X5 657 aa16.97■□□□□ 0.31
ABCC1-205ENST00000574224 C14orf93Q9H972 538 aaKnown RBP16.97■□□□□ 0.31
ABCC1-205ENST00000574224 USP47Q96K76 1375 aa16.97■□□□□ 0.31
ABCC1-205ENST00000574224 CCDC7Q96M83 1385 aa16.97■□□□□ 0.31
ABCC1-205ENST00000574224 NRXN1Q9ULB1 1477 aa16.97■□□□□ 0.31
ABCC1-205ENST00000574224 PTCH1Q13635 1447 aa16.97■□□□□ 0.31
ABCC1-205ENST00000574224 CADPS2Q86UW7 1296 aa16.96■□□□□ 0.31
ABCC1-205ENST00000574224 PRAG1Q86YV5 1406 aa16.96■□□□□ 0.31
ABCC1-205ENST00000574224 IFT172Q9UG01 1749 aa16.96■□□□□ 0.31
ABCC1-205ENST00000574224 LRPPRCP42704 1394 aaKnown RBP16.96■□□□□ 0.3
ABCC1-205ENST00000574224 XRN1Q8IZH2 1706 aaKnown RBP16.95■□□□□ 0.3
ABCC1-205ENST00000574224 ROBO2Q9HCK4 1378 aa16.94■□□□□ 0.3
ABCC1-205ENST00000574224 YTHDC2Q9H6S0 1430 aaKnown RBP16.93■□□□□ 0.3
ABCC1-205ENST00000574224 SLAIN2Q9P270 581 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms