RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 PPP1R15AO75807 674 aaPredicted RBP14.64□□□□□ -0.07
NPLOC4-212ENST00000573328 SENP3Q9H4L4 574 aaPredicted RBP14.64□□□□□ -0.07
NPLOC4-212ENST00000573328 RIMS2Q9UQ26 1411 aa14.63□□□□□ -0.07
NPLOC4-212ENST00000573328 SLC26A8Q96RN1 970 aa14.62□□□□□ -0.07
NPLOC4-212ENST00000573328 ALKQ9UM73 1620 aa14.62□□□□□ -0.07
NPLOC4-212ENST00000573328 ZFYVE9O95405 1425 aa14.61□□□□□ -0.07
NPLOC4-212ENST00000573328 CHD2O14647 1828 aaKnown RBP14.61□□□□□ -0.07
NPLOC4-212ENST00000573328 KIF1BO60333 1816 aa14.61□□□□□ -0.07
NPLOC4-212ENST00000573328 NWD1Q149M9 1564 aa14.6□□□□□ -0.07
NPLOC4-212ENST00000573328 HDGFP51858 240 aaKnown RBP14.6□□□□□ -0.07
NPLOC4-212ENST00000573328 NAIPQ13075 1403 aa14.59□□□□□ -0.07
NPLOC4-212ENST00000573328 PLEKHG1Q9ULL1 1385 aa14.59□□□□□ -0.07
NPLOC4-212ENST00000573328 NKTRP30414 1462 aaKnown RBP14.58□□□□□ -0.08
NPLOC4-212ENST00000573328 HSPA1LP34931 641 aa14.58□□□□□ -0.08
NPLOC4-212ENST00000573328 DIP2AQ14689 1571 aa14.57□□□□□ -0.08
NPLOC4-212ENST00000573328 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.57□□□□□ -0.08
NPLOC4-212ENST00000573328 CLTCL1P53675 1640 aa14.56□□□□□ -0.08
NPLOC4-212ENST00000573328 KCNA6P17658 529 aa14.56□□□□□ -0.08
NPLOC4-212ENST00000573328 NUTM2DQ5VT03 806 aaPredicted RBP14.56□□□□□ -0.08
NPLOC4-212ENST00000573328 TMEM94Q12767 1356 aa14.56□□□□□ -0.08
NPLOC4-212ENST00000573328 PROSER2Q86WR7 435 aaPredicted RBP14.55□□□□□ -0.08
NPLOC4-212ENST00000573328 TRIM52Q96A61 297 aa14.55□□□□□ -0.08
NPLOC4-212ENST00000573328 HFM1A2PYH4 1435 aa14.55□□□□□ -0.08
NPLOC4-212ENST00000573328 TRPM2O94759 1503 aa14.55□□□□□ -0.08
NPLOC4-212ENST00000573328 MED1Q15648 1581 aaPredicted RBP14.54□□□□□ -0.08
NPLOC4-212ENST00000573328 ZNF326Q5BKZ1 582 aaKnown RBP14.53□□□□□ -0.08
NPLOC4-212ENST00000573328 ROBO1Q9Y6N7 1651 aa14.52□□□□□ -0.08
NPLOC4-212ENST00000573328 RBM33Q96EV2 1170 aaKnown RBP14.52□□□□□ -0.09
NPLOC4-212ENST00000573328 MSH6P52701 1360 aa14.5□□□□□ -0.09
NPLOC4-212ENST00000573328 NRXN3Q9Y4C0 1643 aa14.5□□□□□ -0.09
NPLOC4-212ENST00000573328 ADAMTS13Q76LX8 1427 aa14.49□□□□□ -0.09
NPLOC4-212ENST00000573328 NEXMIFQ5QGS0 1516 aa14.48□□□□□ -0.09
NPLOC4-212ENST00000573328 ILDR2Q71H61 639 aa14.48□□□□□ -0.09
NPLOC4-212ENST00000573328 C14orf37Q86TY3 774 aa14.48□□□□□ -0.09
NPLOC4-212ENST00000573328 TBX22Q9Y458 520 aa14.48□□□□□ -0.09
NPLOC4-212ENST00000573328 SETBP1Q9Y6X0 1596 aa14.47□□□□□ -0.09
NPLOC4-212ENST00000573328 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.47□□□□□ -0.09
NPLOC4-212ENST00000573328 SLC4A1APQ9BWU0 796 aaKnown RBP14.47□□□□□ -0.09
NPLOC4-212ENST00000573328 PHLPP1O60346 1717 aa14.46□□□□□ -0.09
NPLOC4-212ENST00000573328 PPLO60437 1756 aa14.46□□□□□ -0.09
NPLOC4-212ENST00000573328 XRN1Q8IZH2 1706 aaKnown RBP14.46□□□□□ -0.1
NPLOC4-212ENST00000573328 PIK3R4Q99570 1358 aa14.46□□□□□ -0.1
NPLOC4-212ENST00000573328 FAM135BQ49AJ0 1406 aa14.44□□□□□ -0.1
NPLOC4-212ENST00000573328 PHF23Q9BUL5 403 aaPredicted RBP14.44□□□□□ -0.1
NPLOC4-212ENST00000573328 AMOTL2Q9Y2J4 779 aa14.42□□□□□ -0.1
NPLOC4-212ENST00000573328 PTPRUQ92729 1446 aa14.41□□□□□ -0.1
NPLOC4-212ENST00000573328 NCOA3Q9Y6Q9 1424 aa14.41□□□□□ -0.1
NPLOC4-212ENST00000573328 SETD1AO15047 1707 aaKnown RBP14.41□□□□□ -0.1
NPLOC4-212ENST00000573328 NALCNQ8IZF0 1738 aa14.39□□□□□ -0.11
NPLOC4-212ENST00000573328 ATF3P18847 181 aa14.39□□□□□ -0.11
NPLOC4-212ENST00000573328 FOXD1Q16676 465 aa14.39□□□□□ -0.11
NPLOC4-212ENST00000573328 SLAIN2Q9P270 581 aa14.39□□□□□ -0.11
NPLOC4-212ENST00000573328 CCDC144AA2RUR9 1427 aa14.39□□□□□ -0.11
NPLOC4-212ENST00000573328 IFT172Q9UG01 1749 aa14.38□□□□□ -0.11
NPLOC4-212ENST00000573328 SOCS7O14512 581 aa14.38□□□□□ -0.11
NPLOC4-212ENST00000573328 METP08581 1390 aa14.37□□□□□ -0.11
NPLOC4-212ENST00000573328 CADPS2Q86UW7 1296 aa14.37□□□□□ -0.11
NPLOC4-212ENST00000573328 COL16A1Q07092 1604 aaPredicted RBP14.37□□□□□ -0.11
NPLOC4-212ENST00000573328 SETD5Q9C0A6 1442 aa14.36□□□□□ -0.11
NPLOC4-212ENST00000573328 VGFO15240 615 aaPredicted RBP14.36□□□□□ -0.11
NPLOC4-212ENST00000573328 C19orf44Q9H6X5 657 aa14.36□□□□□ -0.11
NPLOC4-212ENST00000573328 MPHOSPH9Q99550 1183 aa14.35□□□□□ -0.11
NPLOC4-212ENST00000573328 RPGRIP1LQ68CZ1 1315 aa14.35□□□□□ -0.11
NPLOC4-212ENST00000573328 DCCP43146 1447 aa14.34□□□□□ -0.11
NPLOC4-212ENST00000573328 AHDC1Q5TGY3 1603 aaPredicted RBP14.33□□□□□ -0.11
NPLOC4-212ENST00000573328 ADGRL3Q9HAR2 1447 aa14.32□□□□□ -0.12
NPLOC4-212ENST00000573328 RGL3Q3MIN7 710 aa14.32□□□□□ -0.12
NPLOC4-212ENST00000573328 ACIN1Q9UKV3 1341 aaKnown RBP14.32□□□□□ -0.12
NPLOC4-212ENST00000573328 SHPRHQ149N8 1683 aa14.32□□□□□ -0.12
NPLOC4-212ENST00000573328 NHSL1Q5SYE7 1610 aa14.31□□□□□ -0.12
NPLOC4-212ENST00000573328 RAB3GAP2Q9H2M9 1393 aa14.31□□□□□ -0.12
NPLOC4-212ENST00000573328 JCADQ9P266 1359 aa14.31□□□□□ -0.12
NPLOC4-212ENST00000573328 PTCH1Q13635 1447 aa14.31□□□□□ -0.12
NPLOC4-212ENST00000573328 ASXL1Q8IXJ9 1541 aa14.31□□□□□ -0.12
NPLOC4-212ENST00000573328 MST1RQ04912 1400 aa14.29□□□□□ -0.12
NPLOC4-212ENST00000573328 SPATA31E1Q6ZUB1 1445 aa14.29□□□□□ -0.12
NPLOC4-212ENST00000573328 KNDC1Q76NI1 1749 aa14.28□□□□□ -0.12
NPLOC4-212ENST00000573328 ANKRD30BQ9BXX2 1392 aa14.27□□□□□ -0.12
NPLOC4-212ENST00000573328 BRINP3Q76B58 766 aa14.27□□□□□ -0.13
NPLOC4-212ENST00000573328 LAMC1P11047 1609 aa14.26□□□□□ -0.13
NPLOC4-212ENST00000573328 ROBO2Q9HCK4 1378 aa14.26□□□□□ -0.13
NPLOC4-212ENST00000573328 ADGRF5Q8IZF2 1346 aa14.26□□□□□ -0.13
NPLOC4-212ENST00000573328 PRAG1Q86YV5 1406 aa14.24□□□□□ -0.13
NPLOC4-212ENST00000573328 MEX3CQ5U5Q3 659 aaKnown RBP14.24□□□□□ -0.13
NPLOC4-212ENST00000573328 PIK3C2GO75747 1445 aa14.24□□□□□ -0.13
NPLOC4-212ENST00000573328 C1orf167Q5SNV9 1468 aa14.23□□□□□ -0.13
NPLOC4-212ENST00000573328 LRP6O75581 1613 aa14.23□□□□□ -0.13
NPLOC4-212ENST00000573328 CDC42BPGQ6DT37 1551 aa14.22□□□□□ -0.13
NPLOC4-212ENST00000573328 SPATA31A6Q5VVP1 1343 aa14.22□□□□□ -0.13
NPLOC4-212ENST00000573328 STK26Q9P289 416 aa14.22□□□□□ -0.13
NPLOC4-212ENST00000573328 RGS17Q9UGC6 210 aaPredicted RBP14.22□□□□□ -0.13
NPLOC4-212ENST00000573328 MYOM2P54296 1465 aa14.21□□□□□ -0.13
NPLOC4-212ENST00000573328 NUTM2BA6NNL0 878 aaPredicted RBP14.19□□□□□ -0.14
NPLOC4-212ENST00000573328 NUTM2EB1AL46 878 aaPredicted RBP14.19□□□□□ -0.14
NPLOC4-212ENST00000573328 TMEM132EQ6IEE7 984 aa14.19□□□□□ -0.14
NPLOC4-212ENST00000573328 NUTM2AQ8IVF1 878 aaPredicted RBP14.19□□□□□ -0.14
NPLOC4-212ENST00000573328 DDX17Q92841 729 aaKnown RBP14.19□□□□□ -0.14
NPLOC4-212ENST00000573328 LRPPRCP42704 1394 aaKnown RBP14.19□□□□□ -0.14
NPLOC4-212ENST00000573328 FMN2Q9NZ56 1722 aa14.18□□□□□ -0.14
NPLOC4-212ENST00000573328 TECPR2O15040 1411 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms