RNA–Protein interactions for RNA: ENST00000573325.1

ABR-220, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-220ENST00000573325 NKTRP30414 1462 aaKnown RBP17.12■□□□□ 0.33
ABR-220ENST00000573325 RBM33Q96EV2 1170 aaKnown RBP17.12■□□□□ 0.33
ABR-220ENST00000573325 ADAMTS13Q76LX8 1427 aa17.12■□□□□ 0.33
ABR-220ENST00000573325 FAM50AQ14320 339 aaKnown RBP17.11■□□□□ 0.33
ABR-220ENST00000573325 RIMS2Q9UQ26 1411 aa17.09■□□□□ 0.33
ABR-220ENST00000573325 MYO5BQ9ULV0 1848 aa17.08■□□□□ 0.33
ABR-220ENST00000573325 E9PCH4 1651 aa17.08■□□□□ 0.32
ABR-220ENST00000573325 STAG3Q9UJ98 1225 aa17.07■□□□□ 0.32
ABR-220ENST00000573325 TBX22Q9Y458 520 aa17.07■□□□□ 0.32
ABR-220ENST00000573325 PROSER2Q86WR7 435 aaPredicted RBP17.06■□□□□ 0.32
ABR-220ENST00000573325 GCC2Q8IWJ2 1684 aa17.06■□□□□ 0.32
ABR-220ENST00000573325 IQGAP3Q86VI3 1631 aa17.06■□□□□ 0.32
ABR-220ENST00000573325 CHD2O14647 1828 aaKnown RBP17.05■□□□□ 0.32
ABR-220ENST00000573325 ROBO1Q9Y6N7 1651 aa17.04■□□□□ 0.32
ABR-220ENST00000573325 SENP3Q9H4L4 574 aaPredicted RBP17.04■□□□□ 0.32
ABR-220ENST00000573325 PTPRUQ92729 1446 aa17.04■□□□□ 0.32
ABR-220ENST00000573325 NCOA3Q9Y6Q9 1424 aa17.03■□□□□ 0.32
ABR-220ENST00000573325 POTEAQ6S8J7 498 aa17.01■□□□□ 0.31
ABR-220ENST00000573325 SLAIN2Q9P270 581 aa17.01■□□□□ 0.31
ABR-220ENST00000573325 PIK3R4Q99570 1358 aa17■□□□□ 0.31
ABR-220ENST00000573325 NRXN3Q9Y4C0 1643 aa16.99■□□□□ 0.31
ABR-220ENST00000573325 NUP155O75694 1391 aa16.98■□□□□ 0.31
ABR-220ENST00000573325 NUTM2DQ5VT03 806 aaPredicted RBP16.97■□□□□ 0.31
ABR-220ENST00000573325 MSH6P52701 1360 aa16.97■□□□□ 0.31
ABR-220ENST00000573325 DIP2AQ14689 1571 aa16.97■□□□□ 0.31
ABR-220ENST00000573325 COL16A1Q07092 1604 aaPredicted RBP16.96■□□□□ 0.31
ABR-220ENST00000573325 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.96■□□□□ 0.31
ABR-220ENST00000573325 PHF23Q9BUL5 403 aaPredicted RBP16.96■□□□□ 0.31
ABR-220ENST00000573325 RRBP1Q9P2E9 1410 aaKnown RBP16.94■□□□□ 0.3
ABR-220ENST00000573325 SETBP1Q9Y6X0 1596 aa16.94■□□□□ 0.3
ABR-220ENST00000573325 XRN1Q8IZH2 1706 aaKnown RBP16.93■□□□□ 0.3
ABR-220ENST00000573325 LRP6O75581 1613 aa16.92■□□□□ 0.3
ABR-220ENST00000573325 METP08581 1390 aa16.92■□□□□ 0.3
ABR-220ENST00000573325 HDGFP51858 240 aaKnown RBP16.92■□□□□ 0.3
ABR-220ENST00000573325 C19orf44Q9H6X5 657 aa16.92■□□□□ 0.3
ABR-220ENST00000573325 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.92■□□□□ 0.3
ABR-220ENST00000573325 NAIPQ13075 1403 aa16.91■□□□□ 0.3
ABR-220ENST00000573325 PPARGC1BQ86YN6 1023 aaKnown RBP16.91■□□□□ 0.3
ABR-220ENST00000573325 AHDC1Q5TGY3 1603 aaPredicted RBP16.91■□□□□ 0.3
ABR-220ENST00000573325 JCADQ9P266 1359 aa16.9■□□□□ 0.3
ABR-220ENST00000573325 PPP1R15AO75807 674 aaPredicted RBP16.9■□□□□ 0.3
ABR-220ENST00000573325 AMOTL2Q9Y2J4 779 aa16.9■□□□□ 0.3
ABR-220ENST00000573325 TRPM2O94759 1503 aa16.89■□□□□ 0.29
ABR-220ENST00000573325 PHLPP1O60346 1717 aa16.88■□□□□ 0.29
ABR-220ENST00000573325 NEXMIFQ5QGS0 1516 aa16.88■□□□□ 0.29
ABR-220ENST00000573325 CHGAP10645 457 aaKnown RBP16.88■□□□□ 0.29
ABR-220ENST00000573325 BRINP3Q76B58 766 aa16.88■□□□□ 0.29
ABR-220ENST00000573325 BCANQ96GW7 911 aa16.88■□□□□ 0.29
ABR-220ENST00000573325 DCCP43146 1447 aa16.87■□□□□ 0.29
ABR-220ENST00000573325 CLTCL1P53675 1640 aa16.87■□□□□ 0.29
ABR-220ENST00000573325 ITGAEP38570 1179 aa16.86■□□□□ 0.29
ABR-220ENST00000573325 CADPS2Q86UW7 1296 aa16.86■□□□□ 0.29
ABR-220ENST00000573325 SPHKAPQ2M3C7 1700 aa16.86■□□□□ 0.29
ABR-220ENST00000573325 MST1RQ04912 1400 aa16.86■□□□□ 0.29
ABR-220ENST00000573325 PRAG1Q86YV5 1406 aa16.84■□□□□ 0.29
ABR-220ENST00000573325 SETD5Q9C0A6 1442 aa16.82■□□□□ 0.28
ABR-220ENST00000573325 SPATA31A6Q5VVP1 1343 aa16.82■□□□□ 0.28
ABR-220ENST00000573325 ASXL1Q8IXJ9 1541 aa16.81■□□□□ 0.28
ABR-220ENST00000573325 SETD1AO15047 1707 aaKnown RBP16.81■□□□□ 0.28
ABR-220ENST00000573325 SHPRHQ149N8 1683 aa16.81■□□□□ 0.28
ABR-220ENST00000573325 HFM1A2PYH4 1435 aa16.8■□□□□ 0.28
ABR-220ENST00000573325 ADGRL3Q9HAR2 1447 aa16.79■□□□□ 0.28
ABR-220ENST00000573325 ATF3P18847 181 aa16.79■□□□□ 0.28
ABR-220ENST00000573325 ROBO2Q9HCK4 1378 aa16.77■□□□□ 0.28
ABR-220ENST00000573325 NHSL1Q5SYE7 1610 aa16.77■□□□□ 0.27
ABR-220ENST00000573325 LAMC1P11047 1609 aa16.76■□□□□ 0.27
ABR-220ENST00000573325 DDX17Q92841 729 aaKnown RBP16.75■□□□□ 0.27
ABR-220ENST00000573325 PTCH1Q13635 1447 aa16.75■□□□□ 0.27
ABR-220ENST00000573325 NALCNQ8IZF0 1738 aa16.75■□□□□ 0.27
ABR-220ENST00000573325 C14orf37Q86TY3 774 aa16.74■□□□□ 0.27
ABR-220ENST00000573325 SRCAPQ6ZRS2 3230 aa16.74■□□□□ 0.27
ABR-220ENST00000573325 C1orf167Q5SNV9 1468 aa16.73■□□□□ 0.27
ABR-220ENST00000573325 PNPLA6Q8IY17 1366 aa16.73■□□□□ 0.27
ABR-220ENST00000573325 ZNF326Q5BKZ1 582 aaKnown RBP16.72■□□□□ 0.27
ABR-220ENST00000573325 SPATA31E1Q6ZUB1 1445 aa16.7■□□□□ 0.26
ABR-220ENST00000573325 SOS2Q07890 1332 aaPredicted RBP16.7■□□□□ 0.26
ABR-220ENST00000573325 RPGRIP1LQ68CZ1 1315 aa16.7■□□□□ 0.26
ABR-220ENST00000573325 ZNF772Q68DY9 489 aaPredicted RBP16.68■□□□□ 0.26
ABR-220ENST00000573325 UPF1Q92900 1129 aaKnown RBP eCLIP16.68■□□□□ 0.26
ABR-220ENST00000573325 CDK12Q9NYV4 1490 aaPredicted RBP16.67■□□□□ 0.26
ABR-220ENST00000573325 VGFO15240 615 aaPredicted RBP16.67■□□□□ 0.26
ABR-220ENST00000573325 ORAI2Q96SN7 254 aa16.67■□□□□ 0.26
ABR-220ENST00000573325 KIF1BO60333 1816 aa16.67■□□□□ 0.26
ABR-220ENST00000573325 ADGRF5Q8IZF2 1346 aa16.67■□□□□ 0.26
ABR-220ENST00000573325 PPLO60437 1756 aa16.66■□□□□ 0.26
ABR-220ENST00000573325 FOXD1Q16676 465 aa16.66■□□□□ 0.26
ABR-220ENST00000573325 LRRC59Q96AG4 307 aaKnown RBP16.66■□□□□ 0.26
ABR-220ENST00000573325 TECPR2O15040 1411 aa16.65■□□□□ 0.26
ABR-220ENST00000573325 SLC4A1APQ9BWU0 796 aaKnown RBP16.65■□□□□ 0.26
ABR-220ENST00000573325 AFF2P51816 1311 aa16.65■□□□□ 0.26
ABR-220ENST00000573325 EP400Q96L91 3159 aa16.63■□□□□ 0.25
ABR-220ENST00000573325 NUTM2BA6NNL0 878 aaPredicted RBP16.62■□□□□ 0.25
ABR-220ENST00000573325 NUTM2EB1AL46 878 aaPredicted RBP16.62■□□□□ 0.25
ABR-220ENST00000573325 NUTM2AQ8IVF1 878 aaPredicted RBP16.62■□□□□ 0.25
ABR-220ENST00000573325 RXRBP28702 533 aa16.61■□□□□ 0.25
ABR-220ENST00000573325 TRIM52Q96A61 297 aa16.61■□□□□ 0.25
ABR-220ENST00000573325 RGS12O14924 1447 aa16.61■□□□□ 0.25
ABR-220ENST00000573325 MYOM2P54296 1465 aa16.61■□□□□ 0.25
ABR-220ENST00000573325 PXDNQ92626 1479 aa16.61■□□□□ 0.25
ABR-220ENST00000573325 MEX3CQ5U5Q3 659 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms