RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 LRRC7Q96NW7 1537 aa24.2■■□□□ 1.47
NDE1-205ENST00000572756 SLC4A1APQ9BWU0 796 aaKnown RBP24.2■■□□□ 1.46
NDE1-205ENST00000572756 HDGFP51858 240 aaKnown RBP24.18■■□□□ 1.46
NDE1-205ENST00000572756 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.18■■□□□ 1.46
NDE1-205ENST00000572756 SETD5Q9C0A6 1442 aa24.18■■□□□ 1.46
NDE1-205ENST00000572756 KIF1BO60333 1816 aa24.17■■□□□ 1.46
NDE1-205ENST00000572756 SLC26A8Q96RN1 970 aa24.17■■□□□ 1.46
NDE1-205ENST00000572756 XIRP1Q702N8 1843 aaKnown RBP24.16■■□□□ 1.46
NDE1-205ENST00000572756 NWD1Q149M9 1564 aa24.15■■□□□ 1.46
NDE1-205ENST00000572756 UBAP1LF5GYI3 381 aa24.14■■□□□ 1.45
NDE1-205ENST00000572756 PPP1R15AO75807 674 aaPredicted RBP24.14■■□□□ 1.45
NDE1-205ENST00000572756 ALKQ9UM73 1620 aa24.13■■□□□ 1.45
NDE1-205ENST00000572756 ADAMTS13Q76LX8 1427 aa24.12■■□□□ 1.45
NDE1-205ENST00000572756 CHD2O14647 1828 aaKnown RBP24.12■■□□□ 1.45
NDE1-205ENST00000572756 ACIN1Q9UKV3 1341 aaKnown RBP24.11■■□□□ 1.45
NDE1-205ENST00000572756 KCNA6P17658 529 aa24.11■■□□□ 1.45
NDE1-205ENST00000572756 NUTM2DQ5VT03 806 aaPredicted RBP24.11■■□□□ 1.45
NDE1-205ENST00000572756 DIP2AQ14689 1571 aa24.11■■□□□ 1.45
NDE1-205ENST00000572756 NEXMIFQ5QGS0 1516 aa24.1■■□□□ 1.45
NDE1-205ENST00000572756 MPHOSPH9Q99550 1183 aa24.1■■□□□ 1.45
NDE1-205ENST00000572756 RAB3GAP2Q9H2M9 1393 aa24.09■■□□□ 1.45
NDE1-205ENST00000572756 BCANQ96GW7 911 aa24.09■■□□□ 1.45
NDE1-205ENST00000572756 TBX22Q9Y458 520 aa24.09■■□□□ 1.45
NDE1-205ENST00000572756 NRXN3Q9Y4C0 1643 aa24.09■■□□□ 1.45
NDE1-205ENST00000572756 NKTRP30414 1462 aaKnown RBP24.08■■□□□ 1.45
NDE1-205ENST00000572756 FOXD1Q16676 465 aa24.08■■□□□ 1.45
NDE1-205ENST00000572756 SENP3Q9H4L4 574 aaPredicted RBP24.08■■□□□ 1.45
NDE1-205ENST00000572756 SETBP1Q9Y6X0 1596 aa24.07■■□□□ 1.44
NDE1-205ENST00000572756 TOM1O60784 492 aa24.06■■□□□ 1.44
NDE1-205ENST00000572756 ZNF326Q5BKZ1 582 aaKnown RBP24.06■■□□□ 1.44
NDE1-205ENST00000572756 PIK3R4Q99570 1358 aa24.03■■□□□ 1.44
NDE1-205ENST00000572756 TMEM94Q12767 1356 aa24.02■■□□□ 1.44
NDE1-205ENST00000572756 PPLO60437 1756 aa24.01■■□□□ 1.43
NDE1-205ENST00000572756 CCDC144AA2RUR9 1427 aa24■■□□□ 1.43
NDE1-205ENST00000572756 PROSER2Q86WR7 435 aaPredicted RBP23.98■■□□□ 1.43
NDE1-205ENST00000572756 HRCP23327 699 aa23.97■■□□□ 1.43
NDE1-205ENST00000572756 PIP4K2BP78356 416 aa23.97■■□□□ 1.43
NDE1-205ENST00000572756 RPGRIP1LQ68CZ1 1315 aa23.97■■□□□ 1.43
NDE1-205ENST00000572756 SPATA31E1Q6ZUB1 1445 aa23.97■■□□□ 1.43
NDE1-205ENST00000572756 PTPRUQ92729 1446 aa23.97■■□□□ 1.43
NDE1-205ENST00000572756 XRN1Q8IZH2 1706 aaKnown RBP23.96■■□□□ 1.43
NDE1-205ENST00000572756 SETD1AO15047 1707 aaKnown RBP23.95■■□□□ 1.42
NDE1-205ENST00000572756 RBM33Q96EV2 1170 aaKnown RBP23.94■■□□□ 1.42
NDE1-205ENST00000572756 IFT172Q9UG01 1749 aa23.93■■□□□ 1.42
NDE1-205ENST00000572756 SCAF1Q9H7N4 1312 aaKnown RBP23.93■■□□□ 1.42
NDE1-205ENST00000572756 METP08581 1390 aa23.92■■□□□ 1.42
NDE1-205ENST00000572756 VGFO15240 615 aaPredicted RBP23.92■■□□□ 1.42
NDE1-205ENST00000572756 NCOA3Q9Y6Q9 1424 aa23.92■■□□□ 1.42
NDE1-205ENST00000572756 AMOTL2Q9Y2J4 779 aa23.9■■□□□ 1.42
NDE1-205ENST00000572756 HSPA1LP34931 641 aa23.88■■□□□ 1.41
NDE1-205ENST00000572756 MSH6P52701 1360 aa23.87■■□□□ 1.41
NDE1-205ENST00000572756 ANKRD30BQ9BXX2 1392 aa23.87■■□□□ 1.41
NDE1-205ENST00000572756 RGL3Q3MIN7 710 aa23.85■■□□□ 1.41
NDE1-205ENST00000572756 FAM135BQ49AJ0 1406 aa23.84■■□□□ 1.41
NDE1-205ENST00000572756 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.84■■□□□ 1.41
NDE1-205ENST00000572756 ADGRF5Q8IZF2 1346 aa23.83■■□□□ 1.4
NDE1-205ENST00000572756 ROBO1Q9Y6N7 1651 aa23.81■■□□□ 1.4
NDE1-205ENST00000572756 PRAG1Q86YV5 1406 aa23.81■■□□□ 1.4
NDE1-205ENST00000572756 PIK3C2GO75747 1445 aa23.78■■□□□ 1.4
NDE1-205ENST00000572756 C19orf44Q9H6X5 657 aa23.78■■□□□ 1.4
NDE1-205ENST00000572756 PTCH1Q13635 1447 aa23.77■■□□□ 1.4
NDE1-205ENST00000572756 MYOM2P54296 1465 aa23.76■■□□□ 1.39
NDE1-205ENST00000572756 NRXN1Q9ULB1 1477 aa23.76■■□□□ 1.39
NDE1-205ENST00000572756 SLAIN2Q9P270 581 aa23.76■■□□□ 1.39
NDE1-205ENST00000572756 DCCP43146 1447 aa23.76■■□□□ 1.39
NDE1-205ENST00000572756 C14orf37Q86TY3 774 aa23.75■■□□□ 1.39
NDE1-205ENST00000572756 NALCNQ8IZF0 1738 aa23.75■■□□□ 1.39
NDE1-205ENST00000572756 ASXL1Q8IXJ9 1541 aa23.74■■□□□ 1.39
NDE1-205ENST00000572756 CADPS2Q86UW7 1296 aa23.73■■□□□ 1.39
NDE1-205ENST00000572756 ROBO2Q9HCK4 1378 aa23.73■■□□□ 1.39
NDE1-205ENST00000572756 ADGRL3Q9HAR2 1447 aa23.73■■□□□ 1.39
NDE1-205ENST00000572756 ATF3P18847 181 aa23.7■■□□□ 1.38
NDE1-205ENST00000572756 KNDC1Q76NI1 1749 aa23.69■■□□□ 1.38
NDE1-205ENST00000572756 LAMC1P11047 1609 aa23.69■■□□□ 1.38
NDE1-205ENST00000572756 TECPR2O15040 1411 aa23.68■■□□□ 1.38
NDE1-205ENST00000572756 DISP3Q9P2K9 1392 aa23.68■■□□□ 1.38
NDE1-205ENST00000572756 MED1Q15648 1581 aaPredicted RBP23.67■■□□□ 1.38
NDE1-205ENST00000572756 MST1RQ04912 1400 aa23.67■■□□□ 1.38
NDE1-205ENST00000572756 LRPPRCP42704 1394 aaKnown RBP23.66■■□□□ 1.38
NDE1-205ENST00000572756 C14orf93Q9H972 538 aaKnown RBP23.66■■□□□ 1.38
NDE1-205ENST00000572756 PHLPP1O60346 1717 aa23.66■■□□□ 1.38
NDE1-205ENST00000572756 ABCC11Q96J66 1382 aa23.64■■□□□ 1.37
NDE1-205ENST00000572756 AHDC1Q5TGY3 1603 aaPredicted RBP23.63■■□□□ 1.37
NDE1-205ENST00000572756 TMEM132EQ6IEE7 984 aa23.63■■□□□ 1.37
NDE1-205ENST00000572756 DHX57Q6P158 1386 aaKnown RBP23.63■■□□□ 1.37
NDE1-205ENST00000572756 YTHDC2Q9H6S0 1430 aaKnown RBP23.62■■□□□ 1.37
NDE1-205ENST00000572756 COL16A1Q07092 1604 aaPredicted RBP23.62■■□□□ 1.37
NDE1-205ENST00000572756 CFAP70Q5T0N1 1121 aa23.61■■□□□ 1.37
NDE1-205ENST00000572756 BRINP3Q76B58 766 aa23.6■■□□□ 1.37
NDE1-205ENST00000572756 DCAF11Q8TEB1 546 aa23.59■■□□□ 1.37
NDE1-205ENST00000572756 STAC3Q96MF2 364 aa23.59■■□□□ 1.37
NDE1-205ENST00000572756 STK26Q9P289 416 aa23.59■■□□□ 1.37
NDE1-205ENST00000572756 ADGRB1O14514 1584 aa23.58■■□□□ 1.37
NDE1-205ENST00000572756 CDC42BPGQ6DT37 1551 aa23.57■■□□□ 1.36
NDE1-205ENST00000572756 NHSL1Q5SYE7 1610 aa23.57■■□□□ 1.36
NDE1-205ENST00000572756 C1orf167Q5SNV9 1468 aa23.56■■□□□ 1.36
NDE1-205ENST00000572756 PLEKHH1Q9ULM0 1364 aa23.55■■□□□ 1.36
NDE1-205ENST00000572756 WAPLQ7Z5K2 1190 aa23.55■■□□□ 1.36
NDE1-205ENST00000572756 SIRT1Q96EB6 747 aa23.55■■□□□ 1.36
NDE1-205ENST00000572756 KDM2AQ9Y2K7 1162 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms