RNA–Protein interactions for RNA: ENST00000572383.1

PFN1-202, Transcript of profilin 1, humanhuman

TSL 3

Gene PFN1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-202ENST00000572383 ADGRB3O60242 1522 aa26.88■■□□□ 1.89
PFN1-202ENST00000572383 FOXD1Q16676 465 aa26.87■■□□□ 1.89
PFN1-202ENST00000572383 ALKQ9UM73 1620 aa26.87■■□□□ 1.89
PFN1-202ENST00000572383 LTKP29376 864 aa26.86■■□□□ 1.89
PFN1-202ENST00000572383 TRPM2O94759 1503 aa26.83■■□□□ 1.89
PFN1-202ENST00000572383 LRRC7Q96NW7 1537 aa26.8■■□□□ 1.88
PFN1-202ENST00000572383 TMEM131LA2VDJ0 1609 aa26.79■■□□□ 1.88
PFN1-202ENST00000572383 CHGAP10645 457 aaKnown RBP26.79■■□□□ 1.88
PFN1-202ENST00000572383 CLTCL1P53675 1640 aa26.79■■□□□ 1.88
PFN1-202ENST00000572383 ZFYVE9O95405 1425 aa26.71■■□□□ 1.87
PFN1-202ENST00000572383 DISP3Q9P2K9 1392 aa26.71■■□□□ 1.87
PFN1-202ENST00000572383 TOM1O60784 492 aa26.69■■□□□ 1.86
PFN1-202ENST00000572383 HDGFP51858 240 aaKnown RBP26.69■■□□□ 1.86
PFN1-202ENST00000572383 CHD2O14647 1828 aaKnown RBP26.69■■□□□ 1.86
PFN1-202ENST00000572383 PIP4K2BP78356 416 aa26.68■■□□□ 1.86
PFN1-202ENST00000572383 CCDC144AA2RUR9 1427 aa26.67■■□□□ 1.86
PFN1-202ENST00000572383 RIMS2Q9UQ26 1411 aa26.67■■□□□ 1.86
PFN1-202ENST00000572383 KIF1BO60333 1816 aa26.67■■□□□ 1.86
PFN1-202ENST00000572383 SCAF1Q9H7N4 1312 aaKnown RBP26.65■■□□□ 1.86
PFN1-202ENST00000572383 NWD1Q149M9 1564 aa26.65■■□□□ 1.86
PFN1-202ENST00000572383 PLEKHG1Q9ULL1 1385 aa26.64■■□□□ 1.86
PFN1-202ENST00000572383 ZNF326Q5BKZ1 582 aaKnown RBP26.64■■□□□ 1.86
PFN1-202ENST00000572383 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.63■■□□□ 1.85
PFN1-202ENST00000572383 ANKRD30BQ9BXX2 1392 aa26.62■■□□□ 1.85
PFN1-202ENST00000572383 HSPA1LP34931 641 aa26.62■■□□□ 1.85
PFN1-202ENST00000572383 NUTM2DQ5VT03 806 aaPredicted RBP26.62■■□□□ 1.85
PFN1-202ENST00000572383 SLC26A8Q96RN1 970 aa26.62■■□□□ 1.85
PFN1-202ENST00000572383 PPP1R15AO75807 674 aaPredicted RBP26.61■■□□□ 1.85
PFN1-202ENST00000572383 KCNA6P17658 529 aa26.6■■□□□ 1.85
PFN1-202ENST00000572383 ILDR2Q71H61 639 aa26.6■■□□□ 1.85
PFN1-202ENST00000572383 BCANQ96GW7 911 aa26.6■■□□□ 1.85
PFN1-202ENST00000572383 PCGF6Q9BYE7 350 aa26.6■■□□□ 1.85
PFN1-202ENST00000572383 SENP3Q9H4L4 574 aaPredicted RBP26.58■■□□□ 1.85
PFN1-202ENST00000572383 NEXMIFQ5QGS0 1516 aa26.56■■□□□ 1.84
PFN1-202ENST00000572383 MED1Q15648 1581 aaPredicted RBP26.56■■□□□ 1.84
PFN1-202ENST00000572383 SPATA31E1Q6ZUB1 1445 aa26.56■■□□□ 1.84
PFN1-202ENST00000572383 NKTRP30414 1462 aaKnown RBP26.55■■□□□ 1.84
PFN1-202ENST00000572383 RGL3Q3MIN7 710 aa26.53■■□□□ 1.84
PFN1-202ENST00000572383 DIP2AQ14689 1571 aa26.53■■□□□ 1.84
PFN1-202ENST00000572383 TBX22Q9Y458 520 aa26.52■■□□□ 1.84
PFN1-202ENST00000572383 TMEM94Q12767 1356 aa26.51■■□□□ 1.83
PFN1-202ENST00000572383 DHX57Q6P158 1386 aaKnown RBP26.5■■□□□ 1.83
PFN1-202ENST00000572383 NRXN3Q9Y4C0 1643 aa26.5■■□□□ 1.83
PFN1-202ENST00000572383 ADAMTS13Q76LX8 1427 aa26.49■■□□□ 1.83
PFN1-202ENST00000572383 RPGRIP1LQ68CZ1 1315 aa26.49■■□□□ 1.83
PFN1-202ENST00000572383 PROSER2Q86WR7 435 aaPredicted RBP26.49■■□□□ 1.83
PFN1-202ENST00000572383 ROBO1Q9Y6N7 1651 aa26.49■■□□□ 1.83
PFN1-202ENST00000572383 PPLO60437 1756 aa26.47■■□□□ 1.83
PFN1-202ENST00000572383 PIK3R4Q99570 1358 aa26.46■■□□□ 1.83
PFN1-202ENST00000572383 RBM33Q96EV2 1170 aaKnown RBP26.46■■□□□ 1.83
PFN1-202ENST00000572383 VGFO15240 615 aaPredicted RBP26.44■■□□□ 1.82
PFN1-202ENST00000572383 IFT172Q9UG01 1749 aa26.43■■□□□ 1.82
PFN1-202ENST00000572383 SETBP1Q9Y6X0 1596 aa26.43■■□□□ 1.82
PFN1-202ENST00000572383 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.4■■□□□ 1.82
PFN1-202ENST00000572383 ADGRF5Q8IZF2 1346 aa26.39■■□□□ 1.81
PFN1-202ENST00000572383 XRN1Q8IZH2 1706 aaKnown RBP26.38■■□□□ 1.81
PFN1-202ENST00000572383 FAM135BQ49AJ0 1406 aa26.38■■□□□ 1.81
PFN1-202ENST00000572383 NCOA3Q9Y6Q9 1424 aa26.38■■□□□ 1.81
PFN1-202ENST00000572383 MSH6P52701 1360 aa26.37■■□□□ 1.81
PFN1-202ENST00000572383 SIN3AQ96ST3 1273 aa26.36■■□□□ 1.81
PFN1-202ENST00000572383 SETD1AO15047 1707 aaKnown RBP26.34■■□□□ 1.81
PFN1-202ENST00000572383 PHLPP1O60346 1717 aa26.34■■□□□ 1.81
PFN1-202ENST00000572383 PTPRUQ92729 1446 aa26.33■■□□□ 1.81
PFN1-202ENST00000572383 SOCS7O14512 581 aa26.32■■□□□ 1.8
PFN1-202ENST00000572383 METP08581 1390 aa26.32■■□□□ 1.8
PFN1-202ENST00000572383 MYOM2P54296 1465 aa26.31■■□□□ 1.8
PFN1-202ENST00000572383 DCAF11Q8TEB1 546 aa26.31■■□□□ 1.8
PFN1-202ENST00000572383 AMOTL2Q9Y2J4 779 aa26.31■■□□□ 1.8
PFN1-202ENST00000572383 NEUROD1Q13562 356 aa26.3■■□□□ 1.8
PFN1-202ENST00000572383 KDM2AQ9Y2K7 1162 aa26.29■■□□□ 1.8
PFN1-202ENST00000572383 PIK3C2GO75747 1445 aa26.29■■□□□ 1.8
PFN1-202ENST00000572383 NRXN1Q9ULB1 1477 aa26.28■■□□□ 1.8
PFN1-202ENST00000572383 C14orf37Q86TY3 774 aa26.26■■□□□ 1.79
PFN1-202ENST00000572383 SLAIN2Q9P270 581 aa26.26■■□□□ 1.79
PFN1-202ENST00000572383 C19orf44Q9H6X5 657 aa26.25■■□□□ 1.79
PFN1-202ENST00000572383 NALCNQ8IZF0 1738 aa26.24■■□□□ 1.79
PFN1-202ENST00000572383 COL16A1Q07092 1604 aaPredicted RBP26.24■■□□□ 1.79
PFN1-202ENST00000572383 CADPS2Q86UW7 1296 aa26.21■■□□□ 1.79
PFN1-202ENST00000572383 STAC3Q96MF2 364 aa26.21■■□□□ 1.79
PFN1-202ENST00000572383 CFAP70Q5T0N1 1121 aa26.2■■□□□ 1.78
PFN1-202ENST00000572383 ATF3P18847 181 aa26.19■■□□□ 1.78
PFN1-202ENST00000572383 L3MBTL2Q969R5 705 aa26.19■■□□□ 1.78
PFN1-202ENST00000572383 C14orf93Q9H972 538 aaKnown RBP26.19■■□□□ 1.78
PFN1-202ENST00000572383 DCCP43146 1447 aa26.19■■□□□ 1.78
PFN1-202ENST00000572383 ASXL1Q8IXJ9 1541 aa26.18■■□□□ 1.78
PFN1-202ENST00000572383 TMEM132EQ6IEE7 984 aa26.17■■□□□ 1.78
PFN1-202ENST00000572383 LAMC1P11047 1609 aa26.16■■□□□ 1.78
PFN1-202ENST00000572383 AHDC1Q5TGY3 1603 aaPredicted RBP26.16■■□□□ 1.78
PFN1-202ENST00000572383 PHF23Q9BUL5 403 aaPredicted RBP26.15■■□□□ 1.78
PFN1-202ENST00000572383 PTCH1Q13635 1447 aa26.14■■□□□ 1.77
PFN1-202ENST00000572383 PRAG1Q86YV5 1406 aa26.14■■□□□ 1.77
PFN1-202ENST00000572383 NHSL1Q5SYE7 1610 aa26.13■■□□□ 1.77
PFN1-202ENST00000572383 SHPRHQ149N8 1683 aa26.12■■□□□ 1.77
PFN1-202ENST00000572383 ADGRL3Q9HAR2 1447 aa26.12■■□□□ 1.77
PFN1-202ENST00000572383 STK26Q9P289 416 aa26.11■■□□□ 1.77
PFN1-202ENST00000572383 RGS17Q9UGC6 210 aaPredicted RBP26.11■■□□□ 1.77
PFN1-202ENST00000572383 LRPPRCP42704 1394 aaKnown RBP26.09■■□□□ 1.77
PFN1-202ENST00000572383 ROBO2Q9HCK4 1378 aa26.09■■□□□ 1.77
PFN1-202ENST00000572383 YTHDC2Q9H6S0 1430 aaKnown RBP26.09■■□□□ 1.77
PFN1-202ENST00000572383 TONSLQ96HA7 1378 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms