RNA–Protein interactions for RNA: ENST00000572116.1

ATP2A3-210, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 1 (best)

Gene ATP2A3, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-210ENST00000572116 ANKRD30BQ9BXX2 1392 aa16.99■□□□□ 0.31
ATP2A3-210ENST00000572116 NPHP4O75161 1426 aaPredicted RBP16.97■□□□□ 0.31
ATP2A3-210ENST00000572116 ZNF326Q5BKZ1 582 aaKnown RBP16.97■□□□□ 0.31
ATP2A3-210ENST00000572116 DMRT2Q9Y5R5 561 aa16.97■□□□□ 0.31
ATP2A3-210ENST00000572116 EID1Q9Y6B2 187 aa16.97■□□□□ 0.31
ATP2A3-210ENST00000572116 DHX57Q6P158 1386 aaKnown RBP16.97■□□□□ 0.31
ATP2A3-210ENST00000572116 STRCP1A6NGW2 1772 aa16.97■□□□□ 0.31
ATP2A3-210ENST00000572116 LTKP29376 864 aa16.96■□□□□ 0.31
ATP2A3-210ENST00000572116 TXNDC2Q86VQ3 553 aa16.96■□□□□ 0.31
ATP2A3-210ENST00000572116 CHD2O14647 1828 aaKnown RBP16.96■□□□□ 0.3
ATP2A3-210ENST00000572116 NRXN3Q9Y4C0 1643 aa16.96■□□□□ 0.3
ATP2A3-210ENST00000572116 SPATA31E1Q6ZUB1 1445 aa16.95■□□□□ 0.3
ATP2A3-210ENST00000572116 SETD1AO15047 1707 aaKnown RBP16.93■□□□□ 0.3
ATP2A3-210ENST00000572116 PPP1R15AO75807 674 aaPredicted RBP16.92■□□□□ 0.3
ATP2A3-210ENST00000572116 HDGFP51858 240 aaKnown RBP16.92■□□□□ 0.3
ATP2A3-210ENST00000572116 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.92■□□□□ 0.3
ATP2A3-210ENST00000572116 DIP2AQ14689 1571 aa16.91■□□□□ 0.3
ATP2A3-210ENST00000572116 NUTM2DQ5VT03 806 aaPredicted RBP16.91■□□□□ 0.3
ATP2A3-210ENST00000572116 PLEKHG1Q9ULL1 1385 aa16.9■□□□□ 0.3
ATP2A3-210ENST00000572116 SETBP1Q9Y6X0 1596 aa16.9■□□□□ 0.3
ATP2A3-210ENST00000572116 XIRP1Q702N8 1843 aaKnown RBP16.89■□□□□ 0.29
ATP2A3-210ENST00000572116 RGL3Q3MIN7 710 aa16.89■□□□□ 0.29
ATP2A3-210ENST00000572116 SENP3Q9H4L4 574 aaPredicted RBP16.89■□□□□ 0.29
ATP2A3-210ENST00000572116 RPGRIP1LQ68CZ1 1315 aa16.88■□□□□ 0.29
ATP2A3-210ENST00000572116 LAMC1P11047 1609 aa16.88■□□□□ 0.29
ATP2A3-210ENST00000572116 BCANQ96GW7 911 aa16.87■□□□□ 0.29
ATP2A3-210ENST00000572116 LTBP4Q8N2S1 1624 aa16.85■□□□□ 0.29
ATP2A3-210ENST00000572116 MYOM2P54296 1465 aa16.84■□□□□ 0.29
ATP2A3-210ENST00000572116 NWD1Q149M9 1564 aa16.84■□□□□ 0.29
ATP2A3-210ENST00000572116 ALKQ9UM73 1620 aa16.84■□□□□ 0.29
ATP2A3-210ENST00000572116 VGFO15240 615 aaPredicted RBP16.83■□□□□ 0.28
ATP2A3-210ENST00000572116 ADAMTS13Q76LX8 1427 aa16.83■□□□□ 0.28
ATP2A3-210ENST00000572116 SLC26A8Q96RN1 970 aa16.83■□□□□ 0.28
ATP2A3-210ENST00000572116 ZNF335Q9H4Z2 1342 aaPredicted RBP16.82■□□□□ 0.28
ATP2A3-210ENST00000572116 XRN1Q8IZH2 1706 aaKnown RBP16.82■□□□□ 0.28
ATP2A3-210ENST00000572116 KIAA1210Q9ULL0 1709 aa16.82■□□□□ 0.28
ATP2A3-210ENST00000572116 SIN3AQ96ST3 1273 aa16.81■□□□□ 0.28
ATP2A3-210ENST00000572116 CPS1P31327 1500 aa16.8■□□□□ 0.28
ATP2A3-210ENST00000572116 NRXN1Q9ULB1 1477 aa16.8■□□□□ 0.28
ATP2A3-210ENST00000572116 KNDC1Q76NI1 1749 aa16.79■□□□□ 0.28
ATP2A3-210ENST00000572116 NEUROD1Q13562 356 aa16.79■□□□□ 0.28
ATP2A3-210ENST00000572116 PIK3C2GO75747 1445 aa16.79■□□□□ 0.28
ATP2A3-210ENST00000572116 ADGRF5Q8IZF2 1346 aa16.78■□□□□ 0.28
ATP2A3-210ENST00000572116 DCAF11Q8TEB1 546 aa16.77■□□□□ 0.28
ATP2A3-210ENST00000572116 TBX22Q9Y458 520 aa16.77■□□□□ 0.28
ATP2A3-210ENST00000572116 KDM2AQ9Y2K7 1162 aa16.76■□□□□ 0.27
ATP2A3-210ENST00000572116 PIK3R4Q99570 1358 aa16.75■□□□□ 0.27
ATP2A3-210ENST00000572116 TRPM1Q7Z4N2 1603 aa16.74■□□□□ 0.27
ATP2A3-210ENST00000572116 NKTRP30414 1462 aaKnown RBP16.74■□□□□ 0.27
ATP2A3-210ENST00000572116 ASXL1Q8IXJ9 1541 aa16.74■□□□□ 0.27
ATP2A3-210ENST00000572116 METP08581 1390 aa16.73■□□□□ 0.27
ATP2A3-210ENST00000572116 PTPRUQ92729 1446 aa16.72■□□□□ 0.27
ATP2A3-210ENST00000572116 LRRC7Q96NW7 1537 aa16.72■□□□□ 0.27
ATP2A3-210ENST00000572116 KCNA6P17658 529 aa16.72■□□□□ 0.27
ATP2A3-210ENST00000572116 CCER1Q8TC90 406 aaPredicted RBP16.72■□□□□ 0.27
ATP2A3-210ENST00000572116 NALCNQ8IZF0 1738 aa16.72■□□□□ 0.27
ATP2A3-210ENST00000572116 STAC3Q96MF2 364 aa16.71■□□□□ 0.27
ATP2A3-210ENST00000572116 IQSEC2Q5JU85 1478 aa16.71■□□□□ 0.27
ATP2A3-210ENST00000572116 CLSPNQ9HAW4 1339 aa16.7■□□□□ 0.26
ATP2A3-210ENST00000572116 ARHGEF28Q8N1W1 1705 aaKnown RBP16.7■□□□□ 0.26
ATP2A3-210ENST00000572116 TONSLQ96HA7 1378 aa16.7■□□□□ 0.26
ATP2A3-210ENST00000572116 CERKQ8TCT0 537 aa16.7■□□□□ 0.26
ATP2A3-210ENST00000572116 L3MBTL2Q969R5 705 aa16.7■□□□□ 0.26
ATP2A3-210ENST00000572116 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.7■□□□□ 0.26
ATP2A3-210ENST00000572116 PRAG1Q86YV5 1406 aa16.69■□□□□ 0.26
ATP2A3-210ENST00000572116 ADGRB1O14514 1584 aa16.68■□□□□ 0.26
ATP2A3-210ENST00000572116 AMOTL2Q9Y2J4 779 aa16.67■□□□□ 0.26
ATP2A3-210ENST00000572116 CFAP70Q5T0N1 1121 aa16.66■□□□□ 0.26
ATP2A3-210ENST00000572116 C14orf93Q9H972 538 aaKnown RBP16.66■□□□□ 0.26
ATP2A3-210ENST00000572116 PROSER2Q86WR7 435 aaPredicted RBP16.65■□□□□ 0.26
ATP2A3-210ENST00000572116 YTHDC2Q9H6S0 1430 aaKnown RBP16.64■□□□□ 0.25
ATP2A3-210ENST00000572116 TMEM132EQ6IEE7 984 aa16.64■□□□□ 0.25
ATP2A3-210ENST00000572116 TMEM94Q12767 1356 aa16.64■□□□□ 0.25
ATP2A3-210ENST00000572116 PTCH1Q13635 1447 aa16.63■□□□□ 0.25
ATP2A3-210ENST00000572116 RGPD8O14715 1765 aaPredicted RBP16.63■□□□□ 0.25
ATP2A3-210ENST00000572116 RBM33Q96EV2 1170 aaKnown RBP16.62■□□□□ 0.25
ATP2A3-210ENST00000572116 QRICH2Q9H0J4 1663 aa16.62■□□□□ 0.25
ATP2A3-210ENST00000572116 LRPPRCP42704 1394 aaKnown RBP16.62■□□□□ 0.25
ATP2A3-210ENST00000572116 TECPR2O15040 1411 aa16.62■□□□□ 0.25
ATP2A3-210ENST00000572116 STK26Q9P289 416 aa16.61■□□□□ 0.25
ATP2A3-210ENST00000572116 DLC1Q96QB1 1528 aa16.6■□□□□ 0.25
ATP2A3-210ENST00000572116 ROBO2Q9HCK4 1378 aa16.6■□□□□ 0.25
ATP2A3-210ENST00000572116 NCOA3Q9Y6Q9 1424 aa16.59■□□□□ 0.25
ATP2A3-210ENST00000572116 ABCC11Q96J66 1382 aa16.58■□□□□ 0.24
ATP2A3-210ENST00000572116 FMN2Q9NZ56 1722 aa16.58■□□□□ 0.24
ATP2A3-210ENST00000572116 MSH6P52701 1360 aa16.57■□□□□ 0.24
ATP2A3-210ENST00000572116 C14orf37Q86TY3 774 aa16.57■□□□□ 0.24
ATP2A3-210ENST00000572116 RALGAPBQ86X10 1494 aa16.56■□□□□ 0.24
ATP2A3-210ENST00000572116 ADGRL3Q9HAR2 1447 aa16.56■□□□□ 0.24
ATP2A3-210ENST00000572116 NBPF8Q3BBV2 869 aa16.56■□□□□ 0.24
ATP2A3-210ENST00000572116 CDC42BPGQ6DT37 1551 aa16.55■□□□□ 0.24
ATP2A3-210ENST00000572116 FAM135BQ49AJ0 1406 aa16.55■□□□□ 0.24
ATP2A3-210ENST00000572116 NBPF1Q3BBV0 1214 aa16.55■□□□□ 0.24
ATP2A3-210ENST00000572116 TIMELESSQ9UNS1 1208 aa16.55■□□□□ 0.24
ATP2A3-210ENST00000572116 ROBO1Q9Y6N7 1651 aa16.55■□□□□ 0.24
ATP2A3-210ENST00000572116 TRAK1Q9UPV9 953 aa16.54■□□□□ 0.24
ATP2A3-210ENST00000572116 ROCK2O75116 1388 aaKnown RBP16.53■□□□□ 0.24
ATP2A3-210ENST00000572116 ADGRB2O60241 1585 aa16.53■□□□□ 0.24
ATP2A3-210ENST00000572116 UBAP1LF5GYI3 381 aa16.53■□□□□ 0.24
ATP2A3-210ENST00000572116 PLEKHH1Q9ULM0 1364 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms