RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 ANKRD30AQ9BXX3 1397 aa17.82■□□□□ 0.44
CHMP6-202ENST00000571457 SPATA31A6Q5VVP1 1343 aa17.82■□□□□ 0.44
CHMP6-202ENST00000571457 ZNF772Q68DY9 489 aaPredicted RBP17.82■□□□□ 0.44
CHMP6-202ENST00000571457 DAPK1P53355 1430 aa17.81■□□□□ 0.44
CHMP6-202ENST00000571457 MEX3CQ5U5Q3 659 aaKnown RBP17.8■□□□□ 0.44
CHMP6-202ENST00000571457 FGD6Q6ZV73 1430 aa17.8■□□□□ 0.44
CHMP6-202ENST00000571457 NCOA3Q9Y6Q9 1424 aa17.8■□□□□ 0.44
CHMP6-202ENST00000571457 PTPN23Q9H3S7 1636 aa17.8■□□□□ 0.44
CHMP6-202ENST00000571457 PLEKHG1Q9ULL1 1385 aa17.79■□□□□ 0.44
CHMP6-202ENST00000571457 PPP1R15AO75807 674 aaPredicted RBP17.79■□□□□ 0.44
CHMP6-202ENST00000571457 C14orf37Q86TY3 774 aa17.78■□□□□ 0.44
CHMP6-202ENST00000571457 COL16A1Q07092 1604 aaPredicted RBP17.77■□□□□ 0.44
CHMP6-202ENST00000571457 UPF1Q92900 1129 aaKnown RBP eCLIP17.77■□□□□ 0.444e-9■■■■□ 23.1
CHMP6-202ENST00000571457 CHIC2Q9UKJ5 165 aa17.77■□□□□ 0.44
CHMP6-202ENST00000571457 CHD2O14647 1828 aaKnown RBP17.77■□□□□ 0.43
CHMP6-202ENST00000571457 RPRD2Q5VT52 1461 aaKnown RBP17.76■□□□□ 0.43
CHMP6-202ENST00000571457 APLP2Q06481 763 aa17.76■□□□□ 0.43
CHMP6-202ENST00000571457 CADPS2Q86UW7 1296 aa17.76■□□□□ 0.43
CHMP6-202ENST00000571457 TBX22Q9Y458 520 aa17.76■□□□□ 0.43
CHMP6-202ENST00000571457 ZFYVE9O95405 1425 aa17.75■□□□□ 0.43
CHMP6-202ENST00000571457 RIMS2Q9UQ26 1411 aa17.74■□□□□ 0.43
CHMP6-202ENST00000571457 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.74■□□□□ 0.43
CHMP6-202ENST00000571457 TRIM52Q96A61 297 aa17.74■□□□□ 0.43
CHMP6-202ENST00000571457 LRP6O75581 1613 aa17.73■□□□□ 0.43
CHMP6-202ENST00000571457 ATF3P18847 181 aa17.73■□□□□ 0.43
CHMP6-202ENST00000571457 RXRBP28702 533 aa17.73■□□□□ 0.43
CHMP6-202ENST00000571457 C19orf44Q9H6X5 657 aa17.73■□□□□ 0.43
CHMP6-202ENST00000571457 AHDC1Q5TGY3 1603 aaPredicted RBP17.71■□□□□ 0.43
CHMP6-202ENST00000571457 PIK3R4Q99570 1358 aa17.7■□□□□ 0.42
CHMP6-202ENST00000571457 SHPRHQ149N8 1683 aa17.7■□□□□ 0.42
CHMP6-202ENST00000571457 TMEM131LA2VDJ0 1609 aa17.68■□□□□ 0.42
CHMP6-202ENST00000571457 ADGRL2O95490 1459 aa17.68■□□□□ 0.42
CHMP6-202ENST00000571457 CDK12Q9NYV4 1490 aaPredicted RBP17.68■□□□□ 0.42
CHMP6-202ENST00000571457 MYO5BQ9ULV0 1848 aa17.68■□□□□ 0.42
CHMP6-202ENST00000571457 GCC2Q8IWJ2 1684 aa17.67■□□□□ 0.42
CHMP6-202ENST00000571457 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.67■□□□□ 0.42
CHMP6-202ENST00000571457 DIP2AQ14689 1571 aa17.67■□□□□ 0.42
CHMP6-202ENST00000571457 ANKRD50Q9ULJ7 1429 aa17.67■□□□□ 0.42
CHMP6-202ENST00000571457 LOC105371045A0A1W2PR82 267 aa17.66■□□□□ 0.42
CHMP6-202ENST00000571457 CHGAP10645 457 aaKnown RBP17.66■□□□□ 0.42
CHMP6-202ENST00000571457 BRINP3Q76B58 766 aa17.65■□□□□ 0.42
CHMP6-202ENST00000571457 ADAMTS13Q76LX8 1427 aa17.64■□□□□ 0.42
CHMP6-202ENST00000571457 NUTM2BA6NNL0 878 aaPredicted RBP17.64■□□□□ 0.41
CHMP6-202ENST00000571457 NUTM2EB1AL46 878 aaPredicted RBP17.64■□□□□ 0.41
CHMP6-202ENST00000571457 NUTM2AQ8IVF1 878 aaPredicted RBP17.64■□□□□ 0.41
CHMP6-202ENST00000571457 DCCP43146 1447 aa17.63■□□□□ 0.41
CHMP6-202ENST00000571457 SRCAPQ6ZRS2 3230 aa17.62■□□□□ 0.41
CHMP6-202ENST00000571457 AMOTL2Q9Y2J4 779 aa17.62■□□□□ 0.41
CHMP6-202ENST00000571457 AFF2P51816 1311 aa17.62■□□□□ 0.41
CHMP6-202ENST00000571457 NUTM2DQ5VT03 806 aaPredicted RBP17.61■□□□□ 0.41
CHMP6-202ENST00000571457 TRPM2O94759 1503 aa17.61■□□□□ 0.41
CHMP6-202ENST00000571457 LRRC59Q96AG4 307 aaKnown RBP17.6■□□□□ 0.41
CHMP6-202ENST00000571457 SETD5Q9C0A6 1442 aa17.59■□□□□ 0.41
CHMP6-202ENST00000571457 FAM50AQ14320 339 aaKnown RBP17.59■□□□□ 0.41
CHMP6-202ENST00000571457 ASXL1Q8IXJ9 1541 aa17.57■□□□□ 0.4
CHMP6-202ENST00000571457 RBM6P78332 1123 aaKnown RBP17.57■□□□□ 0.4
CHMP6-202ENST00000571457 QTRT2Q9H974 415 aaKnown RBP17.56■□□□□ 0.4
CHMP6-202ENST00000571457 UNC13BO14795 1591 aa17.55■□□□□ 0.4
CHMP6-202ENST00000571457 C8orf37Q96NL8 207 aa17.55■□□□□ 0.4
CHMP6-202ENST00000571457 PTPRUQ92729 1446 aa17.55■□□□□ 0.4
CHMP6-202ENST00000571457 MST1RQ04912 1400 aa17.54■□□□□ 0.4
CHMP6-202ENST00000571457 E9PCH4 1651 aa17.53■□□□□ 0.4
CHMP6-202ENST00000571457 FOXD1Q16676 465 aa17.53■□□□□ 0.4
CHMP6-202ENST00000571457 NGLY1Q96IV0 654 aa17.53■□□□□ 0.4
CHMP6-202ENST00000571457 RGS12O14924 1447 aa17.53■□□□□ 0.4
CHMP6-202ENST00000571457 NHSL1Q5SYE7 1610 aa17.52■□□□□ 0.4
CHMP6-202ENST00000571457 PNPLA6Q8IY17 1366 aa17.51■□□□□ 0.39
CHMP6-202ENST00000571457 XRN1Q8IZH2 1706 aaKnown RBP17.5■□□□□ 0.39
CHMP6-202ENST00000571457 IQGAP3Q86VI3 1631 aa17.49■□□□□ 0.39
CHMP6-202ENST00000571457 ATAD2Q6PL18 1390 aa17.49■□□□□ 0.39
CHMP6-202ENST00000571457 SETBP1Q9Y6X0 1596 aa17.49■□□□□ 0.39
CHMP6-202ENST00000571457 ADGRL3Q9HAR2 1447 aa17.48■□□□□ 0.39
CHMP6-202ENST00000571457 NUP155O75694 1391 aa17.47■□□□□ 0.39
CHMP6-202ENST00000571457 ROCK1Q13464 1354 aa17.46■□□□□ 0.39
CHMP6-202ENST00000571457 ADAMTS2O95450 1211 aa17.46■□□□□ 0.39
CHMP6-202ENST00000571457 ZNF326Q5BKZ1 582 aaKnown RBP17.46■□□□□ 0.39
CHMP6-202ENST00000571457 NRXN3Q9Y4C0 1643 aa17.46■□□□□ 0.39
CHMP6-202ENST00000571457 DDX17Q92841 729 aaKnown RBP17.45■□□□□ 0.38
CHMP6-202ENST00000571457 METP08581 1390 aa17.44■□□□□ 0.38
CHMP6-202ENST00000571457 ZRANB1Q9UGI0 708 aa17.44■□□□□ 0.38
CHMP6-202ENST00000571457 TRPC5Q9UL62 973 aaPredicted RBP17.44■□□□□ 0.38
CHMP6-202ENST00000571457 USP21Q9UK80 565 aa17.43■□□□□ 0.38
CHMP6-202ENST00000571457 C1orf167Q5SNV9 1468 aa17.41■□□□□ 0.38
CHMP6-202ENST00000571457 PTCH1Q13635 1447 aa17.4■□□□□ 0.38
CHMP6-202ENST00000571457 CCDC125Q86Z20 511 aa17.4■□□□□ 0.38
CHMP6-202ENST00000571457 NALCNQ8IZF0 1738 aa17.39■□□□□ 0.37
CHMP6-202ENST00000571457 FNBP4Q8N3X1 1017 aaPredicted RBP17.39■□□□□ 0.37
CHMP6-202ENST00000571457 SOS2Q07890 1332 aaPredicted RBP17.39■□□□□ 0.37
CHMP6-202ENST00000571457 LAMC1P11047 1609 aa17.39■□□□□ 0.37
CHMP6-202ENST00000571457 SPHKAPQ2M3C7 1700 aa17.38■□□□□ 0.37
CHMP6-202ENST00000571457 EP400Q96L91 3159 aa17.38■□□□□ 0.37
CHMP6-202ENST00000571457 ORAI2Q96SN7 254 aa17.35■□□□□ 0.37
CHMP6-202ENST00000571457 ATRNO75882 1429 aa17.35■□□□□ 0.37
CHMP6-202ENST00000571457 NEXMIFQ5QGS0 1516 aa17.33■□□□□ 0.37
CHMP6-202ENST00000571457 VGFO15240 615 aaPredicted RBP17.32■□□□□ 0.36
CHMP6-202ENST00000571457 COL22A1Q8NFW1 1626 aaPredicted RBP17.31■□□□□ 0.36
CHMP6-202ENST00000571457 ROBO2Q9HCK4 1378 aa17.3■□□□□ 0.36
CHMP6-202ENST00000571457 NPHP3Q7Z494 1330 aa17.3■□□□□ 0.36
CHMP6-202ENST00000571457 ITGAEP38570 1179 aa17.3■□□□□ 0.36
CHMP6-202ENST00000571457 HFM1A2PYH4 1435 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms