RNA–Protein interactions for RNA: ENST00000569904.5

SCAMP2-212, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-212ENST00000569904 RRBP1Q9P2E9 1410 aaKnown RBP19.01■□□□□ 0.63
SCAMP2-212ENST00000569904 PLEKHG1Q9ULL1 1385 aa19.01■□□□□ 0.63
SCAMP2-212ENST00000569904 SCAF1Q9H7N4 1312 aaKnown RBP19■□□□□ 0.63
SCAMP2-212ENST00000569904 KCNA6P17658 529 aa19■□□□□ 0.63
SCAMP2-212ENST00000569904 SPHKAPQ2M3C7 1700 aa18.99■□□□□ 0.63
SCAMP2-212ENST00000569904 RIMS2Q9UQ26 1411 aa18.99■□□□□ 0.63
SCAMP2-212ENST00000569904 DIP2AQ14689 1571 aa18.98■□□□□ 0.63
SCAMP2-212ENST00000569904 NUP155O75694 1391 aa18.97■□□□□ 0.63
SCAMP2-212ENST00000569904 SOCS7O14512 581 aa18.96■□□□□ 0.63
SCAMP2-212ENST00000569904 SLC26A8Q96RN1 970 aa18.96■□□□□ 0.63
SCAMP2-212ENST00000569904 TMEM94Q12767 1356 aa18.95■□□□□ 0.62
SCAMP2-212ENST00000569904 HDGFP51858 240 aaKnown RBP18.95■□□□□ 0.62
SCAMP2-212ENST00000569904 FAM135BQ49AJ0 1406 aa18.94■□□□□ 0.62
SCAMP2-212ENST00000569904 PPARGC1BQ86YN6 1023 aaKnown RBP18.92■□□□□ 0.62
SCAMP2-212ENST00000569904 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.92■□□□□ 0.62
SCAMP2-212ENST00000569904 ADAMTS13Q76LX8 1427 aa18.91■□□□□ 0.62
SCAMP2-212ENST00000569904 ITGAEP38570 1179 aa18.91■□□□□ 0.62
SCAMP2-212ENST00000569904 TBX22Q9Y458 520 aa18.91■□□□□ 0.62
SCAMP2-212ENST00000569904 ROBO1Q9Y6N7 1651 aa18.91■□□□□ 0.62
SCAMP2-212ENST00000569904 NAIPQ13075 1403 aa18.91■□□□□ 0.62
SCAMP2-212ENST00000569904 PIK3R4Q99570 1358 aa18.9■□□□□ 0.62
SCAMP2-212ENST00000569904 NCOA3Q9Y6Q9 1424 aa18.9■□□□□ 0.62
SCAMP2-212ENST00000569904 NRXN3Q9Y4C0 1643 aa18.89■□□□□ 0.61
SCAMP2-212ENST00000569904 PROSER2Q86WR7 435 aaPredicted RBP18.88■□□□□ 0.61
SCAMP2-212ENST00000569904 TRPM2O94759 1503 aa18.88■□□□□ 0.61
SCAMP2-212ENST00000569904 PPP1R15AO75807 674 aaPredicted RBP18.87■□□□□ 0.61
SCAMP2-212ENST00000569904 SETBP1Q9Y6X0 1596 aa18.87■□□□□ 0.61
SCAMP2-212ENST00000569904 CLTCL1P53675 1640 aa18.86■□□□□ 0.61
SCAMP2-212ENST00000569904 HFM1A2PYH4 1435 aa18.85■□□□□ 0.61
SCAMP2-212ENST00000569904 KIF1BO60333 1816 aa18.85■□□□□ 0.61
SCAMP2-212ENST00000569904 MSH6P52701 1360 aa18.84■□□□□ 0.61
SCAMP2-212ENST00000569904 CHGAP10645 457 aaKnown RBP18.84■□□□□ 0.61
SCAMP2-212ENST00000569904 BCANQ96GW7 911 aa18.84■□□□□ 0.61
SCAMP2-212ENST00000569904 XRN1Q8IZH2 1706 aaKnown RBP18.83■□□□□ 0.61
SCAMP2-212ENST00000569904 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.83■□□□□ 0.6
SCAMP2-212ENST00000569904 NEXMIFQ5QGS0 1516 aa18.82■□□□□ 0.6
SCAMP2-212ENST00000569904 RBM33Q96EV2 1170 aaKnown RBP18.81■□□□□ 0.6
SCAMP2-212ENST00000569904 PHLPP1O60346 1717 aa18.8■□□□□ 0.6
SCAMP2-212ENST00000569904 PTPRUQ92729 1446 aa18.79■□□□□ 0.6
SCAMP2-212ENST00000569904 NUTM2DQ5VT03 806 aaPredicted RBP18.78■□□□□ 0.6
SCAMP2-212ENST00000569904 SLAIN2Q9P270 581 aa18.77■□□□□ 0.6
SCAMP2-212ENST00000569904 COL16A1Q07092 1604 aaPredicted RBP18.76■□□□□ 0.59
SCAMP2-212ENST00000569904 SETD1AO15047 1707 aaKnown RBP18.76■□□□□ 0.59
SCAMP2-212ENST00000569904 SENP3Q9H4L4 574 aaPredicted RBP18.75■□□□□ 0.59
SCAMP2-212ENST00000569904 DCCP43146 1447 aa18.74■□□□□ 0.59
SCAMP2-212ENST00000569904 AHDC1Q5TGY3 1603 aaPredicted RBP18.74■□□□□ 0.59
SCAMP2-212ENST00000569904 PHF23Q9BUL5 403 aaPredicted RBP18.73■□□□□ 0.59
SCAMP2-212ENST00000569904 C19orf44Q9H6X5 657 aa18.73■□□□□ 0.59
SCAMP2-212ENST00000569904 AMOTL2Q9Y2J4 779 aa18.73■□□□□ 0.59
SCAMP2-212ENST00000569904 PPLO60437 1756 aa18.73■□□□□ 0.59
SCAMP2-212ENST00000569904 CADPS2Q86UW7 1296 aa18.71■□□□□ 0.59
SCAMP2-212ENST00000569904 METP08581 1390 aa18.7■□□□□ 0.58
SCAMP2-212ENST00000569904 ZNF326Q5BKZ1 582 aaKnown RBP18.7■□□□□ 0.58
SCAMP2-212ENST00000569904 RGS17Q9UGC6 210 aaPredicted RBP18.7■□□□□ 0.58
SCAMP2-212ENST00000569904 PRAG1Q86YV5 1406 aa18.69■□□□□ 0.58
SCAMP2-212ENST00000569904 SHPRHQ149N8 1683 aa18.69■□□□□ 0.58
SCAMP2-212ENST00000569904 NALCNQ8IZF0 1738 aa18.69■□□□□ 0.58
SCAMP2-212ENST00000569904 JCADQ9P266 1359 aa18.68■□□□□ 0.58
SCAMP2-212ENST00000569904 NHSL1Q5SYE7 1610 aa18.66■□□□□ 0.58
SCAMP2-212ENST00000569904 IFT172Q9UG01 1749 aa18.66■□□□□ 0.58
SCAMP2-212ENST00000569904 ATF3P18847 181 aa18.65■□□□□ 0.58
SCAMP2-212ENST00000569904 TRIM52Q96A61 297 aa18.65■□□□□ 0.58
SCAMP2-212ENST00000569904 SLC4A1APQ9BWU0 796 aaKnown RBP18.65■□□□□ 0.58
SCAMP2-212ENST00000569904 RPGRIP1LQ68CZ1 1315 aa18.65■□□□□ 0.58
SCAMP2-212ENST00000569904 PTCH1Q13635 1447 aa18.65■□□□□ 0.58
SCAMP2-212ENST00000569904 C14orf37Q86TY3 774 aa18.64■□□□□ 0.57
SCAMP2-212ENST00000569904 MST1RQ04912 1400 aa18.64■□□□□ 0.57
SCAMP2-212ENST00000569904 ADGRL3Q9HAR2 1447 aa18.64■□□□□ 0.57
SCAMP2-212ENST00000569904 VGFO15240 615 aaPredicted RBP18.63■□□□□ 0.57
SCAMP2-212ENST00000569904 ASXL1Q8IXJ9 1541 aa18.63■□□□□ 0.57
SCAMP2-212ENST00000569904 LAMC1P11047 1609 aa18.61■□□□□ 0.57
SCAMP2-212ENST00000569904 BRINP3Q76B58 766 aa18.61■□□□□ 0.57
SCAMP2-212ENST00000569904 SPATA31A6Q5VVP1 1343 aa18.6■□□□□ 0.57
SCAMP2-212ENST00000569904 LRP6O75581 1613 aa18.59■□□□□ 0.57
SCAMP2-212ENST00000569904 SPATA31E1Q6ZUB1 1445 aa18.58■□□□□ 0.57
SCAMP2-212ENST00000569904 ACIN1Q9UKV3 1341 aaKnown RBP18.58■□□□□ 0.57
SCAMP2-212ENST00000569904 CCDC144AA2RUR9 1427 aa18.57■□□□□ 0.56
SCAMP2-212ENST00000569904 SETD5Q9C0A6 1442 aa18.57■□□□□ 0.56
SCAMP2-212ENST00000569904 POTEAQ6S8J7 498 aa18.56■□□□□ 0.56
SCAMP2-212ENST00000569904 KNDC1Q76NI1 1749 aa18.55■□□□□ 0.56
SCAMP2-212ENST00000569904 MPHOSPH9Q99550 1183 aa18.55■□□□□ 0.56
SCAMP2-212ENST00000569904 ROBO2Q9HCK4 1378 aa18.55■□□□□ 0.56
SCAMP2-212ENST00000569904 FOXD1Q16676 465 aa18.54■□□□□ 0.56
SCAMP2-212ENST00000569904 C1orf167Q5SNV9 1468 aa18.52■□□□□ 0.56
SCAMP2-212ENST00000569904 ANKRD30BQ9BXX2 1392 aa18.52■□□□□ 0.55
SCAMP2-212ENST00000569904 CDC42BPGQ6DT37 1551 aa18.51■□□□□ 0.55
SCAMP2-212ENST00000569904 TECPR2O15040 1411 aa18.51■□□□□ 0.55
SCAMP2-212ENST00000569904 PIK3C2GO75747 1445 aa18.49■□□□□ 0.55
SCAMP2-212ENST00000569904 ADGRF5Q8IZF2 1346 aa18.49■□□□□ 0.55
SCAMP2-212ENST00000569904 LRRC59Q96AG4 307 aaKnown RBP18.47■□□□□ 0.55
SCAMP2-212ENST00000569904 NRXN1Q9ULB1 1477 aa18.46■□□□□ 0.55
SCAMP2-212ENST00000569904 PNPLA6Q8IY17 1366 aa18.45■□□□□ 0.54
SCAMP2-212ENST00000569904 MYOM2P54296 1465 aa18.45■□□□□ 0.54
SCAMP2-212ENST00000569904 COL22A1Q8NFW1 1626 aaPredicted RBP18.45■□□□□ 0.54
SCAMP2-212ENST00000569904 LRPPRCP42704 1394 aaKnown RBP18.44■□□□□ 0.54
SCAMP2-212ENST00000569904 ABCC11Q96J66 1382 aa18.44■□□□□ 0.54
SCAMP2-212ENST00000569904 ZNF772Q68DY9 489 aaPredicted RBP18.43■□□□□ 0.54
SCAMP2-212ENST00000569904 SOS2Q07890 1332 aaPredicted RBP18.43■□□□□ 0.54
SCAMP2-212ENST00000569904 RAB3GAP2Q9H2M9 1393 aa18.42■□□□□ 0.54
SCAMP2-212ENST00000569904 RGL3Q3MIN7 710 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms