RNA–Protein interactions for RNA: ENST00000569573.1

E2F4-213, Transcript of E2F transcription factor 4, humanhuman

TSL 3

Gene E2F4, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F4-213ENST00000569573 FAM135BQ49AJ0 1406 aa39.4■■■■□ 3.9
E2F4-213ENST00000569573 RBM33Q96EV2 1170 aaKnown RBP39.4■■■■□ 3.9
E2F4-213ENST00000569573 NKTRP30414 1462 aaKnown RBP39.37■■■■□ 3.89
E2F4-213ENST00000569573 CHGAP10645 457 aaKnown RBP39.35■■■■□ 3.89
E2F4-213ENST00000569573 RIMS2Q9UQ26 1411 aa39.34■■■■□ 3.89
E2F4-213ENST00000569573 GCC2Q8IWJ2 1684 aa39.34■■■■□ 3.89
E2F4-213ENST00000569573 PLEKHG1Q9ULL1 1385 aa39.33■■■■□ 3.89
E2F4-213ENST00000569573 NWD1Q149M9 1564 aa39.33■■■■□ 3.89
E2F4-213ENST00000569573 UNC13BO14795 1591 aa39.33■■■■□ 3.89
E2F4-213ENST00000569573 MSH6P52701 1360 aa39.32■■■■□ 3.88
E2F4-213ENST00000569573 ZFYVE9O95405 1425 aa39.31■■■■□ 3.88
E2F4-213ENST00000569573 MYO5BQ9ULV0 1848 aa39.3■■■■□ 3.88
E2F4-213ENST00000569573 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.28■■■■□ 3.88
E2F4-213ENST00000569573 ROCK1Q13464 1354 aa39.28■■■■□ 3.88
E2F4-213ENST00000569573 TMEM131LA2VDJ0 1609 aa39.28■■■■□ 3.88
E2F4-213ENST00000569573 ROBO1Q9Y6N7 1651 aa39.28■■■■□ 3.88
E2F4-213ENST00000569573 ITGAEP38570 1179 aa39.24■■■■□ 3.87
E2F4-213ENST00000569573 E9PCH4 1651 aa39.21■■■■□ 3.87
E2F4-213ENST00000569573 NUTM2DQ5VT03 806 aaPredicted RBP39.19■■■■□ 3.86
E2F4-213ENST00000569573 SLAIN2Q9P270 581 aa39.19■■■■□ 3.86
E2F4-213ENST00000569573 TBX22Q9Y458 520 aa39.19■■■■□ 3.86
E2F4-213ENST00000569573 CHD2O14647 1828 aaKnown RBP39.18■■■■□ 3.86
E2F4-213ENST00000569573 NUP155O75694 1391 aa39.18■■■■□ 3.86
E2F4-213ENST00000569573 IQGAP3Q86VI3 1631 aa39.18■■■■□ 3.86
E2F4-213ENST00000569573 C14orf37Q86TY3 774 aa39.17■■■■□ 3.86
E2F4-213ENST00000569573 RGS17Q9UGC6 210 aaPredicted RBP39.16■■■■□ 3.86
E2F4-213ENST00000569573 PPARGC1BQ86YN6 1023 aaKnown RBP39.09■■■■□ 3.85
E2F4-213ENST00000569573 DIP2AQ14689 1571 aa39.08■■■■□ 3.85
E2F4-213ENST00000569573 NCOA3Q9Y6Q9 1424 aa39.07■■■■□ 3.85
E2F4-213ENST00000569573 PHLPP1O60346 1717 aa39.07■■■■□ 3.85
E2F4-213ENST00000569573 ADAMTS13Q76LX8 1427 aa39.06■■■■□ 3.84
E2F4-213ENST00000569573 PIK3R4Q99570 1358 aa39.04■■■■□ 3.84
E2F4-213ENST00000569573 JCADQ9P266 1359 aa39.01■■■■□ 3.84
E2F4-213ENST00000569573 ATF3P18847 181 aa39■■■■□ 3.83
E2F4-213ENST00000569573 TRPM2O94759 1503 aa38.99■■■■□ 3.83
E2F4-213ENST00000569573 CADPS2Q86UW7 1296 aa38.99■■■■□ 3.83
E2F4-213ENST00000569573 C19orf44Q9H6X5 657 aa38.98■■■■□ 3.83
E2F4-213ENST00000569573 POTEAQ6S8J7 498 aa38.97■■■■□ 3.83
E2F4-213ENST00000569573 AMOTL2Q9Y2J4 779 aa38.96■■■■□ 3.83
E2F4-213ENST00000569573 ZNF326Q5BKZ1 582 aaKnown RBP38.95■■■■□ 3.83
E2F4-213ENST00000569573 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.92■■■■□ 3.82
E2F4-213ENST00000569573 SPHKAPQ2M3C7 1700 aa38.9■■■■□ 3.82
E2F4-213ENST00000569573 COL16A1Q07092 1604 aaPredicted RBP38.89■■■■□ 3.82
E2F4-213ENST00000569573 PTPRUQ92729 1446 aa38.86■■■■□ 3.81
E2F4-213ENST00000569573 MEX3CQ5U5Q3 659 aaKnown RBP38.84■■■■□ 3.81
E2F4-213ENST00000569573 SPATA31A6Q5VVP1 1343 aa38.83■■■■□ 3.81
E2F4-213ENST00000569573 SETBP1Q9Y6X0 1596 aa38.8■■■■□ 3.8
E2F4-213ENST00000569573 AHDC1Q5TGY3 1603 aaPredicted RBP38.79■■■■□ 3.8
E2F4-213ENST00000569573 NRXN3Q9Y4C0 1643 aa38.77■■■■□ 3.8
E2F4-213ENST00000569573 DCCP43146 1447 aa38.76■■■■□ 3.8
E2F4-213ENST00000569573 BRINP3Q76B58 766 aa38.75■■■■□ 3.79
E2F4-213ENST00000569573 XRN1Q8IZH2 1706 aaKnown RBP38.75■■■■□ 3.79
E2F4-213ENST00000569573 METP08581 1390 aa38.71■■■■□ 3.79
E2F4-213ENST00000569573 LRP6O75581 1613 aa38.71■■■■□ 3.79
E2F4-213ENST00000569573 CLTCL1P53675 1640 aa38.71■■■■□ 3.79
E2F4-213ENST00000569573 RRBP1Q9P2E9 1410 aaKnown RBP38.71■■■■□ 3.79
E2F4-213ENST00000569573 SHPRHQ149N8 1683 aa38.69■■■■□ 3.78
E2F4-213ENST00000569573 ZNF772Q68DY9 489 aaPredicted RBP38.69■■■■□ 3.78
E2F4-213ENST00000569573 NAIPQ13075 1403 aa38.67■■■■□ 3.78
E2F4-213ENST00000569573 TRIM52Q96A61 297 aa38.67■■■■□ 3.78
E2F4-213ENST00000569573 NEXMIFQ5QGS0 1516 aa38.66■■■■□ 3.78
E2F4-213ENST00000569573 KIF1BO60333 1816 aa38.65■■■■□ 3.78
E2F4-213ENST00000569573 ASXL1Q8IXJ9 1541 aa38.64■■■■□ 3.78
E2F4-213ENST00000569573 NUTM2BA6NNL0 878 aaPredicted RBP38.64■■■■□ 3.78
E2F4-213ENST00000569573 NUTM2EB1AL46 878 aaPredicted RBP38.64■■■■□ 3.78
E2F4-213ENST00000569573 NUTM2AQ8IVF1 878 aaPredicted RBP38.64■■■■□ 3.78
E2F4-213ENST00000569573 SETD1AO15047 1707 aaKnown RBP38.63■■■■□ 3.77
E2F4-213ENST00000569573 MST1RQ04912 1400 aa38.63■■■■□ 3.77
E2F4-213ENST00000569573 ADGRL3Q9HAR2 1447 aa38.6■■■■□ 3.77
E2F4-213ENST00000569573 VGFO15240 615 aaPredicted RBP38.57■■■■□ 3.76
E2F4-213ENST00000569573 LRRC59Q96AG4 307 aaKnown RBP38.55■■■■□ 3.76
E2F4-213ENST00000569573 SETD5Q9C0A6 1442 aa38.54■■■■□ 3.76
E2F4-213ENST00000569573 SLC4A1APQ9BWU0 796 aaKnown RBP38.53■■■■□ 3.76
E2F4-213ENST00000569573 HFM1A2PYH4 1435 aa38.52■■■■□ 3.76
E2F4-213ENST00000569573 NHSL1Q5SYE7 1610 aa38.52■■■■□ 3.76
E2F4-213ENST00000569573 NALCNQ8IZF0 1738 aa38.5■■■■□ 3.75
E2F4-213ENST00000569573 RXRBP28702 533 aa38.48■■■■□ 3.75
E2F4-213ENST00000569573 RPGRIP1LQ68CZ1 1315 aa38.47■■■■□ 3.75
E2F4-213ENST00000569573 DDX17Q92841 729 aaKnown RBP38.46■■■■□ 3.75
E2F4-213ENST00000569573 PTCH1Q13635 1447 aa38.45■■■■□ 3.75
E2F4-213ENST00000569573 AFF2P51816 1311 aa38.44■■■■□ 3.74
E2F4-213ENST00000569573 C1orf167Q5SNV9 1468 aa38.41■■■■□ 3.74
E2F4-213ENST00000569573 ROBO2Q9HCK4 1378 aa38.4■■■■□ 3.74
E2F4-213ENST00000569573 C8orf37Q96NL8 207 aa38.39■■■■□ 3.74
E2F4-213ENST00000569573 PNPLA6Q8IY17 1366 aa38.39■■■■□ 3.74
E2F4-213ENST00000569573 UPF1Q92900 1129 aaKnown RBP eCLIP38.34■■■■□ 3.73
E2F4-213ENST00000569573 PPLO60437 1756 aa38.33■■■■□ 3.73
E2F4-213ENST00000569573 CDK12Q9NYV4 1490 aaPredicted RBP38.31■■■■□ 3.72
E2F4-213ENST00000569573 FOXD1Q16676 465 aa38.31■■■■□ 3.72
E2F4-213ENST00000569573 ORAI2Q96SN7 254 aa38.31■■■■□ 3.72
E2F4-213ENST00000569573 PRAG1Q86YV5 1406 aa38.29■■■■□ 3.72
E2F4-213ENST00000569573 ADAMTS2O95450 1211 aa38.28■■■■□ 3.72
E2F4-213ENST00000569573 NGLY1Q96IV0 654 aa38.27■■■■□ 3.72
E2F4-213ENST00000569573 QTRT2Q9H974 415 aaKnown RBP38.27■■■■□ 3.72
E2F4-213ENST00000569573 CCDC144AA2RUR9 1427 aa38.27■■■■□ 3.72
E2F4-213ENST00000569573 SOS2Q07890 1332 aaPredicted RBP38.24■■■■□ 3.71
E2F4-213ENST00000569573 RBM6P78332 1123 aaKnown RBP38.23■■■■□ 3.71
E2F4-213ENST00000569573 RGL3Q3MIN7 710 aa38.23■■■■□ 3.71
E2F4-213ENST00000569573 LAMC1P11047 1609 aa38.23■■■■□ 3.71
E2F4-213ENST00000569573 ADGRF5Q8IZF2 1346 aa38.19■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms