RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 KIF1BO60333 1816 aa20.58■□□□□ 0.89
HERPUD1-218ENST00000569569 TRPM2O94759 1503 aa20.58■□□□□ 0.88
HERPUD1-218ENST00000569569 ZFYVE9O95405 1425 aa20.56■□□□□ 0.88
HERPUD1-218ENST00000569569 RIMS2Q9UQ26 1411 aa20.56■□□□□ 0.88
HERPUD1-218ENST00000569569 MPHOSPH9Q99550 1183 aa20.56■□□□□ 0.88
HERPUD1-218ENST00000569569 IQSEC2Q5JU85 1478 aa20.56■□□□□ 0.88
HERPUD1-218ENST00000569569 CLTCL1P53675 1640 aa20.55■□□□□ 0.88
HERPUD1-218ENST00000569569 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.54■□□□□ 0.88
HERPUD1-218ENST00000569569 RAB3GAP2Q9H2M9 1393 aa20.54■□□□□ 0.88
HERPUD1-218ENST00000569569 CPS1P31327 1500 aa20.53■□□□□ 0.88
HERPUD1-218ENST00000569569 PPP1R15AO75807 674 aaPredicted RBP20.53■□□□□ 0.88
HERPUD1-218ENST00000569569 STRCP1A6NGW2 1772 aa20.52■□□□□ 0.88
HERPUD1-218ENST00000569569 BCANQ96GW7 911 aa20.51■□□□□ 0.87
HERPUD1-218ENST00000569569 PLEKHG1Q9ULL1 1385 aa20.49■□□□□ 0.87
HERPUD1-218ENST00000569569 HRCP23327 699 aa20.49■□□□□ 0.87
HERPUD1-218ENST00000569569 ZNF326Q5BKZ1 582 aaKnown RBP20.49■□□□□ 0.87
HERPUD1-218ENST00000569569 SLC26A8Q96RN1 970 aa20.49■□□□□ 0.87
HERPUD1-218ENST00000569569 NUTM2DQ5VT03 806 aaPredicted RBP20.47■□□□□ 0.87
HERPUD1-218ENST00000569569 CHD2O14647 1828 aaKnown RBP20.43■□□□□ 0.86
HERPUD1-218ENST00000569569 KCNA6P17658 529 aa20.43■□□□□ 0.86
HERPUD1-218ENST00000569569 TBX22Q9Y458 520 aa20.43■□□□□ 0.86
HERPUD1-218ENST00000569569 CCDC144AA2RUR9 1427 aa20.43■□□□□ 0.86
HERPUD1-218ENST00000569569 NEXMIFQ5QGS0 1516 aa20.42■□□□□ 0.86
HERPUD1-218ENST00000569569 LRRC7Q96NW7 1537 aa20.42■□□□□ 0.86
HERPUD1-218ENST00000569569 DIP2AQ14689 1571 aa20.4■□□□□ 0.86
HERPUD1-218ENST00000569569 XIRP1Q702N8 1843 aaKnown RBP20.39■□□□□ 0.86
HERPUD1-218ENST00000569569 ADAMTS13Q76LX8 1427 aa20.39■□□□□ 0.85
HERPUD1-218ENST00000569569 RPGRIP1LQ68CZ1 1315 aa20.39■□□□□ 0.85
HERPUD1-218ENST00000569569 UBAP1LF5GYI3 381 aa20.39■□□□□ 0.85
HERPUD1-218ENST00000569569 PPLO60437 1756 aa20.38■□□□□ 0.85
HERPUD1-218ENST00000569569 VGFO15240 615 aaPredicted RBP20.37■□□□□ 0.85
HERPUD1-218ENST00000569569 NWD1Q149M9 1564 aa20.37■□□□□ 0.85
HERPUD1-218ENST00000569569 NRXN3Q9Y4C0 1643 aa20.36■□□□□ 0.85
HERPUD1-218ENST00000569569 TOM1O60784 492 aa20.36■□□□□ 0.85
HERPUD1-218ENST00000569569 SETBP1Q9Y6X0 1596 aa20.36■□□□□ 0.85
HERPUD1-218ENST00000569569 PIK3R4Q99570 1358 aa20.35■□□□□ 0.85
HERPUD1-218ENST00000569569 PROSER2Q86WR7 435 aaPredicted RBP20.34■□□□□ 0.85
HERPUD1-218ENST00000569569 NKTRP30414 1462 aaKnown RBP20.34■□□□□ 0.85
HERPUD1-218ENST00000569569 RGL3Q3MIN7 710 aa20.33■□□□□ 0.85
HERPUD1-218ENST00000569569 SPATA31E1Q6ZUB1 1445 aa20.33■□□□□ 0.84
HERPUD1-218ENST00000569569 IFT172Q9UG01 1749 aa20.31■□□□□ 0.84
HERPUD1-218ENST00000569569 ANKRD30BQ9BXX2 1392 aa20.31■□□□□ 0.84
HERPUD1-218ENST00000569569 TMEM94Q12767 1356 aa20.3■□□□□ 0.84
HERPUD1-218ENST00000569569 AMOTL2Q9Y2J4 779 aa20.28■□□□□ 0.84
HERPUD1-218ENST00000569569 PTPRUQ92729 1446 aa20.27■□□□□ 0.83
HERPUD1-218ENST00000569569 PIP4K2BP78356 416 aa20.26■□□□□ 0.83
HERPUD1-218ENST00000569569 RBM33Q96EV2 1170 aaKnown RBP20.26■□□□□ 0.83
HERPUD1-218ENST00000569569 SETD1AO15047 1707 aaKnown RBP20.26■□□□□ 0.83
HERPUD1-218ENST00000569569 ALKQ9UM73 1620 aa20.26■□□□□ 0.83
HERPUD1-218ENST00000569569 METP08581 1390 aa20.25■□□□□ 0.83
HERPUD1-218ENST00000569569 TRIM26Q12899 539 aaPredicted RBP20.25■□□□□ 0.83
HERPUD1-218ENST00000569569 SCAF1Q9H7N4 1312 aaKnown RBP20.25■□□□□ 0.83
HERPUD1-218ENST00000569569 NCOA3Q9Y6Q9 1424 aa20.24■□□□□ 0.83
HERPUD1-218ENST00000569569 XRN1Q8IZH2 1706 aaKnown RBP20.24■□□□□ 0.83
HERPUD1-218ENST00000569569 ADGRF5Q8IZF2 1346 aa20.24■□□□□ 0.83
HERPUD1-218ENST00000569569 MSH6P52701 1360 aa20.21■□□□□ 0.83
HERPUD1-218ENST00000569569 C14orf37Q86TY3 774 aa20.18■□□□□ 0.82
HERPUD1-218ENST00000569569 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.17■□□□□ 0.82
HERPUD1-218ENST00000569569 C19orf44Q9H6X5 657 aa20.16■□□□□ 0.82
HERPUD1-218ENST00000569569 PIK3C2GO75747 1445 aa20.16■□□□□ 0.82
HERPUD1-218ENST00000569569 MYOM2P54296 1465 aa20.16■□□□□ 0.82
HERPUD1-218ENST00000569569 NRXN1Q9ULB1 1477 aa20.14■□□□□ 0.81
HERPUD1-218ENST00000569569 STAC3Q96MF2 364 aa20.14■□□□□ 0.81
HERPUD1-218ENST00000569569 HSPA1LP34931 641 aa20.13■□□□□ 0.81
HERPUD1-218ENST00000569569 CADPS2Q86UW7 1296 aa20.13■□□□□ 0.81
HERPUD1-218ENST00000569569 FAM135BQ49AJ0 1406 aa20.12■□□□□ 0.81
HERPUD1-218ENST00000569569 DCAF11Q8TEB1 546 aa20.12■□□□□ 0.81
HERPUD1-218ENST00000569569 C14orf93Q9H972 538 aaKnown RBP20.12■□□□□ 0.81
HERPUD1-218ENST00000569569 SLAIN2Q9P270 581 aa20.12■□□□□ 0.81
HERPUD1-218ENST00000569569 PTCH1Q13635 1447 aa20.11■□□□□ 0.81
HERPUD1-218ENST00000569569 PRAG1Q86YV5 1406 aa20.11■□□□□ 0.81
HERPUD1-218ENST00000569569 ATF3P18847 181 aa20.11■□□□□ 0.81
HERPUD1-218ENST00000569569 KDM2AQ9Y2K7 1162 aa20.11■□□□□ 0.81
HERPUD1-218ENST00000569569 LAMC1P11047 1609 aa20.11■□□□□ 0.81
HERPUD1-218ENST00000569569 ROBO1Q9Y6N7 1651 aa20.1■□□□□ 0.81
HERPUD1-218ENST00000569569 CFAP70Q5T0N1 1121 aa20.09■□□□□ 0.81
HERPUD1-218ENST00000569569 TMEM132EQ6IEE7 984 aa20.09■□□□□ 0.81
HERPUD1-218ENST00000569569 ROBO2Q9HCK4 1378 aa20.08■□□□□ 0.81
HERPUD1-218ENST00000569569 DCCP43146 1447 aa20.08■□□□□ 0.8
HERPUD1-218ENST00000569569 LRPPRCP42704 1394 aaKnown RBP20.08■□□□□ 0.8
HERPUD1-218ENST00000569569 DHX57Q6P158 1386 aaKnown RBP20.08■□□□□ 0.8
HERPUD1-218ENST00000569569 KNDC1Q76NI1 1749 aa20.07■□□□□ 0.8
HERPUD1-218ENST00000569569 NALCNQ8IZF0 1738 aa20.07■□□□□ 0.8
HERPUD1-218ENST00000569569 ASXL1Q8IXJ9 1541 aa20.07■□□□□ 0.8
HERPUD1-218ENST00000569569 MSH5O43196 834 aa20.07■□□□□ 0.8
HERPUD1-218ENST00000569569 ADGRL3Q9HAR2 1447 aa20.07■□□□□ 0.8
HERPUD1-218ENST00000569569 ABCC11Q96J66 1382 aa20.07■□□□□ 0.8
HERPUD1-218ENST00000569569 STK26Q9P289 416 aa20.06■□□□□ 0.8
HERPUD1-218ENST00000569569 TECPR2O15040 1411 aa20.05■□□□□ 0.8
HERPUD1-218ENST00000569569 YTHDC2Q9H6S0 1430 aaKnown RBP20.05■□□□□ 0.8
HERPUD1-218ENST00000569569 SIRT1Q96EB6 747 aa20.02■□□□□ 0.8
HERPUD1-218ENST00000569569 SIN3AQ96ST3 1273 aa20.02■□□□□ 0.8
HERPUD1-218ENST00000569569 WAPLQ7Z5K2 1190 aa20■□□□□ 0.79
HERPUD1-218ENST00000569569 MST1RQ04912 1400 aa20■□□□□ 0.79
HERPUD1-218ENST00000569569 PHLPP1O60346 1717 aa19.99■□□□□ 0.79
HERPUD1-218ENST00000569569 NEUROD1Q13562 356 aa19.98■□□□□ 0.79
HERPUD1-218ENST00000569569 ADGRB1O14514 1584 aa19.98■□□□□ 0.79
HERPUD1-218ENST00000569569 KIAA1210Q9ULL0 1709 aa19.96■□□□□ 0.79
HERPUD1-218ENST00000569569 BRINP3Q76B58 766 aa19.96■□□□□ 0.79
HERPUD1-218ENST00000569569 PLEKHH1Q9ULM0 1364 aa19.95■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms