RNA–Protein interactions for RNA: ENST00000568454.5

TSC2-222, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-222ENST00000568454 CCDC18Q5T9S5 1454 aa20.23■□□□□ 0.83
TSC2-222ENST00000568454 APAF1O14727 1248 aa20.23■□□□□ 0.83
TSC2-222ENST00000568454 ANKRD20A12PQ8NF67 263 aa20.23■□□□□ 0.83
TSC2-222ENST00000568454 API5Q9BZZ5 524 aaKnown RBP20.22■□□□□ 0.83
TSC2-222ENST00000568454 INTS3Q68E01 1043 aaKnown RBP20.22■□□□□ 0.83
TSC2-222ENST00000568454 IFT57Q9NWB7 429 aa20.21■□□□□ 0.83
TSC2-222ENST00000568454 ROCK1Q13464 1354 aa20.21■□□□□ 0.83
TSC2-222ENST00000568454 CCDC144AA2RUR9 1427 aa20.21■□□□□ 0.83
TSC2-222ENST00000568454 MLECQ14165 292 aa20.21■□□□□ 0.83
TSC2-222ENST00000568454 SASS6Q6UVJ0 657 aa20.21■□□□□ 0.83
TSC2-222ENST00000568454 MNS1Q8NEH6 495 aa20.21■□□□□ 0.83
TSC2-222ENST00000568454 AKAP17AQ02040 695 aaKnown RBP20.2■□□□□ 0.83
TSC2-222ENST00000568454 LRRFIP1Q32MZ4 808 aaKnown RBP20.2■□□□□ 0.82
TSC2-222ENST00000568454 MARCH6O60337 910 aa20.2■□□□□ 0.82
TSC2-222ENST00000568454 HOOK1Q9UJC3 728 aaKnown RBP20.2■□□□□ 0.82
TSC2-222ENST00000568454 CADPSQ9ULU8 1353 aa20.19■□□□□ 0.82
TSC2-222ENST00000568454 ELL2O00472 640 aaPredicted RBP20.19■□□□□ 0.82
TSC2-222ENST00000568454 AMPHP49418 695 aa20.19■□□□□ 0.82
TSC2-222ENST00000568454 SMC3Q9UQE7 1217 aa20.18■□□□□ 0.82
TSC2-222ENST00000568454 ANO2Q9NQ90 1003 aa20.18■□□□□ 0.82
TSC2-222ENST00000568454 SYNE3Q6ZMZ3 975 aa20.18■□□□□ 0.82
TSC2-222ENST00000568454 CCDC66A2RUB6 948 aa20.17■□□□□ 0.82
TSC2-222ENST00000568454 RNF20Q5VTR2 975 aa20.17■□□□□ 0.82
TSC2-222ENST00000568454 SMARCA4P51532 1647 aa20.17■□□□□ 0.82
TSC2-222ENST00000568454 TRIM29Q14134 588 aa20.17■□□□□ 0.82
TSC2-222ENST00000568454 TDRD9Q8NDG6 1382 aaKnown RBP20.17■□□□□ 0.82
TSC2-222ENST00000568454 TRAK2O60296 914 aa20.17■□□□□ 0.82
TSC2-222ENST00000568454 HSP90B2PQ58FF3 399 aa20.17■□□□□ 0.82
TSC2-222ENST00000568454 UACAQ9BZF9 1416 aa20.17■□□□□ 0.82
TSC2-222ENST00000568454 ATAD2BQ9ULI0 1458 aa20.16■□□□□ 0.82
TSC2-222ENST00000568454 KIF3BO15066 747 aa20.16■□□□□ 0.82
TSC2-222ENST00000568454 AK7Q96M32 723 aa20.16■□□□□ 0.82
TSC2-222ENST00000568454 CDR1P51861 262 aa20.15■□□□□ 0.82
TSC2-222ENST00000568454 FHOD3Q2V2M9 1422 aa20.15■□□□□ 0.82
TSC2-222ENST00000568454 HMGN5P82970 282 aaKnown RBP20.15■□□□□ 0.82
TSC2-222ENST00000568454 CCDC47Q96A33 483 aaKnown RBP20.15■□□□□ 0.82
TSC2-222ENST00000568454 CWC15Q9P013 229 aaKnown RBP20.15■□□□□ 0.82
TSC2-222ENST00000568454 VPS37CA5D8V6 355 aaPredicted RBP20.15■□□□□ 0.82
TSC2-222ENST00000568454 CCDC73Q6ZRK6 1079 aa20.15■□□□□ 0.82
TSC2-222ENST00000568454 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.14■□□□□ 0.82
TSC2-222ENST00000568454 PKNOX2Q96KN3 472 aa20.14■□□□□ 0.82
TSC2-222ENST00000568454 CALRP27797 417 aaKnown RBP20.14■□□□□ 0.81
TSC2-222ENST00000568454 RUFY1Q96T51 708 aa20.14■□□□□ 0.81
TSC2-222ENST00000568454 BRPF3Q9ULD4 1205 aa20.14■□□□□ 0.81
TSC2-222ENST00000568454 MBD3O95983 291 aa20.13■□□□□ 0.81
TSC2-222ENST00000568454 CNTLNQ9NXG0 1405 aa20.13■□□□□ 0.81
TSC2-222ENST00000568454 CCDC173Q0VFZ6 552 aa20.13■□□□□ 0.81
TSC2-222ENST00000568454 TRAK1Q9UPV9 953 aa20.13■□□□□ 0.81
TSC2-222ENST00000568454 CCDC7Q96M83 1385 aa20.13■□□□□ 0.81
TSC2-222ENST00000568454 CPLX1O14810 134 aa20.12■□□□□ 0.81
TSC2-222ENST00000568454 LETM1O95202 739 aaPredicted RBP20.12■□□□□ 0.81
TSC2-222ENST00000568454 HNRNPMP52272 730 aaKnown RBP eCLIP20.12■□□□□ 0.811e-7■■■■□ 25.8
TSC2-222ENST00000568454 PCMTD1Q96MG8 357 aaPredicted RBP20.12■□□□□ 0.81
TSC2-222ENST00000568454 PATL2C9JE40 543 aaKnown RBP20.12■□□□□ 0.81
TSC2-222ENST00000568454 CDC45O75419 566 aa20.12■□□□□ 0.81
TSC2-222ENST00000568454 NGDNQ8NEJ9 315 aaKnown RBP20.11■□□□□ 0.81
TSC2-222ENST00000568454 TMX4Q9H1E5 349 aaPredicted RBP20.1■□□□□ 0.81
TSC2-222ENST00000568454 EVC2Q86UK5 1308 aa20.1■□□□□ 0.81
TSC2-222ENST00000568454 IFIT2P09913 472 aaKnown RBP20.1■□□□□ 0.81
TSC2-222ENST00000568454 RUNDC1Q96C34 613 aa20.1■□□□□ 0.81
TSC2-222ENST00000568454 NAT10Q9H0A0 1025 aaKnown RBP20.1■□□□□ 0.81
TSC2-222ENST00000568454 LNPKQ9C0E8 428 aa20.09■□□□□ 0.81
TSC2-222ENST00000568454 COG3Q96JB2 828 aa20.07■□□□□ 0.8
TSC2-222ENST00000568454 FRAT2O75474 233 aaPredicted RBP20.07■□□□□ 0.8
TSC2-222ENST00000568454 ERCC4Q92889 916 aaPredicted RBP20.07■□□□□ 0.8
TSC2-222ENST00000568454 NEXNQ0ZGT2 675 aa20.06■□□□□ 0.8
TSC2-222ENST00000568454 IL27Q8NEV9 243 aa20.06■□□□□ 0.8
TSC2-222ENST00000568454 PRM3Q9NNZ6 103 aa20.06■□□□□ 0.8
TSC2-222ENST00000568454 VPS53Q5VIR6 699 aa20.06■□□□□ 0.8
TSC2-222ENST00000568454 BRD4O60885 1362 aaPredicted RBP20.06■□□□□ 0.8
TSC2-222ENST00000568454 DIAPH1O60610 1272 aaKnown RBP20.06■□□□□ 0.8
TSC2-222ENST00000568454 HSP90AB4PQ58FF6 505 aa20.06■□□□□ 0.8
TSC2-222ENST00000568454 RNF214Q8ND24 703 aa20.06■□□□□ 0.8
TSC2-222ENST00000568454 KIF7Q2M1P5 1343 aa20.05■□□□□ 0.8
TSC2-222ENST00000568454 ANO8Q9HCE9 1232 aaPredicted RBP20.05■□□□□ 0.8
TSC2-222ENST00000568454 RIPK4P57078 832 aa20.05■□□□□ 0.8
TSC2-222ENST00000568454 C9orf78Q9NZ63 289 aaPredicted RBP20.05■□□□□ 0.8
TSC2-222ENST00000568454 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.05■□□□□ 0.8
TSC2-222ENST00000568454 CAVIN1Q6NZI2 390 aaKnown RBP20.05■□□□□ 0.8
TSC2-222ENST00000568454 RRP12Q5JTH9 1297 aaKnown RBP20.05■□□□□ 0.8
TSC2-222ENST00000568454 TSPY26PQ9H489 355 aa20.05■□□□□ 0.8
TSC2-222ENST00000568454 LTV1Q96GA3 475 aaPredicted RBP20.04■□□□□ 0.8
TSC2-222ENST00000568454 ERC2O15083 957 aa20.03■□□□□ 0.8
TSC2-222ENST00000568454 TRDNQ13061 729 aa20.03■□□□□ 0.8
TSC2-222ENST00000568454 CCP110O43303 1012 aa20.02■□□□□ 0.8
TSC2-222ENST00000568454 RUSC2Q8N2Y8 1516 aa20.02■□□□□ 0.8
TSC2-222ENST00000568454 MCM2P49736 904 aa20.02■□□□□ 0.8
TSC2-222ENST00000568454 CCDC9Q9Y3X0 531 aaKnown RBP20.02■□□□□ 0.8
TSC2-222ENST00000568454 WASHC2CQ9Y4E1 1318 aa20.02■□□□□ 0.8
TSC2-222ENST00000568454 GNAI1P63096 354 aa20.01■□□□□ 0.79
TSC2-222ENST00000568454 PANK1Q8TE04 598 aa20.01■□□□□ 0.79
TSC2-222ENST00000568454 TEFQ10587 303 aa20.01■□□□□ 0.79
TSC2-222ENST00000568454 OLFM4Q6UX06 510 aa20.01■□□□□ 0.79
TSC2-222ENST00000568454 TRIM5Q9C035 493 aa20.01■□□□□ 0.79
TSC2-222ENST00000568454 H0YHG0 523 aa20■□□□□ 0.79
TSC2-222ENST00000568454 C1orf141Q5JVX7 400 aa20■□□□□ 0.79
TSC2-222ENST00000568454 G3BP1Q13283 466 aaKnown RBP eCLIP20■□□□□ 0.79
TSC2-222ENST00000568454 RABEP1Q15276 862 aa20■□□□□ 0.79
TSC2-222ENST00000568454 DCTN1Q14203 1278 aa19.99■□□□□ 0.79
TSC2-222ENST00000568454 SAFBQ15424 915 aaKnown RBP eCLIP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms