RNA–Protein interactions for RNA: ENST00000567954.5

LYRM1-208, Transcript of LYR motif containing 1, human

APPRIS P1 TSL 1 (best) BASIC

Gene LYRM1, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LYRM1-208	ENST00000567954	PNPLA6	Q8IY17	1366 aa		12.56	□□□□□ -0.4
LYRM1-208	ENST00000567954	EHMT2	Q96KQ7	1210 aa		12.56	□□□□□ -0.4
LYRM1-208	ENST00000567954	PCDH10	Q9P2E7	1040 aa		12.56	□□□□□ -0.4
LYRM1-208	ENST00000567954	TMEM2	Q9UHN6	1383 aa		12.56	□□□□□ -0.4
LYRM1-208	ENST00000567954	BAG6	P46379	1132 aa		12.55	□□□□□ -0.4
LYRM1-208	ENST00000567954	C14orf37	Q86TY3	774 aa		12.55	□□□□□ -0.4
LYRM1-208	ENST00000567954	GJD4	Q96KN9	370 aa	Predicted RBP	12.54	□□□□□ -0.4
LYRM1-208	ENST00000567954	ERVK-7	P63135	1459 aa		12.53	□□□□□ -0.4
LYRM1-208	ENST00000567954	RTEL1-TNFRSF6B	F6WH68	1400 aa		12.53	□□□□□ -0.4
LYRM1-208	ENST00000567954	PLEKHH2	Q8IVE3	1493 aa		12.52	□□□□□ -0.41
LYRM1-208	ENST00000567954	KDM5A	P29375	1690 aa	Known RBP	12.51	□□□□□ -0.41
LYRM1-208	ENST00000567954	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	12.51	□□□□□ -0.41	2e-6	■■□□□ 11.8
LYRM1-208	ENST00000567954	FMN1	Q68DA7	1419 aa		12.5	□□□□□ -0.41
LYRM1-208	ENST00000567954	TET3	O43151	1660 aa		12.5	□□□□□ -0.41
LYRM1-208	ENST00000567954	UBR1	Q8IWV7	1749 aa		12.49	□□□□□ -0.41
LYRM1-208	ENST00000567954	MAST1	Q9Y2H9	1570 aa		12.49	□□□□□ -0.41
LYRM1-208	ENST00000567954	ARHGAP35	Q9NRY4	1499 aa		12.49	□□□□□ -0.41
LYRM1-208	ENST00000567954	NINL	Q9Y2I6	1382 aa		12.49	□□□□□ -0.41
LYRM1-208	ENST00000567954	ADGB	Q8N7X0	1667 aa		12.48	□□□□□ -0.41
LYRM1-208	ENST00000567954	CFDP1	Q9UEE9	299 aa	Predicted RBP	12.48	□□□□□ -0.41
LYRM1-208	ENST00000567954	MROH1	Q8NDA8	1641 aa		12.48	□□□□□ -0.41
LYRM1-208	ENST00000567954	PTCH1	Q13635	1447 aa		12.47	□□□□□ -0.41
LYRM1-208	ENST00000567954	GIGYF1	O75420	1035 aa	Predicted RBP	12.47	□□□□□ -0.41
LYRM1-208	ENST00000567954	CSRNP3	Q8WYN3	585 aa		12.47	□□□□□ -0.41
LYRM1-208	ENST00000567954	PPP1R1B	Q9UD71	204 aa	Predicted RBP	12.47	□□□□□ -0.41
LYRM1-208	ENST00000567954	STAG3	Q9UJ98	1225 aa		12.47	□□□□□ -0.41
LYRM1-208	ENST00000567954	GPATCH8	Q9UKJ3	1502 aa	Known RBP	12.47	□□□□□ -0.41
LYRM1-208	ENST00000567954	EN1	Q05925	392 aa	Predicted RBP	12.46	□□□□□ -0.41
LYRM1-208	ENST00000567954	BCAN	Q96GW7	911 aa		12.46	□□□□□ -0.41
LYRM1-208	ENST00000567954	UNC13B	O14795	1591 aa		12.46	□□□□□ -0.42
LYRM1-208	ENST00000567954	ASXL1	Q8IXJ9	1541 aa		12.44	□□□□□ -0.42
LYRM1-208	ENST00000567954	DDX17	Q92841	729 aa	Known RBP	12.44	□□□□□ -0.42
LYRM1-208	ENST00000567954	CAMSAP2	Q08AD1	1489 aa		12.44	□□□□□ -0.42
LYRM1-208	ENST00000567954	RALGAPB	Q86X10	1494 aa		12.43	□□□□□ -0.42
LYRM1-208	ENST00000567954	SEPT12	Q8IYM1	358 aa		12.43	□□□□□ -0.42
LYRM1-208	ENST00000567954	PPP1R15A	O75807	674 aa	Predicted RBP	12.42	□□□□□ -0.42
LYRM1-208	ENST00000567954	KRT27	Q7Z3Y8	459 aa		12.41	□□□□□ -0.42
LYRM1-208	ENST00000567954	SPON1	Q9HCB6	807 aa		12.41	□□□□□ -0.42
LYRM1-208	ENST00000567954	CAPN15	O75808	1086 aa		12.39	□□□□□ -0.43
LYRM1-208	ENST00000567954	CDC42BPA	Q5VT25	1732 aa		12.39	□□□□□ -0.43
LYRM1-208	ENST00000567954	MBD5	Q9P267	1494 aa		12.39	□□□□□ -0.43
LYRM1-208	ENST00000567954	PRELP	P51888	382 aa		12.38	□□□□□ -0.43
LYRM1-208	ENST00000567954	TBX22	Q9Y458	520 aa		12.38	□□□□□ -0.43
LYRM1-208	ENST00000567954	ZNF644	Q9H582	1327 aa	Predicted RBP	12.37	□□□□□ -0.43
LYRM1-208	ENST00000567954	DCC	P43146	1447 aa		12.37	□□□□□ -0.43
LYRM1-208	ENST00000567954	KCNQ2	O43526	872 aa		12.37	□□□□□ -0.43
LYRM1-208	ENST00000567954	ONECUT3	O60422	494 aa	Predicted RBP	12.37	□□□□□ -0.43
LYRM1-208	ENST00000567954	UNC5CL	Q8IV45	518 aa		12.37	□□□□□ -0.43
LYRM1-208	ENST00000567954	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	12.37	□□□□□ -0.43
LYRM1-208	ENST00000567954	IDI1	Q13907	227 aa		12.36	□□□□□ -0.43
LYRM1-208	ENST00000567954	EZH2	Q15910	746 aa	Known RBP	12.36	□□□□□ -0.43
LYRM1-208	ENST00000567954	MST1R	Q04912	1400 aa		12.36	□□□□□ -0.43
LYRM1-208	ENST00000567954	EFCAB6	Q5THR3	1501 aa		12.35	□□□□□ -0.43
LYRM1-208	ENST00000567954	DISP2	A7MBM2	1401 aa		12.34	□□□□□ -0.43
LYRM1-208	ENST00000567954	SOS2	Q07890	1332 aa	Predicted RBP	12.34	□□□□□ -0.43
LYRM1-208	ENST00000567954	CCNB3	Q8WWL7	1395 aa		12.33	□□□□□ -0.44
LYRM1-208	ENST00000567954	PLEKHG1	Q9ULL1	1385 aa		12.33	□□□□□ -0.44
LYRM1-208	ENST00000567954	CAMKK2	Q96RR4	588 aa		12.33	□□□□□ -0.44
LYRM1-208	ENST00000567954	ARHGAP31	Q2M1Z3	1444 aa		12.33	□□□□□ -0.44
LYRM1-208	ENST00000567954	SPHKAP	Q2M3C7	1700 aa		12.33	□□□□□ -0.44
LYRM1-208	ENST00000567954	GLI3	P10071	1580 aa		12.31	□□□□□ -0.44
LYRM1-208	ENST00000567954	RSPH4A	Q5TD94	716 aa		12.31	□□□□□ -0.44
LYRM1-208	ENST00000567954	CCDC18	Q5T9S5	1454 aa		12.31	□□□□□ -0.44
LYRM1-208	ENST00000567954	HSPA6	P17066	643 aa		12.3	□□□□□ -0.44
LYRM1-208	ENST00000567954	HDGF	P51858	240 aa	Known RBP	12.29	□□□□□ -0.44
LYRM1-208	ENST00000567954	PIK3C2B	O00750	1634 aa		12.29	□□□□□ -0.44
LYRM1-208	ENST00000567954	PIK3R4	Q99570	1358 aa		12.29	□□□□□ -0.44
LYRM1-208	ENST00000567954	MYOM2	P54296	1465 aa		12.28	□□□□□ -0.44
LYRM1-208	ENST00000567954	CHD2	O14647	1828 aa	Known RBP	12.28	□□□□□ -0.44
LYRM1-208	ENST00000567954	VPS72	Q15906	364 aa		12.28	□□□□□ -0.44
LYRM1-208	ENST00000567954	NBPF8	Q3BBV2	869 aa		12.28	□□□□□ -0.44
LYRM1-208	ENST00000567954	COL13A1	Q5TAT6	717 aa	Predicted RBP	12.28	□□□□□ -0.44
LYRM1-208	ENST00000567954	NBPF14	Q5TI25	921 aa		12.28	□□□□□ -0.44
LYRM1-208	ENST00000567954	AMOTL2	Q9Y2J4	779 aa		12.28	□□□□□ -0.44
LYRM1-208	ENST00000567954	CAMTA1	Q9Y6Y1	1673 aa		12.28	□□□□□ -0.44
LYRM1-208	ENST00000567954	MTUS2	Q5JR59	1369 aa		12.28	□□□□□ -0.44
LYRM1-208	ENST00000567954	SLIT2	O94813	1529 aa		12.27	□□□□□ -0.45
LYRM1-208	ENST00000567954	FAM83G	A6ND36	823 aa		12.26	□□□□□ -0.45
LYRM1-208	ENST00000567954	PARD3	Q8TEW0	1356 aa		12.26	□□□□□ -0.45
LYRM1-208	ENST00000567954	TNS4	Q8IZW8	715 aa		12.24	□□□□□ -0.45
LYRM1-208	ENST00000567954	CCDC141	Q6ZP82	1450 aa		12.23	□□□□□ -0.45
LYRM1-208	ENST00000567954	ZFYVE9	O95405	1425 aa		12.23	□□□□□ -0.45
LYRM1-208	ENST00000567954	TSPY4	P0CV99	314 aa		12.23	□□□□□ -0.45
LYRM1-208	ENST00000567954	TSPY10	P0CW01	314 aa		12.23	□□□□□ -0.45
LYRM1-208	ENST00000567954		A0A0G2JS52	829 aa		12.22	□□□□□ -0.45
LYRM1-208	ENST00000567954	MYT1	Q01538	1121 aa		12.22	□□□□□ -0.45
LYRM1-208	ENST00000567954	SYT17	Q9BSW7	474 aa		12.22	□□□□□ -0.45
LYRM1-208	ENST00000567954	SLC52A1	Q9NWF4	448 aa		12.22	□□□□□ -0.45
LYRM1-208	ENST00000567954	CCDC9	Q9Y3X0	531 aa	Known RBP	12.22	□□□□□ -0.45
LYRM1-208	ENST00000567954	ADAMTS13	Q76LX8	1427 aa		12.21	□□□□□ -0.45
LYRM1-208	ENST00000567954	CASKIN1	Q8WXD9	1431 aa		12.21	□□□□□ -0.45
LYRM1-208	ENST00000567954	BRWD3	Q6RI45	1802 aa		12.21	□□□□□ -0.45
LYRM1-208	ENST00000567954	LRRIQ1	Q96JM4	1722 aa		12.21	□□□□□ -0.45
LYRM1-208	ENST00000567954	C1orf167	Q5SNV9	1468 aa		12.21	□□□□□ -0.46
LYRM1-208	ENST00000567954	FAM182B	Q5T319	152 aa		12.2	□□□□□ -0.46
LYRM1-208	ENST00000567954	ORAI2	Q96SN7	254 aa		12.2	□□□□□ -0.46
LYRM1-208	ENST00000567954	ADGRB3	O60242	1522 aa		12.2	□□□□□ -0.46
LYRM1-208	ENST00000567954	RPRD2	Q5VT52	1461 aa	Known RBP	12.2	□□□□□ -0.46
LYRM1-208	ENST00000567954	APBA3	O96018	575 aa		12.19	□□□□□ -0.46
LYRM1-208	ENST00000567954	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	12.19	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms