RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 XIRP1Q702N8 1843 aaKnown RBP37.87■■■■□ 3.65
FANCA-228ENST00000567943 PLEKHG1Q9ULL1 1385 aa37.85■■■■□ 3.65
FANCA-228ENST00000567943 TRIM52Q96A61 297 aa37.84■■■■□ 3.65
FANCA-228ENST00000567943 SENP3Q9H4L4 574 aaPredicted RBP37.84■■■■□ 3.65
FANCA-228ENST00000567943 CLTCL1P53675 1640 aa37.83■■■■□ 3.65
FANCA-228ENST00000567943 TRPM2O94759 1503 aa37.82■■■■□ 3.65
FANCA-228ENST00000567943 NUTM2DQ5VT03 806 aaPredicted RBP37.8■■■■□ 3.64
FANCA-228ENST00000567943 HDGFP51858 240 aaKnown RBP37.78■■■■□ 3.64
FANCA-228ENST00000567943 PPP1R15AO75807 674 aaPredicted RBP37.77■■■■□ 3.64
FANCA-228ENST00000567943 KCNA6P17658 529 aa37.76■■■■□ 3.64
FANCA-228ENST00000567943 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.76■■■■□ 3.64
FANCA-228ENST00000567943 NWD1Q149M9 1564 aa37.76■■■■□ 3.63
FANCA-228ENST00000567943 TOM1O60784 492 aa37.75■■■■□ 3.63
FANCA-228ENST00000567943 BCANQ96GW7 911 aa37.74■■■■□ 3.63
FANCA-228ENST00000567943 SLC4A1APQ9BWU0 796 aaKnown RBP37.74■■■■□ 3.63
FANCA-228ENST00000567943 CHD2O14647 1828 aaKnown RBP37.73■■■■□ 3.63
FANCA-228ENST00000567943 ADAMTS13Q76LX8 1427 aa37.72■■■■□ 3.63
FANCA-228ENST00000567943 PIP4K2BP78356 416 aa37.71■■■■□ 3.63
FANCA-228ENST00000567943 KIF1BO60333 1816 aa37.69■■■■□ 3.62
FANCA-228ENST00000567943 TBX22Q9Y458 520 aa37.67■■■■□ 3.62
FANCA-228ENST00000567943 TMEM94Q12767 1356 aa37.66■■■■□ 3.62
FANCA-228ENST00000567943 NRXN3Q9Y4C0 1643 aa37.65■■■■□ 3.62
FANCA-228ENST00000567943 NKTRP30414 1462 aaKnown RBP37.64■■■■□ 3.62
FANCA-228ENST00000567943 SCAF1Q9H7N4 1312 aaKnown RBP37.64■■■■□ 3.62
FANCA-228ENST00000567943 FOXD1Q16676 465 aa37.64■■■■□ 3.62
FANCA-228ENST00000567943 NEXMIFQ5QGS0 1516 aa37.63■■■■□ 3.61
FANCA-228ENST00000567943 DIP2AQ14689 1571 aa37.63■■■■□ 3.61
FANCA-228ENST00000567943 RBM33Q96EV2 1170 aaKnown RBP37.62■■■■□ 3.61
FANCA-228ENST00000567943 ZNF326Q5BKZ1 582 aaKnown RBP37.61■■■■□ 3.61
FANCA-228ENST00000567943 SETD5Q9C0A6 1442 aa37.61■■■■□ 3.61
FANCA-228ENST00000567943 PROSER2Q86WR7 435 aaPredicted RBP37.59■■■■□ 3.61
FANCA-228ENST00000567943 HSPA1LP34931 641 aa37.58■■■■□ 3.61
FANCA-228ENST00000567943 MPHOSPH9Q99550 1183 aa37.58■■■■□ 3.61
FANCA-228ENST00000567943 SETBP1Q9Y6X0 1596 aa37.58■■■■□ 3.61
FANCA-228ENST00000567943 PIK3R4Q99570 1358 aa37.53■■■■□ 3.6
FANCA-228ENST00000567943 PTPRUQ92729 1446 aa37.52■■■■□ 3.6
FANCA-228ENST00000567943 RAB3GAP2Q9H2M9 1393 aa37.49■■■■□ 3.59
FANCA-228ENST00000567943 PPLO60437 1756 aa37.45■■■■□ 3.58
FANCA-228ENST00000567943 XRN1Q8IZH2 1706 aaKnown RBP37.43■■■■□ 3.58
FANCA-228ENST00000567943 METP08581 1390 aa37.42■■■■□ 3.58
FANCA-228ENST00000567943 AMOTL2Q9Y2J4 779 aa37.42■■■■□ 3.58
FANCA-228ENST00000567943 ACIN1Q9UKV3 1341 aaKnown RBP37.4■■■■□ 3.58
FANCA-228ENST00000567943 CCDC144AA2RUR9 1427 aa37.4■■■■□ 3.58
FANCA-228ENST00000567943 SETD1AO15047 1707 aaKnown RBP37.39■■■■□ 3.58
FANCA-228ENST00000567943 RPGRIP1LQ68CZ1 1315 aa37.38■■■■□ 3.58
FANCA-228ENST00000567943 SPATA31E1Q6ZUB1 1445 aa37.38■■■■□ 3.57
FANCA-228ENST00000567943 MSH6P52701 1360 aa37.38■■■■□ 3.57
FANCA-228ENST00000567943 NCOA3Q9Y6Q9 1424 aa37.37■■■■□ 3.57
FANCA-228ENST00000567943 FAM135BQ49AJ0 1406 aa37.36■■■■□ 3.57
FANCA-228ENST00000567943 DISP3Q9P2K9 1392 aa37.36■■■■□ 3.57
FANCA-228ENST00000567943 VGFO15240 615 aaPredicted RBP37.35■■■■□ 3.57
FANCA-228ENST00000567943 ROBO1Q9Y6N7 1651 aa37.34■■■■□ 3.57
FANCA-228ENST00000567943 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.33■■■■□ 3.57
FANCA-228ENST00000567943 IFT172Q9UG01 1749 aa37.31■■■■□ 3.56
FANCA-228ENST00000567943 RGL3Q3MIN7 710 aa37.27■■■■□ 3.56
FANCA-228ENST00000567943 SLAIN2Q9P270 581 aa37.26■■■■□ 3.56
FANCA-228ENST00000567943 C14orf37Q86TY3 774 aa37.24■■■■□ 3.55
FANCA-228ENST00000567943 C19orf44Q9H6X5 657 aa37.24■■■■□ 3.55
FANCA-228ENST00000567943 ADGRF5Q8IZF2 1346 aa37.23■■■■□ 3.55
FANCA-228ENST00000567943 HRCP23327 699 aa37.22■■■■□ 3.55
FANCA-228ENST00000567943 MED1Q15648 1581 aaPredicted RBP37.21■■■■□ 3.55
FANCA-228ENST00000567943 ANKRD30BQ9BXX2 1392 aa37.17■■■■□ 3.54
FANCA-228ENST00000567943 ILDR2Q71H61 639 aa37.16■■■■□ 3.54
FANCA-228ENST00000567943 CADPS2Q86UW7 1296 aa37.15■■■■□ 3.54
FANCA-228ENST00000567943 NALCNQ8IZF0 1738 aa37.14■■■■□ 3.54
FANCA-228ENST00000567943 PRAG1Q86YV5 1406 aa37.13■■■■□ 3.53
FANCA-228ENST00000567943 ATF3P18847 181 aa37.13■■■■□ 3.53
FANCA-228ENST00000567943 DCCP43146 1447 aa37.12■■■■□ 3.53
FANCA-228ENST00000567943 PTCH1Q13635 1447 aa37.12■■■■□ 3.53
FANCA-228ENST00000567943 ROBO2Q9HCK4 1378 aa37.12■■■■□ 3.53
FANCA-228ENST00000567943 PIK3C2GO75747 1445 aa37.1■■■■□ 3.53
FANCA-228ENST00000567943 ADGRL3Q9HAR2 1447 aa37.1■■■■□ 3.53
FANCA-228ENST00000567943 PHLPP1O60346 1717 aa37.09■■■■□ 3.53
FANCA-228ENST00000567943 ASXL1Q8IXJ9 1541 aa37.07■■■■□ 3.53
FANCA-228ENST00000567943 MST1RQ04912 1400 aa37.04■■■■□ 3.52
FANCA-228ENST00000567943 NRXN1Q9ULB1 1477 aa37.04■■■■□ 3.52
FANCA-228ENST00000567943 COL16A1Q07092 1604 aaPredicted RBP37.03■■■■□ 3.52
FANCA-228ENST00000567943 MYOM2P54296 1465 aa37.01■■■■□ 3.51
FANCA-228ENST00000567943 BRINP3Q76B58 766 aa36.99■■■■□ 3.51
FANCA-228ENST00000567943 AHDC1Q5TGY3 1603 aaPredicted RBP36.99■■■■□ 3.51
FANCA-228ENST00000567943 TMEM132EQ6IEE7 984 aa36.97■■■■□ 3.51
FANCA-228ENST00000567943 TECPR2O15040 1411 aa36.95■■■■□ 3.51
FANCA-228ENST00000567943 LRPPRCP42704 1394 aaKnown RBP36.94■■■■□ 3.5
FANCA-228ENST00000567943 KNDC1Q76NI1 1749 aa36.94■■■■□ 3.5
FANCA-228ENST00000567943 C14orf93Q9H972 538 aaKnown RBP36.94■■■■□ 3.5
FANCA-228ENST00000567943 STK26Q9P289 416 aa36.92■■■■□ 3.5
FANCA-228ENST00000567943 ABCC11Q96J66 1382 aa36.91■■■■□ 3.5
FANCA-228ENST00000567943 LAMC1P11047 1609 aa36.89■■■■□ 3.5
FANCA-228ENST00000567943 NHSL1Q5SYE7 1610 aa36.89■■■■□ 3.5
FANCA-228ENST00000567943 CFAP70Q5T0N1 1121 aa36.89■■■■□ 3.5
FANCA-228ENST00000567943 YTHDC2Q9H6S0 1430 aaKnown RBP36.88■■■■□ 3.49
FANCA-228ENST00000567943 JCADQ9P266 1359 aa36.87■■■■□ 3.49
FANCA-228ENST00000567943 C1orf167Q5SNV9 1468 aa36.87■■■■□ 3.49
FANCA-228ENST00000567943 WAPLQ7Z5K2 1190 aa36.86■■■■□ 3.49
FANCA-228ENST00000567943 PLEKHH1Q9ULM0 1364 aa36.85■■■■□ 3.49
FANCA-228ENST00000567943 DHX57Q6P158 1386 aaKnown RBP36.83■■■■□ 3.49
FANCA-228ENST00000567943 PHF23Q9BUL5 403 aaPredicted RBP36.82■■■■□ 3.48
FANCA-228ENST00000567943 CDC42BPGQ6DT37 1551 aa36.82■■■■□ 3.48
FANCA-228ENST00000567943 RGS17Q9UGC6 210 aaPredicted RBP36.81■■■■□ 3.48
FANCA-228ENST00000567943 DDX17Q92841 729 aaKnown RBP36.8■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms