RNA–Protein interactions for RNA: ENST00000567138.2

SPG7-216, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-216ENST00000567138 NOS1P29475 1434 aa17.69■□□□□ 0.42
SPG7-216ENST00000567138 CHIC2Q9UKJ5 165 aa17.68■□□□□ 0.42
SPG7-216ENST00000567138 ANKRD30AQ9BXX3 1397 aa17.67■□□□□ 0.42
SPG7-216ENST00000567138 MSH6P52701 1360 aa17.65■□□□□ 0.42
SPG7-216ENST00000567138 COL16A1Q07092 1604 aaPredicted RBP17.65■□□□□ 0.42
SPG7-216ENST00000567138 BCANQ96GW7 911 aa17.65■□□□□ 0.42
SPG7-216ENST00000567138 TMEM131LA2VDJ0 1609 aa17.63■□□□□ 0.41
SPG7-216ENST00000567138 ZFYVE9O95405 1425 aa17.62■□□□□ 0.41
SPG7-216ENST00000567138 ADGRL2O95490 1459 aa17.62■□□□□ 0.41
SPG7-216ENST00000567138 JCADQ9P266 1359 aa17.6■□□□□ 0.41
SPG7-216ENST00000567138 APLP2Q06481 763 aa17.6■□□□□ 0.41
SPG7-216ENST00000567138 RIMS2Q9UQ26 1411 aa17.6■□□□□ 0.41
SPG7-216ENST00000567138 RPRD2Q5VT52 1461 aaKnown RBP17.59■□□□□ 0.41
SPG7-216ENST00000567138 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.59■□□□□ 0.41
SPG7-216ENST00000567138 PLEKHG1Q9ULL1 1385 aa17.59■□□□□ 0.41
SPG7-216ENST00000567138 LRP6O75581 1613 aa17.58■□□□□ 0.41
SPG7-216ENST00000567138 SLC52A1Q9NWF4 448 aa17.58■□□□□ 0.4
SPG7-216ENST00000567138 SLAIN2Q9P270 581 aa17.58■□□□□ 0.4
SPG7-216ENST00000567138 E9PCH4 1651 aa17.58■□□□□ 0.4
SPG7-216ENST00000567138 SHPRHQ149N8 1683 aa17.58■□□□□ 0.4
SPG7-216ENST00000567138 PPP1R15AO75807 674 aaPredicted RBP17.57■□□□□ 0.4
SPG7-216ENST00000567138 UNC13BO14795 1591 aa17.57■□□□□ 0.4
SPG7-216ENST00000567138 AHDC1Q5TGY3 1603 aaPredicted RBP17.55■□□□□ 0.4
SPG7-216ENST00000567138 ANKRD50Q9ULJ7 1429 aa17.55■□□□□ 0.4
SPG7-216ENST00000567138 DIP2AQ14689 1571 aa17.54■□□□□ 0.4
SPG7-216ENST00000567138 CHGAP10645 457 aaKnown RBP17.52■□□□□ 0.39
SPG7-216ENST00000567138 FAM50AQ14320 339 aaKnown RBP17.52■□□□□ 0.39
SPG7-216ENST00000567138 C14orf37Q86TY3 774 aa17.52■□□□□ 0.39
SPG7-216ENST00000567138 ADAMTS13Q76LX8 1427 aa17.51■□□□□ 0.39
SPG7-216ENST00000567138 NUTM2DQ5VT03 806 aaPredicted RBP17.51■□□□□ 0.39
SPG7-216ENST00000567138 MEX3CQ5U5Q3 659 aaKnown RBP17.5■□□□□ 0.39
SPG7-216ENST00000567138 NCOA3Q9Y6Q9 1424 aa17.5■□□□□ 0.39
SPG7-216ENST00000567138 IQGAP3Q86VI3 1631 aa17.49■□□□□ 0.39
SPG7-216ENST00000567138 TRPM2O94759 1503 aa17.49■□□□□ 0.39
SPG7-216ENST00000567138 SPATA31A6Q5VVP1 1343 aa17.49■□□□□ 0.39
SPG7-216ENST00000567138 TBX22Q9Y458 520 aa17.49■□□□□ 0.39
SPG7-216ENST00000567138 KCNA4P22459 653 aa17.48■□□□□ 0.39
SPG7-216ENST00000567138 HDGFP51858 240 aaKnown RBP17.48■□□□□ 0.39
SPG7-216ENST00000567138 TRIM52Q96A61 297 aa17.47■□□□□ 0.39
SPG7-216ENST00000567138 XRN1Q8IZH2 1706 aaKnown RBP17.46■□□□□ 0.39
SPG7-216ENST00000567138 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.46■□□□□ 0.39
SPG7-216ENST00000567138 NHSL1Q5SYE7 1610 aa17.45■□□□□ 0.38
SPG7-216ENST00000567138 NRXN3Q9Y4C0 1643 aa17.45■□□□□ 0.38
SPG7-216ENST00000567138 CADPS2Q86UW7 1296 aa17.45■□□□□ 0.38
SPG7-216ENST00000567138 PTPRUQ92729 1446 aa17.45■□□□□ 0.38
SPG7-216ENST00000567138 ATF3P18847 181 aa17.44■□□□□ 0.38
SPG7-216ENST00000567138 ZNF772Q68DY9 489 aaPredicted RBP17.44■□□□□ 0.38
SPG7-216ENST00000567138 PIK3R4Q99570 1358 aa17.44■□□□□ 0.38
SPG7-216ENST00000567138 UPF1Q92900 1129 aaKnown RBP eCLIP17.43■□□□□ 0.383e-6■■■■□ 23.1
SPG7-216ENST00000567138 C19orf44Q9H6X5 657 aa17.43■□□□□ 0.38
SPG7-216ENST00000567138 SPHKAPQ2M3C7 1700 aa17.43■□□□□ 0.38
SPG7-216ENST00000567138 ASXL1Q8IXJ9 1541 aa17.43■□□□□ 0.38
SPG7-216ENST00000567138 NUTM2BA6NNL0 878 aaPredicted RBP17.41■□□□□ 0.38
SPG7-216ENST00000567138 NUTM2EB1AL46 878 aaPredicted RBP17.41■□□□□ 0.38
SPG7-216ENST00000567138 NUTM2AQ8IVF1 878 aaPredicted RBP17.41■□□□□ 0.38
SPG7-216ENST00000567138 BRINP3Q76B58 766 aa17.4■□□□□ 0.38
SPG7-216ENST00000567138 NALCNQ8IZF0 1738 aa17.4■□□□□ 0.38
SPG7-216ENST00000567138 AMOTL2Q9Y2J4 779 aa17.4■□□□□ 0.38
SPG7-216ENST00000567138 SETBP1Q9Y6X0 1596 aa17.39■□□□□ 0.37
SPG7-216ENST00000567138 DCCP43146 1447 aa17.39■□□□□ 0.37
SPG7-216ENST00000567138 MST1RQ04912 1400 aa17.37■□□□□ 0.37
SPG7-216ENST00000567138 CDK12Q9NYV4 1490 aaPredicted RBP17.37■□□□□ 0.37
SPG7-216ENST00000567138 RXRBP28702 533 aa17.37■□□□□ 0.37
SPG7-216ENST00000567138 AFF2P51816 1311 aa17.36■□□□□ 0.37
SPG7-216ENST00000567138 ROCK1Q13464 1354 aa17.35■□□□□ 0.37
SPG7-216ENST00000567138 SETD5Q9C0A6 1442 aa17.35■□□□□ 0.37
SPG7-216ENST00000567138 NUP155O75694 1391 aa17.34■□□□□ 0.37
SPG7-216ENST00000567138 RGS12O14924 1447 aa17.33■□□□□ 0.37
SPG7-216ENST00000567138 CLTCL1P53675 1640 aa17.32■□□□□ 0.36
SPG7-216ENST00000567138 KIF1BO60333 1816 aa17.32■□□□□ 0.36
SPG7-216ENST00000567138 ADGRL3Q9HAR2 1447 aa17.32■□□□□ 0.36
SPG7-216ENST00000567138 DDX17Q92841 729 aaKnown RBP17.31■□□□□ 0.36
SPG7-216ENST00000567138 METP08581 1390 aa17.31■□□□□ 0.36
SPG7-216ENST00000567138 NEXMIFQ5QGS0 1516 aa17.3■□□□□ 0.36
SPG7-216ENST00000567138 PNPLA6Q8IY17 1366 aa17.3■□□□□ 0.36
SPG7-216ENST00000567138 C8orf37Q96NL8 207 aa17.29■□□□□ 0.36
SPG7-216ENST00000567138 ITGAEP38570 1179 aa17.28■□□□□ 0.36
SPG7-216ENST00000567138 ZNF326Q5BKZ1 582 aaKnown RBP17.28■□□□□ 0.36
SPG7-216ENST00000567138 LAMC1P11047 1609 aa17.27■□□□□ 0.36
SPG7-216ENST00000567138 ADRA2BP18089 450 aa17.27■□□□□ 0.35
SPG7-216ENST00000567138 LRRC59Q96AG4 307 aaKnown RBP17.27■□□□□ 0.35
SPG7-216ENST00000567138 QTRT2Q9H974 415 aaKnown RBP17.25■□□□□ 0.35
SPG7-216ENST00000567138 C1orf167Q5SNV9 1468 aa17.24■□□□□ 0.35
SPG7-216ENST00000567138 RBM6P78332 1123 aaKnown RBP17.24■□□□□ 0.35
SPG7-216ENST00000567138 ADAMTS2O95450 1211 aa17.22■□□□□ 0.35
SPG7-216ENST00000567138 MARF1Q9Y4F3 1742 aaKnown RBP17.21■□□□□ 0.35
SPG7-216ENST00000567138 COL22A1Q8NFW1 1626 aaPredicted RBP17.21■□□□□ 0.35
SPG7-216ENST00000567138 NGLY1Q96IV0 654 aa17.2■□□□□ 0.34
SPG7-216ENST00000567138 PTCH1Q13635 1447 aa17.2■□□□□ 0.34
SPG7-216ENST00000567138 PPLO60437 1756 aa17.19■□□□□ 0.34
SPG7-216ENST00000567138 ROBO2Q9HCK4 1378 aa17.17■□□□□ 0.34
SPG7-216ENST00000567138 ORAI2Q96SN7 254 aa17.16■□□□□ 0.34
SPG7-216ENST00000567138 ATAD2Q6PL18 1390 aa17.16■□□□□ 0.34
SPG7-216ENST00000567138 PPARGC1BQ86YN6 1023 aaKnown RBP17.15■□□□□ 0.34
SPG7-216ENST00000567138 SOS2Q07890 1332 aaPredicted RBP17.15■□□□□ 0.34
SPG7-216ENST00000567138 USP21Q9UK80 565 aa17.15■□□□□ 0.34
SPG7-216ENST00000567138 ATRNO75882 1429 aa17.13■□□□□ 0.33
SPG7-216ENST00000567138 CDC42BPGQ6DT37 1551 aa17.12■□□□□ 0.33
SPG7-216ENST00000567138 TRPC5Q9UL62 973 aaPredicted RBP17.12■□□□□ 0.33
SPG7-216ENST00000567138 PRAG1Q86YV5 1406 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms