RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 XIRP1Q702N8 1843 aaKnown RBP24.76■■□□□ 1.55
CLN6-208ENST00000567060 EID1Q9Y6B2 187 aa24.74■■□□□ 1.55
CLN6-208ENST00000567060 SLC4A1APQ9BWU0 796 aaKnown RBP24.72■■□□□ 1.55
CLN6-208ENST00000567060 E9PCH4 1651 aa24.72■■□□□ 1.55
CLN6-208ENST00000567060 TMEM2Q9UHN6 1383 aa24.71■■□□□ 1.55
CLN6-208ENST00000567060 NOS1P29475 1434 aa24.7■■□□□ 1.55
CLN6-208ENST00000567060 FAM135BQ49AJ0 1406 aa24.7■■□□□ 1.55
CLN6-208ENST00000567060 MPHOSPH9Q99550 1183 aa24.69■■□□□ 1.54
CLN6-208ENST00000567060 IDI1Q13907 227 aa24.68■■□□□ 1.54
CLN6-208ENST00000567060 PIK3C2BO00750 1634 aa24.67■■□□□ 1.54
CLN6-208ENST00000567060 TMEM94Q12767 1356 aa24.67■■□□□ 1.54
CLN6-208ENST00000567060 KCNA6P17658 529 aa24.66■■□□□ 1.54
CLN6-208ENST00000567060 POTEAQ6S8J7 498 aa24.66■■□□□ 1.54
CLN6-208ENST00000567060 RBM33Q96EV2 1170 aaKnown RBP24.65■■□□□ 1.54
CLN6-208ENST00000567060 SLC52A1Q9NWF4 448 aa24.65■■□□□ 1.54
CLN6-208ENST00000567060 SLC26A8Q96RN1 970 aa24.64■■□□□ 1.54
CLN6-208ENST00000567060 STAG3Q9UJ98 1225 aa24.64■■□□□ 1.54
CLN6-208ENST00000567060 PCGF6Q9BYE7 350 aa24.63■■□□□ 1.53
CLN6-208ENST00000567060 SPHKAPQ2M3C7 1700 aa24.62■■□□□ 1.53
CLN6-208ENST00000567060 PROSER2Q86WR7 435 aaPredicted RBP24.61■■□□□ 1.53
CLN6-208ENST00000567060 TRPM2O94759 1503 aa24.59■■□□□ 1.53
CLN6-208ENST00000567060 KDM5AP29375 1690 aaKnown RBP24.59■■□□□ 1.53
CLN6-208ENST00000567060 ROBO1Q9Y6N7 1651 aa24.55■■□□□ 1.52
CLN6-208ENST00000567060 SLAIN2Q9P270 581 aa24.51■■□□□ 1.51
CLN6-208ENST00000567060 CCDC144AA2RUR9 1427 aa24.48■■□□□ 1.51
CLN6-208ENST00000567060 ADGRB3O60242 1522 aa24.48■■□□□ 1.51
CLN6-208ENST00000567060 NWD1Q149M9 1564 aa24.47■■□□□ 1.51
CLN6-208ENST00000567060 NKTRP30414 1462 aaKnown RBP24.47■■□□□ 1.51
CLN6-208ENST00000567060 ANKRD30BQ9BXX2 1392 aa24.47■■□□□ 1.51
CLN6-208ENST00000567060 BCANQ96GW7 911 aa24.46■■□□□ 1.51
CLN6-208ENST00000567060 MSH6P52701 1360 aa24.45■■□□□ 1.5
CLN6-208ENST00000567060 DHX57Q6P158 1386 aaKnown RBP24.45■■□□□ 1.5
CLN6-208ENST00000567060 CLTCL1P53675 1640 aa24.44■■□□□ 1.5
CLN6-208ENST00000567060 FOXD1Q16676 465 aa24.44■■□□□ 1.5
CLN6-208ENST00000567060 TMEM131LA2VDJ0 1609 aa24.43■■□□□ 1.5
CLN6-208ENST00000567060 KIF1BO60333 1816 aa24.43■■□□□ 1.5
CLN6-208ENST00000567060 ZFYVE9O95405 1425 aa24.43■■□□□ 1.5
CLN6-208ENST00000567060 JCADQ9P266 1359 aa24.42■■□□□ 1.5
CLN6-208ENST00000567060 PLEKHG1Q9ULL1 1385 aa24.41■■□□□ 1.5
CLN6-208ENST00000567060 HDGFP51858 240 aaKnown RBP24.39■■□□□ 1.49
CLN6-208ENST00000567060 PHLPP1O60346 1717 aa24.38■■□□□ 1.49
CLN6-208ENST00000567060 CHD2O14647 1828 aaKnown RBP24.38■■□□□ 1.49
CLN6-208ENST00000567060 TBX22Q9Y458 520 aa24.38■■□□□ 1.49
CLN6-208ENST00000567060 RIMS2Q9UQ26 1411 aa24.36■■□□□ 1.49
CLN6-208ENST00000567060 CLSPNQ9HAW4 1339 aa24.35■■□□□ 1.49
CLN6-208ENST00000567060 RPGRIP1LQ68CZ1 1315 aa24.35■■□□□ 1.49
CLN6-208ENST00000567060 MYO5BQ9ULV0 1848 aa24.34■■□□□ 1.49
CLN6-208ENST00000567060 PPP1R15AO75807 674 aaPredicted RBP24.34■■□□□ 1.49
CLN6-208ENST00000567060 SETD1AO15047 1707 aaKnown RBP24.34■■□□□ 1.49
CLN6-208ENST00000567060 COL16A1Q07092 1604 aaPredicted RBP24.33■■□□□ 1.49
CLN6-208ENST00000567060 CHGAP10645 457 aaKnown RBP24.33■■□□□ 1.49
CLN6-208ENST00000567060 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.33■■□□□ 1.49
CLN6-208ENST00000567060 SPATA31E1Q6ZUB1 1445 aa24.33■■□□□ 1.49
CLN6-208ENST00000567060 NCOA3Q9Y6Q9 1424 aa24.33■■□□□ 1.49
CLN6-208ENST00000567060 LRP6O75581 1613 aa24.32■■□□□ 1.48
CLN6-208ENST00000567060 ADAMTS13Q76LX8 1427 aa24.3■■□□□ 1.48
CLN6-208ENST00000567060 NUTM2DQ5VT03 806 aaPredicted RBP24.3■■□□□ 1.48
CLN6-208ENST00000567060 STAC3Q96MF2 364 aa24.29■■□□□ 1.48
CLN6-208ENST00000567060 C19orf44Q9H6X5 657 aa24.29■■□□□ 1.48
CLN6-208ENST00000567060 SPATA31A6Q5VVP1 1343 aa24.29■■□□□ 1.48
CLN6-208ENST00000567060 ZNF326Q5BKZ1 582 aaKnown RBP24.27■■□□□ 1.48
CLN6-208ENST00000567060 C14orf37Q86TY3 774 aa24.26■■□□□ 1.47
CLN6-208ENST00000567060 CADPS2Q86UW7 1296 aa24.26■■□□□ 1.47
CLN6-208ENST00000567060 UPF1Q92900 1129 aaKnown RBP eCLIP24.26■■□□□ 1.475e-10■■■□□ 16.5
CLN6-208ENST00000567060 NEXMIFQ5QGS0 1516 aa24.25■■□□□ 1.47
CLN6-208ENST00000567060 ZNF772Q68DY9 489 aaPredicted RBP24.24■■□□□ 1.47
CLN6-208ENST00000567060 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.24■■□□□ 1.47
CLN6-208ENST00000567060 VGFO15240 615 aaPredicted RBP24.23■■□□□ 1.47
CLN6-208ENST00000567060 ATF3P18847 181 aa24.23■■□□□ 1.47
CLN6-208ENST00000567060 MEX3CQ5U5Q3 659 aaKnown RBP24.23■■□□□ 1.47
CLN6-208ENST00000567060 AHDC1Q5TGY3 1603 aaPredicted RBP24.22■■□□□ 1.47
CLN6-208ENST00000567060 PIK3R4Q99570 1358 aa24.22■■□□□ 1.47
CLN6-208ENST00000567060 PPLO60437 1756 aa24.21■■□□□ 1.47
CLN6-208ENST00000567060 BRINP3Q76B58 766 aa24.21■■□□□ 1.47
CLN6-208ENST00000567060 AMOTL2Q9Y2J4 779 aa24.21■■□□□ 1.47
CLN6-208ENST00000567060 PTPRUQ92729 1446 aa24.2■■□□□ 1.46
CLN6-208ENST00000567060 IFT172Q9UG01 1749 aa24.2■■□□□ 1.46
CLN6-208ENST00000567060 MYOM2P54296 1465 aa24.18■■□□□ 1.46
CLN6-208ENST00000567060 RGL3Q3MIN7 710 aa24.17■■□□□ 1.46
CLN6-208ENST00000567060 SHPRHQ149N8 1683 aa24.17■■□□□ 1.46
CLN6-208ENST00000567060 DIP2AQ14689 1571 aa24.16■■□□□ 1.46
CLN6-208ENST00000567060 RXRBP28702 533 aa24.16■■□□□ 1.46
CLN6-208ENST00000567060 CCER1Q8TC90 406 aaPredicted RBP24.15■■□□□ 1.46
CLN6-208ENST00000567060 NUTM2BA6NNL0 878 aaPredicted RBP24.14■■□□□ 1.45
CLN6-208ENST00000567060 NUTM2EB1AL46 878 aaPredicted RBP24.14■■□□□ 1.45
CLN6-208ENST00000567060 NUTM2AQ8IVF1 878 aaPredicted RBP24.14■■□□□ 1.45
CLN6-208ENST00000567060 SETBP1Q9Y6X0 1596 aa24.14■■□□□ 1.45
CLN6-208ENST00000567060 SIN3AQ96ST3 1273 aa24.13■■□□□ 1.45
CLN6-208ENST00000567060 TIMELESSQ9UNS1 1208 aa24.12■■□□□ 1.45
CLN6-208ENST00000567060 NRXN1Q9ULB1 1477 aa24.12■■□□□ 1.45
CLN6-208ENST00000567060 SRCAPQ6ZRS2 3230 aa24.11■■□□□ 1.45
CLN6-208ENST00000567060 NEUROD1Q13562 356 aa24.09■■□□□ 1.45
CLN6-208ENST00000567060 AFF2P51816 1311 aa24.09■■□□□ 1.45
CLN6-208ENST00000567060 DCCP43146 1447 aa24.08■■□□□ 1.44
CLN6-208ENST00000567060 TONSLQ96HA7 1378 aa24.07■■□□□ 1.44
CLN6-208ENST00000567060 ASXL1Q8IXJ9 1541 aa24.07■■□□□ 1.44
CLN6-208ENST00000567060 DCAF11Q8TEB1 546 aa24.07■■□□□ 1.44
CLN6-208ENST00000567060 PIK3C2GO75747 1445 aa24.07■■□□□ 1.44
CLN6-208ENST00000567060 MST1RQ04912 1400 aa24.07■■□□□ 1.44
CLN6-208ENST00000567060 CDK12Q9NYV4 1490 aaPredicted RBP24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms