RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 PPP1R15AO75807 674 aaPredicted RBP28.33■■■□□ 2.13
IFT140-208ENST00000566818 SCAF1Q9H7N4 1312 aaKnown RBP28.33■■■□□ 2.13
IFT140-208ENST00000566818 BCANQ96GW7 911 aa28.32■■■□□ 2.12
IFT140-208ENST00000566818 PLEKHG1Q9ULL1 1385 aa28.31■■■□□ 2.12
IFT140-208ENST00000566818 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.3■■■□□ 2.12
IFT140-208ENST00000566818 PIP4K2BP78356 416 aa28.29■■■□□ 2.12
IFT140-208ENST00000566818 SLC26A8Q96RN1 970 aa28.29■■■□□ 2.12
IFT140-208ENST00000566818 NWD1Q149M9 1564 aa28.26■■■□□ 2.11
IFT140-208ENST00000566818 KCNA6P17658 529 aa28.25■■■□□ 2.11
IFT140-208ENST00000566818 NKTRP30414 1462 aaKnown RBP28.25■■■□□ 2.11
IFT140-208ENST00000566818 ALKQ9UM73 1620 aa28.24■■■□□ 2.11
IFT140-208ENST00000566818 TRPM2O94759 1503 aa28.23■■■□□ 2.11
IFT140-208ENST00000566818 DIP2AQ14689 1571 aa28.22■■■□□ 2.11
IFT140-208ENST00000566818 TRIM52Q96A61 297 aa28.22■■■□□ 2.11
IFT140-208ENST00000566818 XIRP1Q702N8 1843 aaKnown RBP28.22■■■□□ 2.11
IFT140-208ENST00000566818 TMEM94Q12767 1356 aa28.18■■■□□ 2.1
IFT140-208ENST00000566818 DISP3Q9P2K9 1392 aa28.18■■■□□ 2.1
IFT140-208ENST00000566818 CLTCL1P53675 1640 aa28.18■■■□□ 2.1
IFT140-208ENST00000566818 SENP3Q9H4L4 574 aaPredicted RBP28.17■■■□□ 2.1
IFT140-208ENST00000566818 HSPA1LP34931 641 aa28.15■■■□□ 2.1
IFT140-208ENST00000566818 NUTM2DQ5VT03 806 aaPredicted RBP28.15■■■□□ 2.1
IFT140-208ENST00000566818 PROSER2Q86WR7 435 aaPredicted RBP28.15■■■□□ 2.1
IFT140-208ENST00000566818 TBX22Q9Y458 520 aa28.15■■■□□ 2.1
IFT140-208ENST00000566818 CHD2O14647 1828 aaKnown RBP28.15■■■□□ 2.1
IFT140-208ENST00000566818 ADAMTS13Q76LX8 1427 aa28.13■■■□□ 2.09
IFT140-208ENST00000566818 ZNF326Q5BKZ1 582 aaKnown RBP28.13■■■□□ 2.09
IFT140-208ENST00000566818 SLC4A1APQ9BWU0 796 aaKnown RBP28.13■■■□□ 2.09
IFT140-208ENST00000566818 KIF1BO60333 1816 aa28.12■■■□□ 2.09
IFT140-208ENST00000566818 PIK3R4Q99570 1358 aa28.11■■■□□ 2.09
IFT140-208ENST00000566818 SETBP1Q9Y6X0 1596 aa28.07■■■□□ 2.08
IFT140-208ENST00000566818 MSH6P52701 1360 aa28.07■■■□□ 2.08
IFT140-208ENST00000566818 NEXMIFQ5QGS0 1516 aa28.06■■■□□ 2.08
IFT140-208ENST00000566818 NRXN3Q9Y4C0 1643 aa28.04■■■□□ 2.08
IFT140-208ENST00000566818 ACIN1Q9UKV3 1341 aaKnown RBP28.03■■■□□ 2.08
IFT140-208ENST00000566818 NCOA3Q9Y6Q9 1424 aa28.02■■■□□ 2.08
IFT140-208ENST00000566818 RBM33Q96EV2 1170 aaKnown RBP28.02■■■□□ 2.08
IFT140-208ENST00000566818 FAM135BQ49AJ0 1406 aa28.01■■■□□ 2.07
IFT140-208ENST00000566818 MED1Q15648 1581 aaPredicted RBP27.98■■■□□ 2.07
IFT140-208ENST00000566818 SETD5Q9C0A6 1442 aa27.96■■■□□ 2.07
IFT140-208ENST00000566818 C14orf37Q86TY3 774 aa27.96■■■□□ 2.07
IFT140-208ENST00000566818 ROBO1Q9Y6N7 1651 aa27.96■■■□□ 2.07
IFT140-208ENST00000566818 XRN1Q8IZH2 1706 aaKnown RBP27.95■■■□□ 2.07
IFT140-208ENST00000566818 CCDC144AA2RUR9 1427 aa27.94■■■□□ 2.06
IFT140-208ENST00000566818 PTPRUQ92729 1446 aa27.94■■■□□ 2.06
IFT140-208ENST00000566818 AMOTL2Q9Y2J4 779 aa27.94■■■□□ 2.06
IFT140-208ENST00000566818 RPGRIP1LQ68CZ1 1315 aa27.93■■■□□ 2.06
IFT140-208ENST00000566818 MPHOSPH9Q99550 1183 aa27.93■■■□□ 2.06
IFT140-208ENST00000566818 VGFO15240 615 aaPredicted RBP27.92■■■□□ 2.06
IFT140-208ENST00000566818 FOXD1Q16676 465 aa27.92■■■□□ 2.06
IFT140-208ENST00000566818 PPLO60437 1756 aa27.89■■■□□ 2.06
IFT140-208ENST00000566818 METP08581 1390 aa27.88■■■□□ 2.05
IFT140-208ENST00000566818 SLAIN2Q9P270 581 aa27.88■■■□□ 2.05
IFT140-208ENST00000566818 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.88■■■□□ 2.05
IFT140-208ENST00000566818 C19orf44Q9H6X5 657 aa27.87■■■□□ 2.05
IFT140-208ENST00000566818 CADPS2Q86UW7 1296 aa27.86■■■□□ 2.05
IFT140-208ENST00000566818 ATF3P18847 181 aa27.85■■■□□ 2.05
IFT140-208ENST00000566818 ILDR2Q71H61 639 aa27.85■■■□□ 2.05
IFT140-208ENST00000566818 RAB3GAP2Q9H2M9 1393 aa27.85■■■□□ 2.05
IFT140-208ENST00000566818 DCCP43146 1447 aa27.84■■■□□ 2.05
IFT140-208ENST00000566818 SETD1AO15047 1707 aaKnown RBP27.82■■■□□ 2.04
IFT140-208ENST00000566818 SPATA31E1Q6ZUB1 1445 aa27.81■■■□□ 2.04
IFT140-208ENST00000566818 PHLPP1O60346 1717 aa27.81■■■□□ 2.04
IFT140-208ENST00000566818 PHF23Q9BUL5 403 aaPredicted RBP27.8■■■□□ 2.04
IFT140-208ENST00000566818 PTCH1Q13635 1447 aa27.78■■■□□ 2.04
IFT140-208ENST00000566818 ANKRD30BQ9BXX2 1392 aa27.77■■■□□ 2.04
IFT140-208ENST00000566818 IFT172Q9UG01 1749 aa27.77■■■□□ 2.04
IFT140-208ENST00000566818 ADGRL3Q9HAR2 1447 aa27.76■■■□□ 2.04
IFT140-208ENST00000566818 PRAG1Q86YV5 1406 aa27.75■■■□□ 2.03
IFT140-208ENST00000566818 RGL3Q3MIN7 710 aa27.74■■■□□ 2.03
IFT140-208ENST00000566818 NALCNQ8IZF0 1738 aa27.72■■■□□ 2.03
IFT140-208ENST00000566818 AHDC1Q5TGY3 1603 aaPredicted RBP27.72■■■□□ 2.03
IFT140-208ENST00000566818 COL16A1Q07092 1604 aaPredicted RBP27.7■■■□□ 2.03
IFT140-208ENST00000566818 ADGRF5Q8IZF2 1346 aa27.69■■■□□ 2.02
IFT140-208ENST00000566818 MST1RQ04912 1400 aa27.69■■■□□ 2.02
IFT140-208ENST00000566818 SOCS7O14512 581 aa27.69■■■□□ 2.02
IFT140-208ENST00000566818 JCADQ9P266 1359 aa27.69■■■□□ 2.02
IFT140-208ENST00000566818 ROBO2Q9HCK4 1378 aa27.68■■■□□ 2.02
IFT140-208ENST00000566818 ASXL1Q8IXJ9 1541 aa27.67■■■□□ 2.02
IFT140-208ENST00000566818 PIK3C2GO75747 1445 aa27.66■■■□□ 2.02
IFT140-208ENST00000566818 HRCP23327 699 aa27.65■■■□□ 2.02
IFT140-208ENST00000566818 BRINP3Q76B58 766 aa27.65■■■□□ 2.02
IFT140-208ENST00000566818 MYOM2P54296 1465 aa27.63■■■□□ 2.01
IFT140-208ENST00000566818 LAMC1P11047 1609 aa27.6■■■□□ 2.01
IFT140-208ENST00000566818 TECPR2O15040 1411 aa27.59■■■□□ 2.01
IFT140-208ENST00000566818 KNDC1Q76NI1 1749 aa27.59■■■□□ 2.01
IFT140-208ENST00000566818 NHSL1Q5SYE7 1610 aa27.59■■■□□ 2.01
IFT140-208ENST00000566818 LRPPRCP42704 1394 aaKnown RBP27.59■■■□□ 2.01
IFT140-208ENST00000566818 SHPRHQ149N8 1683 aa27.59■■■□□ 2.01
IFT140-208ENST00000566818 NRXN1Q9ULB1 1477 aa27.58■■■□□ 2.01
IFT140-208ENST00000566818 C1orf167Q5SNV9 1468 aa27.57■■■□□ 2
IFT140-208ENST00000566818 CDC42BPGQ6DT37 1551 aa27.56■■■□□ 2
IFT140-208ENST00000566818 SPATA31A6Q5VVP1 1343 aa27.56■■■□□ 2
IFT140-208ENST00000566818 ABCC11Q96J66 1382 aa27.54■■■□□ 2
IFT140-208ENST00000566818 STK26Q9P289 416 aa27.54■■■□□ 2
IFT140-208ENST00000566818 YTHDC2Q9H6S0 1430 aaKnown RBP27.52■■■□□ 2
IFT140-208ENST00000566818 TMEM132EQ6IEE7 984 aa27.5■■□□□ 1.99
IFT140-208ENST00000566818 C14orf93Q9H972 538 aaKnown RBP27.5■■□□□ 1.99
IFT140-208ENST00000566818 RGS17Q9UGC6 210 aaPredicted RBP27.48■■□□□ 1.99
IFT140-208ENST00000566818 DHX57Q6P158 1386 aaKnown RBP27.48■■□□□ 1.99
IFT140-208ENST00000566818 LRP6O75581 1613 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms