RNA–Protein interactions for RNA: ENST00000566637.5

CTU2-208, Transcript of cytosolic thiouridylase subunit 2, humanhuman

TSL 2

Gene CTU2, Length 1,619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-208ENST00000566637 NRXN1Q9ULB1 1477 aa28.91■■■□□ 2.22
CTU2-208ENST00000566637 NEXMIFQ5QGS0 1516 aa28.9■■■□□ 2.22
CTU2-208ENST00000566637 TNRQ92752 1358 aa28.89■■■□□ 2.22
CTU2-208ENST00000566637 NBPF1Q3BBV0 1214 aa28.88■■■□□ 2.21
CTU2-208ENST00000566637 STAG3Q9UJ98 1225 aa28.88■■■□□ 2.21
CTU2-208ENST00000566637 ADGRF5Q8IZF2 1346 aa28.88■■■□□ 2.21
CTU2-208ENST00000566637 C3P01024 1663 aa28.86■■■□□ 2.21
CTU2-208ENST00000566637 VGFO15240 615 aaPredicted RBP28.83■■■□□ 2.21
CTU2-208ENST00000566637 POLR1AO95602 1720 aaPredicted RBP28.83■■■□□ 2.21
CTU2-208ENST00000566637 PIK3C2GO75747 1445 aa28.82■■■□□ 2.2
CTU2-208ENST00000566637 A2ML1A8K2U0 1454 aa28.8■■■□□ 2.2
CTU2-208ENST00000566637 ZFYVE9O95405 1425 aa28.8■■■□□ 2.2
CTU2-208ENST00000566637 IQGAP1P46940 1657 aa28.79■■■□□ 2.2
CTU2-208ENST00000566637 KDM5AP29375 1690 aaKnown RBP28.78■■■□□ 2.2
CTU2-208ENST00000566637 RIMS1Q86UR5 1692 aaKnown RBP28.78■■■□□ 2.2
CTU2-208ENST00000566637 DDX10Q13206 875 aaKnown RBP28.78■■■□□ 2.2
CTU2-208ENST00000566637 CFAP70Q5T0N1 1121 aa28.77■■■□□ 2.2
CTU2-208ENST00000566637 WASHC2AQ641Q2 1341 aa28.77■■■□□ 2.2
CTU2-208ENST00000566637 SCAF11Q99590 1463 aaKnown RBP28.76■■■□□ 2.2
CTU2-208ENST00000566637 NLRP1Q9C000 1473 aa28.76■■■□□ 2.2
CTU2-208ENST00000566637 ADAMTSL3P82987 1691 aa28.76■■■□□ 2.2
CTU2-208ENST00000566637 SETBP1Q9Y6X0 1596 aa28.76■■■□□ 2.19
CTU2-208ENST00000566637 CCDC7Q96M83 1385 aa28.76■■■□□ 2.19
CTU2-208ENST00000566637 ST20-MTHFSA0A0A6YYL1 179 aa28.76■■■□□ 2.19
CTU2-208ENST00000566637 CEBPAP49715 358 aaPredicted RBP28.76■■■□□ 2.19
CTU2-208ENST00000566637 NUTM2DQ5VT03 806 aaPredicted RBP28.73■■■□□ 2.19
CTU2-208ENST00000566637 C14orf93Q9H972 538 aaKnown RBP28.72■■■□□ 2.19
CTU2-208ENST00000566637 EIF3AQ14152 1382 aaKnown RBP28.72■■■□□ 2.19
CTU2-208ENST00000566637 RIMS2Q9UQ26 1411 aa28.71■■■□□ 2.19
CTU2-208ENST00000566637 UBR1Q8IWV7 1749 aa28.71■■■□□ 2.19
CTU2-208ENST00000566637 C11orf95C9JLR9 678 aaPredicted RBP28.7■■■□□ 2.19
CTU2-208ENST00000566637 PLPPR3Q6T4P5 718 aa28.7■■■□□ 2.19
CTU2-208ENST00000566637 KIF7Q2M1P5 1343 aa28.69■■■□□ 2.18
CTU2-208ENST00000566637 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.66■■■□□ 2.18
CTU2-208ENST00000566637 HDGFP51858 240 aaKnown RBP28.65■■■□□ 2.18
CTU2-208ENST00000566637 ADGRB1O14514 1584 aa28.65■■■□□ 2.18
CTU2-208ENST00000566637 MYO3AQ8NEV4 1616 aa28.64■■■□□ 2.18
CTU2-208ENST00000566637 MIER1Q8N108 512 aa28.63■■■□□ 2.17
CTU2-208ENST00000566637 TMEM2Q9UHN6 1383 aa28.6■■■□□ 2.17
CTU2-208ENST00000566637 TESK2Q96S53 571 aa28.58■■■□□ 2.17
CTU2-208ENST00000566637 POLR3GLQ9BT43 218 aa28.58■■■□□ 2.17
CTU2-208ENST00000566637 ALKQ9UM73 1620 aa28.57■■■□□ 2.16
CTU2-208ENST00000566637 TMF1P82094 1093 aa28.57■■■□□ 2.16
CTU2-208ENST00000566637 TMEM132EQ6IEE7 984 aa28.55■■■□□ 2.16
CTU2-208ENST00000566637 ASXL1Q8IXJ9 1541 aa28.54■■■□□ 2.16
CTU2-208ENST00000566637 SLC24A1O60721 1099 aa28.53■■■□□ 2.16
CTU2-208ENST00000566637 CEP170BQ9Y4F5 1589 aaPredicted RBP28.53■■■□□ 2.16
CTU2-208ENST00000566637 SENP3Q9H4L4 574 aaPredicted RBP28.51■■■□□ 2.15
CTU2-208ENST00000566637 TRAK1Q9UPV9 953 aa28.51■■■□□ 2.15
CTU2-208ENST00000566637 DISP3Q9P2K9 1392 aa28.51■■■□□ 2.15
CTU2-208ENST00000566637 SLIT1O75093 1534 aa28.51■■■□□ 2.15
CTU2-208ENST00000566637 THEMISQ8N1K5 641 aaPredicted RBP28.5■■■□□ 2.15
CTU2-208ENST00000566637 CENPJQ9HC77 1338 aaPredicted RBP28.49■■■□□ 2.15
CTU2-208ENST00000566637 ARHGEF28Q8N1W1 1705 aaKnown RBP28.49■■■□□ 2.15
CTU2-208ENST00000566637 NRXN3Q9Y4C0 1643 aa28.49■■■□□ 2.15
CTU2-208ENST00000566637 ANP32CO43423 234 aa28.49■■■□□ 2.15
CTU2-208ENST00000566637 ARHGAP23Q9P227 1491 aa28.49■■■□□ 2.15
CTU2-208ENST00000566637 ZNF142P52746 1687 aaPredicted RBP28.48■■■□□ 2.15
CTU2-208ENST00000566637 SETD1AO15047 1707 aaKnown RBP28.48■■■□□ 2.15
CTU2-208ENST00000566637 QRICH2Q9H0J4 1663 aa28.48■■■□□ 2.15
CTU2-208ENST00000566637 CDCA8Q53HL2 280 aa28.47■■■□□ 2.15
CTU2-208ENST00000566637 EID1Q9Y6B2 187 aa28.47■■■□□ 2.15
CTU2-208ENST00000566637 PTPRMP28827 1452 aa28.47■■■□□ 2.15
CTU2-208ENST00000566637 SBNO2Q9Y2G9 1366 aa28.46■■■□□ 2.15
CTU2-208ENST00000566637 YTHDC2Q9H6S0 1430 aaKnown RBP28.45■■■□□ 2.15
CTU2-208ENST00000566637 BCANQ96GW7 911 aa28.44■■■□□ 2.14
CTU2-208ENST00000566637 PLEKHG1Q9ULL1 1385 aa28.44■■■□□ 2.14
CTU2-208ENST00000566637 TXNDC2Q86VQ3 553 aa28.43■■■□□ 2.14
CTU2-208ENST00000566637 SETD1BQ9UPS6 1966 aaKnown RBP28.43■■■□□ 2.14
CTU2-208ENST00000566637 STK26Q9P289 416 aa28.41■■■□□ 2.14
CTU2-208ENST00000566637 LRPPRCP42704 1394 aaKnown RBP28.39■■■□□ 2.14
CTU2-208ENST00000566637 LTKP29376 864 aa28.39■■■□□ 2.13
CTU2-208ENST00000566637 DLC1Q96QB1 1528 aa28.37■■■□□ 2.13
CTU2-208ENST00000566637 ADAMTS13Q76LX8 1427 aa28.34■■■□□ 2.13
CTU2-208ENST00000566637 KNDC1Q76NI1 1749 aa28.33■■■□□ 2.13
CTU2-208ENST00000566637 METP08581 1390 aa28.32■■■□□ 2.12
CTU2-208ENST00000566637 POGKQ9P215 609 aa28.32■■■□□ 2.12
CTU2-208ENST00000566637 ABCC11Q96J66 1382 aa28.32■■■□□ 2.12
CTU2-208ENST00000566637 DIP2AQ14689 1571 aa28.32■■■□□ 2.12
CTU2-208ENST00000566637 PRAM1Q96QH2 718 aa28.29■■■□□ 2.12
CTU2-208ENST00000566637 EVC2Q86UK5 1308 aa28.28■■■□□ 2.12
CTU2-208ENST00000566637 MED14O60244 1454 aa28.28■■■□□ 2.12
CTU2-208ENST00000566637 MYOM1P52179 1685 aa28.28■■■□□ 2.12
CTU2-208ENST00000566637 AEBP2Q6ZN18 517 aaPredicted RBP28.28■■■□□ 2.12
CTU2-208ENST00000566637 CCER2I3L3R5 266 aa28.27■■■□□ 2.12
CTU2-208ENST00000566637 SAFB2Q14151 953 aaKnown RBP eCLIP28.26■■■□□ 2.11
CTU2-208ENST00000566637 TECPR2O15040 1411 aa28.26■■■□□ 2.11
CTU2-208ENST00000566637 ANKLE2Q86XL3 938 aa28.25■■■□□ 2.11
CTU2-208ENST00000566637 CPS1P31327 1500 aa28.25■■■□□ 2.11
CTU2-208ENST00000566637 TULP4Q9NRJ4 1543 aa28.25■■■□□ 2.11
CTU2-208ENST00000566637 TBX22Q9Y458 520 aa28.24■■■□□ 2.11
CTU2-208ENST00000566637 PUS7Q96PZ0 661 aaKnown RBP28.22■■■□□ 2.11
CTU2-208ENST00000566637 SLC26A8Q96RN1 970 aa28.22■■■□□ 2.11
CTU2-208ENST00000566637 PRKRIP1Q9H875 184 aaPredicted RBP28.22■■■□□ 2.11
CTU2-208ENST00000566637 PANK3Q9H999 370 aa28.22■■■□□ 2.11
CTU2-208ENST00000566637 SIRT1Q96EB6 747 aa28.21■■■□□ 2.11
CTU2-208ENST00000566637 FAM135BQ49AJ0 1406 aa28.21■■■□□ 2.11
CTU2-208ENST00000566637 MINK1Q8N4C8 1332 aaPredicted RBP28.21■■■□□ 2.11
CTU2-208ENST00000566637 KDM4FA0A1W2PPD8 638 aa28.17■■■□□ 2.1
CTU2-208ENST00000566637 PLEKHH1Q9ULM0 1364 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms