RNA–Protein interactions for RNA: ENST00000566426.1

PDXDC1-213, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 283 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-213ENST00000566426 ADGRB3O60242 1522 aa31.56■■■□□ 2.64
PDXDC1-213ENST00000566426 HDGFP51858 240 aaKnown RBP31.55■■■□□ 2.64
PDXDC1-213ENST00000566426 SLAIN2Q9P270 581 aa31.54■■■□□ 2.64
PDXDC1-213ENST00000566426 NWD1Q149M9 1564 aa31.53■■■□□ 2.64
PDXDC1-213ENST00000566426 RPRD2Q5VT52 1461 aaKnown RBP31.48■■■□□ 2.63
PDXDC1-213ENST00000566426 PPP1R15AO75807 674 aaPredicted RBP31.48■■■□□ 2.63
PDXDC1-213ENST00000566426 JCADQ9P266 1359 aa31.47■■■□□ 2.63
PDXDC1-213ENST00000566426 PLEKHG1Q9ULL1 1385 aa31.46■■■□□ 2.63
PDXDC1-213ENST00000566426 ADGRL2O95490 1459 aa31.45■■■□□ 2.62
PDXDC1-213ENST00000566426 PHLPP1O60346 1717 aa31.43■■■□□ 2.62
PDXDC1-213ENST00000566426 ZFYVE9O95405 1425 aa31.42■■■□□ 2.62
PDXDC1-213ENST00000566426 ANKRD50Q9ULJ7 1429 aa31.41■■■□□ 2.62
PDXDC1-213ENST00000566426 RIMS2Q9UQ26 1411 aa31.41■■■□□ 2.62
PDXDC1-213ENST00000566426 TBX22Q9Y458 520 aa31.41■■■□□ 2.62
PDXDC1-213ENST00000566426 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.4■■■□□ 2.62
PDXDC1-213ENST00000566426 NCOA3Q9Y6Q9 1424 aa31.4■■■□□ 2.62
PDXDC1-213ENST00000566426 CHD2O14647 1828 aaKnown RBP31.39■■■□□ 2.62
PDXDC1-213ENST00000566426 FAM50AQ14320 339 aaKnown RBP31.38■■■□□ 2.61
PDXDC1-213ENST00000566426 C14orf37Q86TY3 774 aa31.38■■■□□ 2.61
PDXDC1-213ENST00000566426 CHGAP10645 457 aaKnown RBP31.34■■■□□ 2.61
PDXDC1-213ENST00000566426 SPATA31A6Q5VVP1 1343 aa31.33■■■□□ 2.61
PDXDC1-213ENST00000566426 CADPS2Q86UW7 1296 aa31.33■■■□□ 2.61
PDXDC1-213ENST00000566426 MYO5BQ9ULV0 1848 aa31.33■■■□□ 2.61
PDXDC1-213ENST00000566426 TMEM131LA2VDJ0 1609 aa31.32■■■□□ 2.6
PDXDC1-213ENST00000566426 GCC2Q8IWJ2 1684 aa31.32■■■□□ 2.6
PDXDC1-213ENST00000566426 C19orf44Q9H6X5 657 aa31.31■■■□□ 2.6
PDXDC1-213ENST00000566426 ATF3P18847 181 aa31.3■■■□□ 2.6
PDXDC1-213ENST00000566426 MEX3CQ5U5Q3 659 aaKnown RBP31.3■■■□□ 2.6
PDXDC1-213ENST00000566426 COL16A1Q07092 1604 aaPredicted RBP31.29■■■□□ 2.6
PDXDC1-213ENST00000566426 ZNF772Q68DY9 489 aaPredicted RBP31.29■■■□□ 2.6
PDXDC1-213ENST00000566426 PIK3R4Q99570 1358 aa31.28■■■□□ 2.6
PDXDC1-213ENST00000566426 DIP2AQ14689 1571 aa31.24■■■□□ 2.59
PDXDC1-213ENST00000566426 SETD1AO15047 1707 aaKnown RBP31.24■■■□□ 2.59
PDXDC1-213ENST00000566426 ADAMTS13Q76LX8 1427 aa31.24■■■□□ 2.59
PDXDC1-213ENST00000566426 NUTM2DQ5VT03 806 aaPredicted RBP31.23■■■□□ 2.59
PDXDC1-213ENST00000566426 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.2■■■□□ 2.58
PDXDC1-213ENST00000566426 LRP6O75581 1613 aa31.2■■■□□ 2.58
PDXDC1-213ENST00000566426 AHDC1Q5TGY3 1603 aaPredicted RBP31.19■■■□□ 2.58
PDXDC1-213ENST00000566426 UNC13BO14795 1591 aa31.18■■■□□ 2.58
PDXDC1-213ENST00000566426 AMOTL2Q9Y2J4 779 aa31.18■■■□□ 2.58
PDXDC1-213ENST00000566426 TRIM52Q96A61 297 aa31.16■■■□□ 2.58
PDXDC1-213ENST00000566426 TRPM2O94759 1503 aa31.15■■■□□ 2.58
PDXDC1-213ENST00000566426 E9PCH4 1651 aa31.14■■■□□ 2.58
PDXDC1-213ENST00000566426 SHPRHQ149N8 1683 aa31.14■■■□□ 2.58
PDXDC1-213ENST00000566426 UPF1Q92900 1129 aaKnown RBP eCLIP31.14■■■□□ 2.58
PDXDC1-213ENST00000566426 BRINP3Q76B58 766 aa31.13■■■□□ 2.57
PDXDC1-213ENST00000566426 RXRBP28702 533 aa31.12■■■□□ 2.57
PDXDC1-213ENST00000566426 ROCK1Q13464 1354 aa31.11■■■□□ 2.57
PDXDC1-213ENST00000566426 DCCP43146 1447 aa31.09■■■□□ 2.57
PDXDC1-213ENST00000566426 NUP155O75694 1391 aa31.08■■■□□ 2.57
PDXDC1-213ENST00000566426 NUTM2BA6NNL0 878 aaPredicted RBP31.08■■■□□ 2.57
PDXDC1-213ENST00000566426 NUTM2EB1AL46 878 aaPredicted RBP31.08■■■□□ 2.57
PDXDC1-213ENST00000566426 NUTM2AQ8IVF1 878 aaPredicted RBP31.08■■■□□ 2.57
PDXDC1-213ENST00000566426 IQGAP3Q86VI3 1631 aa31.08■■■□□ 2.57
PDXDC1-213ENST00000566426 PTPRUQ92729 1446 aa31.07■■■□□ 2.56
PDXDC1-213ENST00000566426 LRRC59Q96AG4 307 aaKnown RBP31.02■■■□□ 2.56
PDXDC1-213ENST00000566426 SETD5Q9C0A6 1442 aa31.01■■■□□ 2.55
PDXDC1-213ENST00000566426 CDK12Q9NYV4 1490 aaPredicted RBP31.01■■■□□ 2.55
PDXDC1-213ENST00000566426 ASXL1Q8IXJ9 1541 aa31■■■□□ 2.55
PDXDC1-213ENST00000566426 AFF2P51816 1311 aa30.99■■■□□ 2.55
PDXDC1-213ENST00000566426 ZNF326Q5BKZ1 582 aaKnown RBP30.99■■■□□ 2.55
PDXDC1-213ENST00000566426 MST1RQ04912 1400 aa30.97■■■□□ 2.55
PDXDC1-213ENST00000566426 SETBP1Q9Y6X0 1596 aa30.96■■■□□ 2.55
PDXDC1-213ENST00000566426 XRN1Q8IZH2 1706 aaKnown RBP30.95■■■□□ 2.55
PDXDC1-213ENST00000566426 ITGAEP38570 1179 aa30.93■■■□□ 2.54
PDXDC1-213ENST00000566426 NRXN3Q9Y4C0 1643 aa30.92■■■□□ 2.54
PDXDC1-213ENST00000566426 METP08581 1390 aa30.92■■■□□ 2.54
PDXDC1-213ENST00000566426 C8orf37Q96NL8 207 aa30.91■■■□□ 2.54
PDXDC1-213ENST00000566426 NHSL1Q5SYE7 1610 aa30.91■■■□□ 2.54
PDXDC1-213ENST00000566426 QTRT2Q9H974 415 aaKnown RBP30.9■■■□□ 2.54
PDXDC1-213ENST00000566426 RBM6P78332 1123 aaKnown RBP30.89■■■□□ 2.54
PDXDC1-213ENST00000566426 ADGRL3Q9HAR2 1447 aa30.89■■■□□ 2.53
PDXDC1-213ENST00000566426 SPHKAPQ2M3C7 1700 aa30.87■■■□□ 2.53
PDXDC1-213ENST00000566426 PNPLA6Q8IY17 1366 aa30.86■■■□□ 2.53
PDXDC1-213ENST00000566426 DDX17Q92841 729 aaKnown RBP30.84■■■□□ 2.53
PDXDC1-213ENST00000566426 NGLY1Q96IV0 654 aa30.82■■■□□ 2.52
PDXDC1-213ENST00000566426 RGS12O14924 1447 aa30.79■■■□□ 2.52
PDXDC1-213ENST00000566426 ADAMTS2O95450 1211 aa30.77■■■□□ 2.52
PDXDC1-213ENST00000566426 C1orf167Q5SNV9 1468 aa30.76■■■□□ 2.52
PDXDC1-213ENST00000566426 NEXMIFQ5QGS0 1516 aa30.76■■■□□ 2.51
PDXDC1-213ENST00000566426 NALCNQ8IZF0 1738 aa30.76■■■□□ 2.51
PDXDC1-213ENST00000566426 VGFO15240 615 aaPredicted RBP30.74■■■□□ 2.51
PDXDC1-213ENST00000566426 SOS2Q07890 1332 aaPredicted RBP30.72■■■□□ 2.51
PDXDC1-213ENST00000566426 CLTCL1P53675 1640 aa30.71■■■□□ 2.51
PDXDC1-213ENST00000566426 PTCH1Q13635 1447 aa30.71■■■□□ 2.51
PDXDC1-213ENST00000566426 USP21Q9UK80 565 aa30.7■■■□□ 2.51
PDXDC1-213ENST00000566426 ORAI2Q96SN7 254 aa30.69■■■□□ 2.5
PDXDC1-213ENST00000566426 TRPC5Q9UL62 973 aaPredicted RBP30.69■■■□□ 2.5
PDXDC1-213ENST00000566426 KIF1BO60333 1816 aa30.68■■■□□ 2.5
PDXDC1-213ENST00000566426 ATAD2Q6PL18 1390 aa30.68■■■□□ 2.5
PDXDC1-213ENST00000566426 LAMC1P11047 1609 aa30.67■■■□□ 2.5
PDXDC1-213ENST00000566426 FOXD1Q16676 465 aa30.66■■■□□ 2.5
PDXDC1-213ENST00000566426 ROBO2Q9HCK4 1378 aa30.66■■■□□ 2.5
PDXDC1-213ENST00000566426 FNBP4Q8N3X1 1017 aaPredicted RBP30.64■■■□□ 2.5
PDXDC1-213ENST00000566426 RPGRIP1LQ68CZ1 1315 aa30.64■■■□□ 2.5
PDXDC1-213ENST00000566426 PPARGC1BQ86YN6 1023 aaKnown RBP30.62■■■□□ 2.49
PDXDC1-213ENST00000566426 HFM1A2PYH4 1435 aa30.61■■■□□ 2.49
PDXDC1-213ENST00000566426 PRAG1Q86YV5 1406 aa30.6■■■□□ 2.49
PDXDC1-213ENST00000566426 NPHP3Q7Z494 1330 aa30.57■■■□□ 2.48
PDXDC1-213ENST00000566426 ESCO1Q5FWF5 840 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms