RNA–Protein interactions for RNA: ENST00000566376.3

TCF4-233, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-233ENST00000566376 PLEKHD1A6NEE1 506 aa10.62□□□□□ -0.71
TCF4-233ENST00000566376 PTGER2P43116 358 aa10.62□□□□□ -0.71
TCF4-233ENST00000566376 CIZ1Q9ULV3 898 aaPredicted RBP10.62□□□□□ -0.71
TCF4-233ENST00000566376 PTPRMP28827 1452 aa10.61□□□□□ -0.71
TCF4-233ENST00000566376 TRAPPC8Q9Y2L5 1435 aa10.61□□□□□ -0.71
TCF4-233ENST00000566376 PLA2G2EQ9NZK7 142 aa10.61□□□□□ -0.71
TCF4-233ENST00000566376 ZNF518AQ6AHZ1 1483 aa10.61□□□□□ -0.71
TCF4-233ENST00000566376 MAGI2Q86UL8 1455 aa10.61□□□□□ -0.71
TCF4-233ENST00000566376 RIMBP2O15034 1052 aa10.6□□□□□ -0.71
TCF4-233ENST00000566376 ZNF687Q8N1G0 1237 aa10.6□□□□□ -0.71
TCF4-233ENST00000566376 CROCC2H7BZ55 1655 aa10.6□□□□□ -0.71
TCF4-233ENST00000566376 PREX1Q8TCU6 1659 aa10.59□□□□□ -0.71
TCF4-233ENST00000566376 MLH3Q9UHC1 1453 aa10.58□□□□□ -0.72
TCF4-233ENST00000566376 MROH2AA6NES4 1674 aa10.57□□□□□ -0.72
TCF4-233ENST00000566376 LMTK3Q96Q04 1460 aa10.57□□□□□ -0.72
TCF4-233ENST00000566376 BOLA1Q9Y3E2 137 aa10.57□□□□□ -0.72
TCF4-233ENST00000566376 ATP7AQ04656 1500 aa10.57□□□□□ -0.72
TCF4-233ENST00000566376 C9orf84Q5VXU9 1444 aa10.57□□□□□ -0.72
TCF4-233ENST00000566376 ECM2O94769 699 aaPredicted RBP10.56□□□□□ -0.72
TCF4-233ENST00000566376 VPS8Q8N3P4 1428 aa10.56□□□□□ -0.72
TCF4-233ENST00000566376 STRCQ7RTU9 1775 aa10.55□□□□□ -0.72
TCF4-233ENST00000566376 AGLP35573 1532 aa10.55□□□□□ -0.72
TCF4-233ENST00000566376 CLTCQ00610 1675 aaKnown RBP10.55□□□□□ -0.72
TCF4-233ENST00000566376 ATP10AO60312 1499 aa10.55□□□□□ -0.72
TCF4-233ENST00000566376 ZNF467Q7Z7K2 595 aaPredicted RBP10.54□□□□□ -0.72
TCF4-233ENST00000566376 ATP1B4Q9UN42 357 aaPredicted RBP10.54□□□□□ -0.72
TCF4-233ENST00000566376 NCOA2Q15596 1464 aa10.54□□□□□ -0.72
TCF4-233ENST00000566376 MBD5Q9P267 1494 aa10.54□□□□□ -0.72
TCF4-233ENST00000566376 LOC105371045A0A1W2PR82 267 aa10.53□□□□□ -0.72
TCF4-233ENST00000566376 MAP3K1Q13233 1512 aa10.53□□□□□ -0.72
TCF4-233ENST00000566376 ARHGEF5Q12774 1597 aa10.52□□□□□ -0.72
TCF4-233ENST00000566376 CAMSAP2Q08AD1 1489 aa10.52□□□□□ -0.73
TCF4-233ENST00000566376 LRRC9Q6ZRR7 1453 aa10.52□□□□□ -0.73
TCF4-233ENST00000566376 SETD1BQ9UPS6 1966 aaKnown RBP10.52□□□□□ -0.73
TCF4-233ENST00000566376 ZNF142P52746 1687 aaPredicted RBP10.51□□□□□ -0.73
TCF4-233ENST00000566376 PKD2Q13563 968 aa10.51□□□□□ -0.73
TCF4-233ENST00000566376 TAOK2Q9UL54 1235 aa10.51□□□□□ -0.73
TCF4-233ENST00000566376 PSEN1P49768 467 aa10.5□□□□□ -0.73
TCF4-233ENST00000566376 EFCAB2Q5VUJ9 269 aa10.5□□□□□ -0.73
TCF4-233ENST00000566376 AFAP1Q8N556 730 aa10.5□□□□□ -0.73
TCF4-233ENST00000566376 MAST1Q9Y2H9 1570 aa10.5□□□□□ -0.73
TCF4-233ENST00000566376 MROH1Q8NDA8 1641 aa10.5□□□□□ -0.73
TCF4-233ENST00000566376 CDK11AQ9UQ88 783 aaPredicted RBP10.49□□□□□ -0.73
TCF4-233ENST00000566376 KIAA1107Q9UPP5 1409 aa10.49□□□□□ -0.73
TCF4-233ENST00000566376 MYO3AQ8NEV4 1616 aa10.48□□□□□ -0.73
TCF4-233ENST00000566376 RNF17Q9BXT8 1623 aaKnown RBP10.48□□□□□ -0.73
TCF4-233ENST00000566376 CEP152O94986 1710 aa10.48□□□□□ -0.73
TCF4-233ENST00000566376 MTUS2Q5JR59 1369 aa10.48□□□□□ -0.73
TCF4-233ENST00000566376 ZNF644Q9H582 1327 aaPredicted RBP10.46□□□□□ -0.73
TCF4-233ENST00000566376 PLEKHH2Q8IVE3 1493 aa10.46□□□□□ -0.74
TCF4-233ENST00000566376 DNMT1P26358 1616 aaKnown RBP10.45□□□□□ -0.74
TCF4-233ENST00000566376 PTPN23Q9H3S7 1636 aa10.45□□□□□ -0.74
TCF4-233ENST00000566376 CCDC141Q6ZP82 1450 aa10.45□□□□□ -0.74
TCF4-233ENST00000566376 EIF2AK4Q9P2K8 1649 aaKnown RBP10.44□□□□□ -0.74
TCF4-233ENST00000566376 CCNB3Q8WWL7 1395 aa10.44□□□□□ -0.74
TCF4-233ENST00000566376 CFAP65Q6ZU64 1925 aaKnown RBP10.44□□□□□ -0.74
TCF4-233ENST00000566376 DEPDC5O75140 1603 aa10.44□□□□□ -0.74
TCF4-233ENST00000566376 KANK4Q5T7N3 995 aaPredicted RBP10.43□□□□□ -0.74
TCF4-233ENST00000566376 ILDR1Q86SU0 546 aaPredicted RBP10.43□□□□□ -0.74
TCF4-233ENST00000566376 A2MP01023 1474 aa10.42□□□□□ -0.74
TCF4-233ENST00000566376 POLR1AO95602 1720 aaPredicted RBP10.42□□□□□ -0.74
TCF4-233ENST00000566376 ZC3H13Q5T200 1668 aaKnown RBP10.42□□□□□ -0.74
TCF4-233ENST00000566376 CABP2Q9NPB3 220 aa10.42□□□□□ -0.74
TCF4-233ENST00000566376 HCSTQ9UBK5 93 aa10.42□□□□□ -0.74
TCF4-233ENST00000566376 HNRNPMP52272 730 aaKnown RBP eCLIP10.41□□□□□ -0.747e-6■■■□□ 17
TCF4-233ENST00000566376 LSM11P83369 360 aaKnown RBP eCLIP10.41□□□□□ -0.74
TCF4-233ENST00000566376 ZSWIM6Q9HCJ5 1215 aa10.41□□□□□ -0.74
TCF4-233ENST00000566376 MYOM3Q5VTT5 1437 aa10.41□□□□□ -0.74
TCF4-233ENST00000566376 CAMSAP1Q5T5Y3 1602 aa10.4□□□□□ -0.74
TCF4-233ENST00000566376 ARID4BQ4LE39 1312 aaPredicted RBP10.39□□□□□ -0.75
TCF4-233ENST00000566376 TCOF1Q13428 1488 aaKnown RBP10.39□□□□□ -0.75
TCF4-233ENST00000566376 CHRM1P11229 460 aaPredicted RBP10.39□□□□□ -0.75
TCF4-233ENST00000566376 MLECQ14165 292 aa10.39□□□□□ -0.75
TCF4-233ENST00000566376 GPR153Q6NV75 609 aa10.39□□□□□ -0.75
TCF4-233ENST00000566376 RTEL1-TNFRSF6BF6WH68 1400 aa10.39□□□□□ -0.75
TCF4-233ENST00000566376 ZNF777Q9ULD5 760 aaPredicted RBP10.38□□□□□ -0.75
TCF4-233ENST00000566376 CEP170BQ9Y4F5 1589 aaPredicted RBP10.38□□□□□ -0.75
TCF4-233ENST00000566376 PRDM15P57071 1507 aaPredicted RBP10.38□□□□□ -0.75
TCF4-233ENST00000566376 CFDP1Q9UEE9 299 aaPredicted RBP10.37□□□□□ -0.75
TCF4-233ENST00000566376 KDM5DQ9BY66 1539 aa10.37□□□□□ -0.75
TCF4-233ENST00000566376 FAM135AQ9P2D6 1515 aa10.37□□□□□ -0.75
TCF4-233ENST00000566376 SHANK2Q9UPX8 1470 aa10.36□□□□□ -0.75
TCF4-233ENST00000566376 MIA2Q96PC5 1412 aa10.36□□□□□ -0.75
TCF4-233ENST00000566376 MYO5BQ9ULV0 1848 aa10.36□□□□□ -0.75
TCF4-233ENST00000566376 ARSIQ5FYB1 569 aa10.36□□□□□ -0.75
TCF4-233ENST00000566376 SPAG9O60271 1321 aaKnown RBP10.35□□□□□ -0.75
TCF4-233ENST00000566376 NEURL4Q96JN8 1562 aa10.35□□□□□ -0.75
TCF4-233ENST00000566376 ABCC3O15438 1527 aa10.35□□□□□ -0.75
TCF4-233ENST00000566376 CEBPAP49715 358 aaPredicted RBP10.35□□□□□ -0.75
TCF4-233ENST00000566376 PTPRKQ15262 1439 aa10.34□□□□□ -0.75
TCF4-233ENST00000566376 FGD6Q6ZV73 1430 aa10.34□□□□□ -0.75
TCF4-233ENST00000566376 UBR1Q8IWV7 1749 aa10.34□□□□□ -0.75
TCF4-233ENST00000566376 PDAP1Q13442 181 aaKnown RBP10.34□□□□□ -0.75
TCF4-233ENST00000566376 VWDEQ8N2E2 1590 aa10.34□□□□□ -0.75
TCF4-233ENST00000566376 RIOK3O14730 519 aaKnown RBP10.33□□□□□ -0.76
TCF4-233ENST00000566376 RGL2O15211 777 aa10.33□□□□□ -0.76
TCF4-233ENST00000566376 HSPA2P54652 639 aa10.33□□□□□ -0.76
TCF4-233ENST00000566376 STRCP1A6NGW2 1772 aa10.33□□□□□ -0.76
TCF4-233ENST00000566376 ABCC5O15440 1437 aa10.33□□□□□ -0.76
TCF4-233ENST00000566376 NPATQ14207 1427 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms