RNA–Protein interactions for RNA: ENST00000566108.2

TNRC6A-211, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 3

Gene TNRC6A, Length 454 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-211ENST00000566108 CHGAP10645 457 aaKnown RBP19.56■□□□□ 0.72
TNRC6A-211ENST00000566108 STRCP1A6NGW2 1772 aa19.56■□□□□ 0.72
TNRC6A-211ENST00000566108 RRBP1Q9P2E9 1410 aaKnown RBP19.55■□□□□ 0.72
TNRC6A-211ENST00000566108 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.54■□□□□ 0.72
TNRC6A-211ENST00000566108 MYO5BQ9ULV0 1848 aa19.52■□□□□ 0.72
TNRC6A-211ENST00000566108 RIMS2Q9UQ26 1411 aa19.51■□□□□ 0.71
TNRC6A-211ENST00000566108 SLC26A8Q96RN1 970 aa19.51■□□□□ 0.71
TNRC6A-211ENST00000566108 TMEM131LA2VDJ0 1609 aa19.51■□□□□ 0.71
TNRC6A-211ENST00000566108 KCNA6P17658 529 aa19.49■□□□□ 0.71
TNRC6A-211ENST00000566108 PLEKHG1Q9ULL1 1385 aa19.48■□□□□ 0.71
TNRC6A-211ENST00000566108 HSPA1LP34931 641 aa19.48■□□□□ 0.71
TNRC6A-211ENST00000566108 ZFYVE9O95405 1425 aa19.47■□□□□ 0.71
TNRC6A-211ENST00000566108 NKTRP30414 1462 aaKnown RBP19.47■□□□□ 0.71
TNRC6A-211ENST00000566108 SPHKAPQ2M3C7 1700 aa19.46■□□□□ 0.71
TNRC6A-211ENST00000566108 PROSER2Q86WR7 435 aaPredicted RBP19.46■□□□□ 0.71
TNRC6A-211ENST00000566108 TMEM94Q12767 1356 aa19.44■□□□□ 0.7
TNRC6A-211ENST00000566108 NWD1Q149M9 1564 aa19.43■□□□□ 0.7
TNRC6A-211ENST00000566108 NAIPQ13075 1403 aa19.42■□□□□ 0.7
TNRC6A-211ENST00000566108 XIRP1Q702N8 1843 aaKnown RBP19.42■□□□□ 0.7
TNRC6A-211ENST00000566108 DIP2AQ14689 1571 aa19.42■□□□□ 0.7
TNRC6A-211ENST00000566108 TRIM52Q96A61 297 aa19.42■□□□□ 0.7
TNRC6A-211ENST00000566108 ZNF326Q5BKZ1 582 aaKnown RBP19.41■□□□□ 0.7
TNRC6A-211ENST00000566108 MSH6P52701 1360 aa19.41■□□□□ 0.7
TNRC6A-211ENST00000566108 HFM1A2PYH4 1435 aa19.41■□□□□ 0.7
TNRC6A-211ENST00000566108 ALKQ9UM73 1620 aa19.4■□□□□ 0.7
TNRC6A-211ENST00000566108 TBX22Q9Y458 520 aa19.4■□□□□ 0.7
TNRC6A-211ENST00000566108 MSH5O43196 834 aa19.39■□□□□ 0.69
TNRC6A-211ENST00000566108 CHD2O14647 1828 aaKnown RBP19.39■□□□□ 0.69
TNRC6A-211ENST00000566108 NUTM2DQ5VT03 806 aaPredicted RBP19.38■□□□□ 0.69
TNRC6A-211ENST00000566108 C14orf37Q86TY3 774 aa19.38■□□□□ 0.69
TNRC6A-211ENST00000566108 TRPM2O94759 1503 aa19.36■□□□□ 0.69
TNRC6A-211ENST00000566108 PIK3R4Q99570 1358 aa19.36■□□□□ 0.69
TNRC6A-211ENST00000566108 KIF1BO60333 1816 aa19.36■□□□□ 0.69
TNRC6A-211ENST00000566108 MED1Q15648 1581 aaPredicted RBP19.35■□□□□ 0.69
TNRC6A-211ENST00000566108 SLC4A1APQ9BWU0 796 aaKnown RBP19.34■□□□□ 0.69
TNRC6A-211ENST00000566108 FAM135BQ49AJ0 1406 aa19.34■□□□□ 0.69
TNRC6A-211ENST00000566108 RBM33Q96EV2 1170 aaKnown RBP19.32■□□□□ 0.68
TNRC6A-211ENST00000566108 ADAMTS13Q76LX8 1427 aa19.32■□□□□ 0.68
TNRC6A-211ENST00000566108 NCOA3Q9Y6Q9 1424 aa19.32■□□□□ 0.68
TNRC6A-211ENST00000566108 ILDR2Q71H61 639 aa19.31■□□□□ 0.68
TNRC6A-211ENST00000566108 CLTCL1P53675 1640 aa19.31■□□□□ 0.68
TNRC6A-211ENST00000566108 ACIN1Q9UKV3 1341 aaKnown RBP19.3■□□□□ 0.68
TNRC6A-211ENST00000566108 ROBO1Q9Y6N7 1651 aa19.3■□□□□ 0.68
TNRC6A-211ENST00000566108 SETBP1Q9Y6X0 1596 aa19.28■□□□□ 0.68
TNRC6A-211ENST00000566108 SOCS7O14512 581 aa19.28■□□□□ 0.68
TNRC6A-211ENST00000566108 ATF3P18847 181 aa19.27■□□□□ 0.68
TNRC6A-211ENST00000566108 SLAIN2Q9P270 581 aa19.27■□□□□ 0.68
TNRC6A-211ENST00000566108 CADPS2Q86UW7 1296 aa19.26■□□□□ 0.67
TNRC6A-211ENST00000566108 AMOTL2Q9Y2J4 779 aa19.26■□□□□ 0.67
TNRC6A-211ENST00000566108 C19orf44Q9H6X5 657 aa19.25■□□□□ 0.67
TNRC6A-211ENST00000566108 NEXMIFQ5QGS0 1516 aa19.25■□□□□ 0.67
TNRC6A-211ENST00000566108 VGFO15240 615 aaPredicted RBP19.24■□□□□ 0.67
TNRC6A-211ENST00000566108 RPGRIP1LQ68CZ1 1315 aa19.24■□□□□ 0.67
TNRC6A-211ENST00000566108 NRXN3Q9Y4C0 1643 aa19.22■□□□□ 0.67
TNRC6A-211ENST00000566108 CCDC144AA2RUR9 1427 aa19.21■□□□□ 0.67
TNRC6A-211ENST00000566108 PHLPP1O60346 1717 aa19.21■□□□□ 0.67
TNRC6A-211ENST00000566108 XRN1Q8IZH2 1706 aaKnown RBP19.2■□□□□ 0.66
TNRC6A-211ENST00000566108 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.2■□□□□ 0.66
TNRC6A-211ENST00000566108 DCCP43146 1447 aa19.18■□□□□ 0.66
TNRC6A-211ENST00000566108 PTPRUQ92729 1446 aa19.18■□□□□ 0.66
TNRC6A-211ENST00000566108 MPHOSPH9Q99550 1183 aa19.16■□□□□ 0.66
TNRC6A-211ENST00000566108 METP08581 1390 aa19.16■□□□□ 0.66
TNRC6A-211ENST00000566108 PPLO60437 1756 aa19.15■□□□□ 0.66
TNRC6A-211ENST00000566108 JCADQ9P266 1359 aa19.15■□□□□ 0.66
TNRC6A-211ENST00000566108 SETD5Q9C0A6 1442 aa19.15■□□□□ 0.66
TNRC6A-211ENST00000566108 ADGRL3Q9HAR2 1447 aa19.11■□□□□ 0.65
TNRC6A-211ENST00000566108 PTCH1Q13635 1447 aa19.1■□□□□ 0.65
TNRC6A-211ENST00000566108 ANKRD30BQ9BXX2 1392 aa19.1■□□□□ 0.65
TNRC6A-211ENST00000566108 AHDC1Q5TGY3 1603 aaPredicted RBP19.1■□□□□ 0.65
TNRC6A-211ENST00000566108 RGL3Q3MIN7 710 aa19.09■□□□□ 0.65
TNRC6A-211ENST00000566108 COL16A1Q07092 1604 aaPredicted RBP19.09■□□□□ 0.65
TNRC6A-211ENST00000566108 MEX3CQ5U5Q3 659 aaKnown RBP19.07■□□□□ 0.64
TNRC6A-211ENST00000566108 BRINP3Q76B58 766 aa19.07■□□□□ 0.64
TNRC6A-211ENST00000566108 SETD1AO15047 1707 aaKnown RBP19.07■□□□□ 0.64
TNRC6A-211ENST00000566108 SPATA31A6Q5VVP1 1343 aa19.06■□□□□ 0.64
TNRC6A-211ENST00000566108 NALCNQ8IZF0 1738 aa19.06■□□□□ 0.64
TNRC6A-211ENST00000566108 ASXL1Q8IXJ9 1541 aa19.05■□□□□ 0.64
TNRC6A-211ENST00000566108 MST1RQ04912 1400 aa19.05■□□□□ 0.64
TNRC6A-211ENST00000566108 RAB3GAP2Q9H2M9 1393 aa19.05■□□□□ 0.64
TNRC6A-211ENST00000566108 SPATA31E1Q6ZUB1 1445 aa19.04■□□□□ 0.64
TNRC6A-211ENST00000566108 PRAG1Q86YV5 1406 aa19.03■□□□□ 0.64
TNRC6A-211ENST00000566108 SHPRHQ149N8 1683 aa19.03■□□□□ 0.64
TNRC6A-211ENST00000566108 IFT172Q9UG01 1749 aa19.03■□□□□ 0.64
TNRC6A-211ENST00000566108 ROBO2Q9HCK4 1378 aa19.02■□□□□ 0.64
TNRC6A-211ENST00000566108 ADGRF5Q8IZF2 1346 aa19■□□□□ 0.63
TNRC6A-211ENST00000566108 LRRC59Q96AG4 307 aaKnown RBP19■□□□□ 0.63
TNRC6A-211ENST00000566108 NHSL1Q5SYE7 1610 aa19■□□□□ 0.63
TNRC6A-211ENST00000566108 C1orf167Q5SNV9 1468 aa18.97■□□□□ 0.63
TNRC6A-211ENST00000566108 STK26Q9P289 416 aa18.97■□□□□ 0.63
TNRC6A-211ENST00000566108 RGS17Q9UGC6 210 aaPredicted RBP18.97■□□□□ 0.63
TNRC6A-211ENST00000566108 PIK3C2GO75747 1445 aa18.97■□□□□ 0.63
TNRC6A-211ENST00000566108 LAMC1P11047 1609 aa18.96■□□□□ 0.63
TNRC6A-211ENST00000566108 LRPPRCP42704 1394 aaKnown RBP18.96■□□□□ 0.63
TNRC6A-211ENST00000566108 ZNF772Q68DY9 489 aaPredicted RBP18.96■□□□□ 0.63
TNRC6A-211ENST00000566108 CDC42BPGQ6DT37 1551 aa18.95■□□□□ 0.62
TNRC6A-211ENST00000566108 NUTM2BA6NNL0 878 aaPredicted RBP18.95■□□□□ 0.62
TNRC6A-211ENST00000566108 NUTM2EB1AL46 878 aaPredicted RBP18.95■□□□□ 0.62
TNRC6A-211ENST00000566108 NUTM2AQ8IVF1 878 aaPredicted RBP18.95■□□□□ 0.62
TNRC6A-211ENST00000566108 KNDC1Q76NI1 1749 aa18.94■□□□□ 0.62
TNRC6A-211ENST00000566108 TECPR2O15040 1411 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms