RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 FHOD3Q2V2M9 1422 aa10.24□□□□□ -0.77
UBFD1-204ENST00000565634 GOLGA3Q08378 1498 aa10.24□□□□□ -0.77
UBFD1-204ENST00000565634 ARHGEF12Q9NZN5 1544 aa10.24□□□□□ -0.77
UBFD1-204ENST00000565634 FAM9AQ8IZU1 332 aaPredicted RBP10.24□□□□□ -0.77
UBFD1-204ENST00000565634 TAOK2Q9UL54 1235 aa10.24□□□□□ -0.77
UBFD1-204ENST00000565634 PLEKHD1A6NEE1 506 aa10.23□□□□□ -0.77
UBFD1-204ENST00000565634 STK25O00506 426 aa10.23□□□□□ -0.77
UBFD1-204ENST00000565634 SCAPERQ9BY12 1400 aa10.23□□□□□ -0.77
UBFD1-204ENST00000565634 EFCAB5A4FU69 1503 aa10.23□□□□□ -0.77
UBFD1-204ENST00000565634 RGS17Q9UGC6 210 aaPredicted RBP10.22□□□□□ -0.77
UBFD1-204ENST00000565634 ATP10AO60312 1499 aa10.22□□□□□ -0.77
UBFD1-204ENST00000565634 AFAP1Q8N556 730 aa10.21□□□□□ -0.77
UBFD1-204ENST00000565634 CAMSAP1Q5T5Y3 1602 aa10.21□□□□□ -0.78
UBFD1-204ENST00000565634 ERBB3P21860 1342 aa10.2□□□□□ -0.78
UBFD1-204ENST00000565634 NCOA1Q15788 1441 aa10.2□□□□□ -0.78
UBFD1-204ENST00000565634 IQSEC2Q5JU85 1478 aa10.2□□□□□ -0.78
UBFD1-204ENST00000565634 GPR153Q6NV75 609 aa10.2□□□□□ -0.78
UBFD1-204ENST00000565634 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.2□□□□□ -0.78
UBFD1-204ENST00000565634 RAPGEF6Q8TEU7 1601 aa10.2□□□□□ -0.78
UBFD1-204ENST00000565634 SUPT6HQ7KZ85 1726 aaKnown RBP10.19□□□□□ -0.78
UBFD1-204ENST00000565634 ZMYM4Q5VZL5 1548 aa10.19□□□□□ -0.78
UBFD1-204ENST00000565634 RIMBP2O15034 1052 aa10.19□□□□□ -0.78
UBFD1-204ENST00000565634 ESF1Q9H501 851 aaKnown RBP10.19□□□□□ -0.78
UBFD1-204ENST00000565634 ZSWIM6Q9HCJ5 1215 aa10.18□□□□□ -0.78
UBFD1-204ENST00000565634 C9orf84Q5VXU9 1444 aa10.17□□□□□ -0.78
UBFD1-204ENST00000565634 TOM1O60784 492 aa10.16□□□□□ -0.78
UBFD1-204ENST00000565634 VARS2Q5ST30 1063 aaKnown RBP10.16□□□□□ -0.78
UBFD1-204ENST00000565634 TRAPPC8Q9Y2L5 1435 aa10.16□□□□□ -0.78
UBFD1-204ENST00000565634 POTEAQ6S8J7 498 aa10.15□□□□□ -0.78
UBFD1-204ENST00000565634 ATP1B4Q9UN42 357 aaPredicted RBP10.15□□□□□ -0.78
UBFD1-204ENST00000565634 NUP153P49790 1475 aaKnown RBP10.15□□□□□ -0.78
UBFD1-204ENST00000565634 MAGI2Q86UL8 1455 aa10.15□□□□□ -0.78
UBFD1-204ENST00000565634 KIF3CO14782 793 aa10.14□□□□□ -0.79
UBFD1-204ENST00000565634 ARSIQ5FYB1 569 aa10.14□□□□□ -0.79
UBFD1-204ENST00000565634 CFAP74Q9C0B2 1584 aa10.14□□□□□ -0.79
UBFD1-204ENST00000565634 KHSRPQ92945 711 aaKnown RBP eCLIP10.13□□□□□ -0.79
UBFD1-204ENST00000565634 SETD1AO15047 1707 aaKnown RBP10.13□□□□□ -0.79
UBFD1-204ENST00000565634 C2orf72A6NCS6 295 aa10.11□□□□□ -0.79
UBFD1-204ENST00000565634 LOC105371045A0A1W2PR82 267 aa10.1□□□□□ -0.79
UBFD1-204ENST00000565634 PPP1R37O75864 691 aa10.1□□□□□ -0.79
UBFD1-204ENST00000565634 EFCAB2Q5VUJ9 269 aa10.1□□□□□ -0.79
UBFD1-204ENST00000565634 PLCH2O75038 1416 aa10.09□□□□□ -0.79
UBFD1-204ENST00000565634 ZNF687Q8N1G0 1237 aa10.09□□□□□ -0.79
UBFD1-204ENST00000565634 CDK13Q14004 1512 aaKnown RBP10.08□□□□□ -0.8
UBFD1-204ENST00000565634 ZMYM3Q14202 1370 aa10.08□□□□□ -0.8
UBFD1-204ENST00000565634 DIP2CQ9Y2E4 1556 aa10.08□□□□□ -0.8
UBFD1-204ENST00000565634 ABCA6Q8N139 1617 aa10.07□□□□□ -0.8
UBFD1-204ENST00000565634 ALKQ9UM73 1620 aa10.07□□□□□ -0.8
UBFD1-204ENST00000565634 MYO5CQ9NQX4 1742 aa10.06□□□□□ -0.8
UBFD1-204ENST00000565634 SAMD9Q5K651 1589 aa10.05□□□□□ -0.8
UBFD1-204ENST00000565634 CLTCQ00610 1675 aaKnown RBP10.05□□□□□ -0.8
UBFD1-204ENST00000565634 PRXQ9BXM0 1461 aa10.04□□□□□ -0.8
UBFD1-204ENST00000565634 ZNF316A6NFI3 1004 aaPredicted RBP10.03□□□□□ -0.8
UBFD1-204ENST00000565634 GGT6Q6P531 493 aa10.03□□□□□ -0.8
UBFD1-204ENST00000565634 STRCP1A6NGW2 1772 aa10.03□□□□□ -0.8
UBFD1-204ENST00000565634 SHANK2Q9UPX8 1470 aa10.03□□□□□ -0.8
UBFD1-204ENST00000565634 PLCB2Q00722 1185 aa10.02□□□□□ -0.81
UBFD1-204ENST00000565634 KIF14Q15058 1648 aa10.02□□□□□ -0.81
UBFD1-204ENST00000565634 MYO3AQ8NEV4 1616 aa10.02□□□□□ -0.81
UBFD1-204ENST00000565634 TCOF1Q13428 1488 aaKnown RBP10.01□□□□□ -0.81
UBFD1-204ENST00000565634 ZNF518AQ6AHZ1 1483 aa10.01□□□□□ -0.81
UBFD1-204ENST00000565634 CDC42BPBQ9Y5S2 1711 aa10.01□□□□□ -0.81
UBFD1-204ENST00000565634 ARHGAP5Q13017 1502 aa10.01□□□□□ -0.81
UBFD1-204ENST00000565634 KIDINS220Q9ULH0 1771 aa10.01□□□□□ -0.81
UBFD1-204ENST00000565634 CEP170BQ9Y4F5 1589 aaPredicted RBP10.01□□□□□ -0.81
UBFD1-204ENST00000565634 CFAP65Q6ZU64 1925 aaKnown RBP10□□□□□ -0.81
UBFD1-204ENST00000565634 SLC34A2O95436 690 aa10□□□□□ -0.81
UBFD1-204ENST00000565634 NUDT7P0C024 238 aa10□□□□□ -0.81
UBFD1-204ENST00000565634 FBXO31Q5XUX0 539 aaPredicted RBP10□□□□□ -0.81
UBFD1-204ENST00000565634 HS6ST3Q8IZP7 471 aa10□□□□□ -0.81
UBFD1-204ENST00000565634 TMC2Q8TDI7 906 aa10□□□□□ -0.81
UBFD1-204ENST00000565634 UPF1Q92900 1129 aaKnown RBP eCLIP10□□□□□ -0.81
UBFD1-204ENST00000565634 TRIM52Q96A61 297 aa9.99□□□□□ -0.81
UBFD1-204ENST00000565634 ZNF777Q9ULD5 760 aaPredicted RBP9.99□□□□□ -0.81
UBFD1-204ENST00000565634 PCDHGA4Q9Y5G9 962 aa9.99□□□□□ -0.81
UBFD1-204ENST00000565634 KDM5CP41229 1560 aa9.99□□□□□ -0.81
UBFD1-204ENST00000565634 POLR1AO95602 1720 aaPredicted RBP9.99□□□□□ -0.81
UBFD1-204ENST00000565634 DNMT1P26358 1616 aaKnown RBP9.98□□□□□ -0.81
UBFD1-204ENST00000565634 ZNF142P52746 1687 aaPredicted RBP9.98□□□□□ -0.81
UBFD1-204ENST00000565634 NPATQ14207 1427 aa9.98□□□□□ -0.81
UBFD1-204ENST00000565634 PTPRKQ15262 1439 aa9.98□□□□□ -0.81
UBFD1-204ENST00000565634 PLA2R1Q13018 1463 aa9.98□□□□□ -0.81
UBFD1-204ENST00000565634 AGLP35573 1532 aa9.97□□□□□ -0.81
UBFD1-204ENST00000565634 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.97□□□□□ -0.81
UBFD1-204ENST00000565634 CNTLNQ9NXG0 1405 aa9.97□□□□□ -0.81
UBFD1-204ENST00000565634 CPS1P31327 1500 aa9.97□□□□□ -0.81
UBFD1-204ENST00000565634 NEURL4Q96JN8 1562 aa9.97□□□□□ -0.81
UBFD1-204ENST00000565634 MROH2AA6NES4 1674 aa9.96□□□□□ -0.81
UBFD1-204ENST00000565634 HNRNPMP52272 730 aaKnown RBP eCLIP9.96□□□□□ -0.823e-6■■■■□ 21.2
UBFD1-204ENST00000565634 LHX6Q9UPM6 363 aa9.96□□□□□ -0.82
UBFD1-204ENST00000565634 VWDEQ8N2E2 1590 aa9.96□□□□□ -0.82
UBFD1-204ENST00000565634 ANKLE2Q86XL3 938 aa9.95□□□□□ -0.82
UBFD1-204ENST00000565634 RBM33Q96EV2 1170 aaKnown RBP9.95□□□□□ -0.82
UBFD1-204ENST00000565634 EEA1Q15075 1411 aa9.95□□□□□ -0.82
UBFD1-204ENST00000565634 MLH3Q9UHC1 1453 aa9.95□□□□□ -0.82
UBFD1-204ENST00000565634 REREQ9P2R6 1566 aa9.95□□□□□ -0.82
UBFD1-204ENST00000565634 CHGAP10645 457 aaKnown RBP9.94□□□□□ -0.82
UBFD1-204ENST00000565634 UBTFP17480 764 aaKnown RBP9.94□□□□□ -0.82
UBFD1-204ENST00000565634 POTEEQ6S8J3 1075 aa9.94□□□□□ -0.82
UBFD1-204ENST00000565634 ANKRD13DQ6ZTN6 518 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms