RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 EID1Q9Y6B2 187 aa38.54■■■■□ 3.76
NME3-208ENST00000565379 SLC52A1Q9NWF4 448 aa38.52■■■■□ 3.76
NME3-208ENST00000565379 MYO5BQ9ULV0 1848 aa38.5■■■■□ 3.75
NME3-208ENST00000565379 HSPA1LP34931 641 aa38.49■■■■□ 3.75
NME3-208ENST00000565379 LRRC7Q96NW7 1537 aa38.48■■■■□ 3.75
NME3-208ENST00000565379 SENP3Q9H4L4 574 aaPredicted RBP38.48■■■■□ 3.75
NME3-208ENST00000565379 TRIM52Q96A61 297 aa38.47■■■■□ 3.75
NME3-208ENST00000565379 ALKQ9UM73 1620 aa38.44■■■■□ 3.74
NME3-208ENST00000565379 TMEM131LA2VDJ0 1609 aa38.43■■■■□ 3.74
NME3-208ENST00000565379 PCGF6Q9BYE7 350 aa38.43■■■■□ 3.74
NME3-208ENST00000565379 ZFYVE9O95405 1425 aa38.4■■■■□ 3.74
NME3-208ENST00000565379 SLC26A8Q96RN1 970 aa38.4■■■■□ 3.74
NME3-208ENST00000565379 CHGAP10645 457 aaKnown RBP38.38■■■■□ 3.73
NME3-208ENST00000565379 RIMS2Q9UQ26 1411 aa38.37■■■■□ 3.73
NME3-208ENST00000565379 NUTM2DQ5VT03 806 aaPredicted RBP38.31■■■■□ 3.72
NME3-208ENST00000565379 SLC4A1APQ9BWU0 796 aaKnown RBP38.31■■■■□ 3.72
NME3-208ENST00000565379 XIRP1Q702N8 1843 aaKnown RBP38.3■■■■□ 3.72
NME3-208ENST00000565379 BCANQ96GW7 911 aa38.27■■■■□ 3.72
NME3-208ENST00000565379 MPHOSPH9Q99550 1183 aa38.26■■■■□ 3.72
NME3-208ENST00000565379 PLEKHG1Q9ULL1 1385 aa38.25■■■■□ 3.71
NME3-208ENST00000565379 SPHKAPQ2M3C7 1700 aa38.24■■■■□ 3.71
NME3-208ENST00000565379 PPP1R15AO75807 674 aaPredicted RBP38.24■■■■□ 3.71
NME3-208ENST00000565379 RBM33Q96EV2 1170 aaKnown RBP38.24■■■■□ 3.71
NME3-208ENST00000565379 KCNA6P17658 529 aa38.22■■■■□ 3.71
NME3-208ENST00000565379 MED1Q15648 1581 aaPredicted RBP38.19■■■■□ 3.7
NME3-208ENST00000565379 TMEM94Q12767 1356 aa38.19■■■■□ 3.7
NME3-208ENST00000565379 NWD1Q149M9 1564 aa38.18■■■■□ 3.7
NME3-208ENST00000565379 CLTCL1P53675 1640 aa38.14■■■■□ 3.7
NME3-208ENST00000565379 ADAMTS13Q76LX8 1427 aa38.13■■■■□ 3.7
NME3-208ENST00000565379 PROSER2Q86WR7 435 aaPredicted RBP38.12■■■■□ 3.69
NME3-208ENST00000565379 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.12■■■■□ 3.69
NME3-208ENST00000565379 HDGFP51858 240 aaKnown RBP38.11■■■■□ 3.69
NME3-208ENST00000565379 TRPM2O94759 1503 aa38.09■■■■□ 3.69
NME3-208ENST00000565379 NKTRP30414 1462 aaKnown RBP38.09■■■■□ 3.69
NME3-208ENST00000565379 CHD2O14647 1828 aaKnown RBP38.08■■■■□ 3.69
NME3-208ENST00000565379 TBX22Q9Y458 520 aa38.05■■■■□ 3.68
NME3-208ENST00000565379 PHF23Q9BUL5 403 aaPredicted RBP38.03■■■■□ 3.68
NME3-208ENST00000565379 ZNF326Q5BKZ1 582 aaKnown RBP38.01■■■■□ 3.68
NME3-208ENST00000565379 NRXN3Q9Y4C0 1643 aa38■■■■□ 3.67
NME3-208ENST00000565379 FOXD1Q16676 465 aa37.98■■■■□ 3.67
NME3-208ENST00000565379 DIP2AQ14689 1571 aa37.97■■■■□ 3.67
NME3-208ENST00000565379 FAM135BQ49AJ0 1406 aa37.96■■■■□ 3.67
NME3-208ENST00000565379 PTPRUQ92729 1446 aa37.96■■■■□ 3.67
NME3-208ENST00000565379 NEXMIFQ5QGS0 1516 aa37.96■■■■□ 3.67
NME3-208ENST00000565379 DHX57Q6P158 1386 aaKnown RBP37.94■■■■□ 3.66
NME3-208ENST00000565379 SETBP1Q9Y6X0 1596 aa37.91■■■■□ 3.66
NME3-208ENST00000565379 KIF1BO60333 1816 aa37.91■■■■□ 3.66
NME3-208ENST00000565379 ANKRD30BQ9BXX2 1392 aa37.9■■■■□ 3.66
NME3-208ENST00000565379 MSH6P52701 1360 aa37.88■■■■□ 3.65
NME3-208ENST00000565379 PIK3R4Q99570 1358 aa37.87■■■■□ 3.65
NME3-208ENST00000565379 CCDC144AA2RUR9 1427 aa37.87■■■■□ 3.65
NME3-208ENST00000565379 AMOTL2Q9Y2J4 779 aa37.85■■■■□ 3.65
NME3-208ENST00000565379 ROBO1Q9Y6N7 1651 aa37.85■■■■□ 3.65
NME3-208ENST00000565379 METP08581 1390 aa37.84■■■■□ 3.65
NME3-208ENST00000565379 XRN1Q8IZH2 1706 aaKnown RBP37.81■■■■□ 3.64
NME3-208ENST00000565379 C14orf37Q86TY3 774 aa37.78■■■■□ 3.64
NME3-208ENST00000565379 SLAIN2Q9P270 581 aa37.76■■■■□ 3.64
NME3-208ENST00000565379 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.74■■■■□ 3.63
NME3-208ENST00000565379 NCOA3Q9Y6Q9 1424 aa37.73■■■■□ 3.63
NME3-208ENST00000565379 RGS17Q9UGC6 210 aaPredicted RBP37.72■■■■□ 3.63
NME3-208ENST00000565379 CLSPNQ9HAW4 1339 aa37.7■■■■□ 3.63
NME3-208ENST00000565379 PPLO60437 1756 aa37.69■■■■□ 3.62
NME3-208ENST00000565379 SETD1AO15047 1707 aaKnown RBP37.68■■■■□ 3.62
NME3-208ENST00000565379 C19orf44Q9H6X5 657 aa37.66■■■■□ 3.62
NME3-208ENST00000565379 VGFO15240 615 aaPredicted RBP37.64■■■■□ 3.62
NME3-208ENST00000565379 RPGRIP1LQ68CZ1 1315 aa37.63■■■■□ 3.62
NME3-208ENST00000565379 SPATA31E1Q6ZUB1 1445 aa37.63■■■■□ 3.61
NME3-208ENST00000565379 RGL3Q3MIN7 710 aa37.62■■■■□ 3.61
NME3-208ENST00000565379 CCER1Q8TC90 406 aaPredicted RBP37.61■■■■□ 3.61
NME3-208ENST00000565379 ATF3P18847 181 aa37.6■■■■□ 3.61
NME3-208ENST00000565379 PHLPP1O60346 1717 aa37.6■■■■□ 3.61
NME3-208ENST00000565379 CADPS2Q86UW7 1296 aa37.59■■■■□ 3.61
NME3-208ENST00000565379 ADGRF5Q8IZF2 1346 aa37.59■■■■□ 3.61
NME3-208ENST00000565379 ROBO2Q9HCK4 1378 aa37.55■■■■□ 3.6
NME3-208ENST00000565379 NALCNQ8IZF0 1738 aa37.54■■■■□ 3.6
NME3-208ENST00000565379 COL16A1Q07092 1604 aaPredicted RBP37.53■■■■□ 3.6
NME3-208ENST00000565379 IFT172Q9UG01 1749 aa37.52■■■■□ 3.6
NME3-208ENST00000565379 JCADQ9P266 1359 aa37.52■■■■□ 3.6
NME3-208ENST00000565379 ADGRL3Q9HAR2 1447 aa37.52■■■■□ 3.6
NME3-208ENST00000565379 SIN3AQ96ST3 1273 aa37.51■■■■□ 3.6
NME3-208ENST00000565379 DCCP43146 1447 aa37.51■■■■□ 3.59
NME3-208ENST00000565379 MST1RQ04912 1400 aa37.5■■■■□ 3.59
NME3-208ENST00000565379 POTEAQ6S8J7 498 aa37.49■■■■□ 3.59
NME3-208ENST00000565379 BRINP3Q76B58 766 aa37.49■■■■□ 3.59
NME3-208ENST00000565379 PTCH1Q13635 1447 aa37.48■■■■□ 3.59
NME3-208ENST00000565379 STAC3Q96MF2 364 aa37.48■■■■□ 3.59
NME3-208ENST00000565379 NEUROD1Q13562 356 aa37.47■■■■□ 3.59
NME3-208ENST00000565379 AHDC1Q5TGY3 1603 aaPredicted RBP37.46■■■■□ 3.59
NME3-208ENST00000565379 ASXL1Q8IXJ9 1541 aa37.42■■■■□ 3.58
NME3-208ENST00000565379 PRAG1Q86YV5 1406 aa37.42■■■■□ 3.58
NME3-208ENST00000565379 PIK3C2GO75747 1445 aa37.38■■■■□ 3.57
NME3-208ENST00000565379 TMEM132EQ6IEE7 984 aa37.36■■■■□ 3.57
NME3-208ENST00000565379 DDX17Q92841 729 aaKnown RBP37.36■■■■□ 3.57
NME3-208ENST00000565379 STK26Q9P289 416 aa37.36■■■■□ 3.57
NME3-208ENST00000565379 TIMELESSQ9UNS1 1208 aa37.35■■■■□ 3.57
NME3-208ENST00000565379 SPATA31A6Q5VVP1 1343 aa37.35■■■■□ 3.57
NME3-208ENST00000565379 TONSLQ96HA7 1378 aa37.34■■■■□ 3.57
NME3-208ENST00000565379 MYOM2P54296 1465 aa37.33■■■■□ 3.57
NME3-208ENST00000565379 DCAF11Q8TEB1 546 aa37.33■■■■□ 3.57
NME3-208ENST00000565379 LRP6O75581 1613 aa37.32■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms