RNA–Protein interactions for RNA: ENST00000564948.1

CX3CL1-203, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 3 BASIC

Gene CX3CL1, Length 563 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-203ENST00000564948 PPP1R15AO75807 674 aaPredicted RBP22.93■■□□□ 1.26
CX3CL1-203ENST00000564948 RIMS2Q9UQ26 1411 aa22.92■■□□□ 1.26
CX3CL1-203ENST00000564948 CHGAP10645 457 aaKnown RBP22.92■■□□□ 1.26
CX3CL1-203ENST00000564948 KCNA6P17658 529 aa22.92■■□□□ 1.26
CX3CL1-203ENST00000564948 TMEM131LA2VDJ0 1609 aa22.92■■□□□ 1.26
CX3CL1-203ENST00000564948 PLEKHG1Q9ULL1 1385 aa22.91■■□□□ 1.26
CX3CL1-203ENST00000564948 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.9■■□□□ 1.26
CX3CL1-203ENST00000564948 TMEM94Q12767 1356 aa22.88■■□□□ 1.25
CX3CL1-203ENST00000564948 NKTRP30414 1462 aaKnown RBP22.87■■□□□ 1.25
CX3CL1-203ENST00000564948 ILDR2Q71H61 639 aa22.87■■□□□ 1.25
CX3CL1-203ENST00000564948 NWD1Q149M9 1564 aa22.86■■□□□ 1.25
CX3CL1-203ENST00000564948 PROSER2Q86WR7 435 aaPredicted RBP22.86■■□□□ 1.25
CX3CL1-203ENST00000564948 MYO5BQ9ULV0 1848 aa22.85■■□□□ 1.25
CX3CL1-203ENST00000564948 SENP3Q9H4L4 574 aaPredicted RBP22.83■■□□□ 1.25
CX3CL1-203ENST00000564948 NAIPQ13075 1403 aa22.82■■□□□ 1.24
CX3CL1-203ENST00000564948 XIRP1Q702N8 1843 aaKnown RBP22.82■■□□□ 1.24
CX3CL1-203ENST00000564948 TBX22Q9Y458 520 aa22.81■■□□□ 1.24
CX3CL1-203ENST00000564948 MED1Q15648 1581 aaPredicted RBP22.8■■□□□ 1.24
CX3CL1-203ENST00000564948 DIP2AQ14689 1571 aa22.78■■□□□ 1.24
CX3CL1-203ENST00000564948 SPHKAPQ2M3C7 1700 aa22.78■■□□□ 1.24
CX3CL1-203ENST00000564948 NUTM2DQ5VT03 806 aaPredicted RBP22.78■■□□□ 1.24
CX3CL1-203ENST00000564948 MSH6P52701 1360 aa22.77■■□□□ 1.24
CX3CL1-203ENST00000564948 HFM1A2PYH4 1435 aa22.76■■□□□ 1.23
CX3CL1-203ENST00000564948 FAM135BQ49AJ0 1406 aa22.76■■□□□ 1.23
CX3CL1-203ENST00000564948 ADAMTS13Q76LX8 1427 aa22.76■■□□□ 1.23
CX3CL1-203ENST00000564948 RBM33Q96EV2 1170 aaKnown RBP22.76■■□□□ 1.23
CX3CL1-203ENST00000564948 PIK3R4Q99570 1358 aa22.76■■□□□ 1.23
CX3CL1-203ENST00000564948 SOCS7O14512 581 aa22.75■■□□□ 1.23
CX3CL1-203ENST00000564948 CHD2O14647 1828 aaKnown RBP22.73■■□□□ 1.23
CX3CL1-203ENST00000564948 ZNF326Q5BKZ1 582 aaKnown RBP22.73■■□□□ 1.23
CX3CL1-203ENST00000564948 TRIM52Q96A61 297 aa22.72■■□□□ 1.23
CX3CL1-203ENST00000564948 TRPM2O94759 1503 aa22.72■■□□□ 1.23
CX3CL1-203ENST00000564948 NCOA3Q9Y6Q9 1424 aa22.71■■□□□ 1.23
CX3CL1-203ENST00000564948 PHF23Q9BUL5 403 aaPredicted RBP22.7■■□□□ 1.22
CX3CL1-203ENST00000564948 C14orf37Q86TY3 774 aa22.68■■□□□ 1.22
CX3CL1-203ENST00000564948 CLTCL1P53675 1640 aa22.68■■□□□ 1.22
CX3CL1-203ENST00000564948 ROBO1Q9Y6N7 1651 aa22.67■■□□□ 1.22
CX3CL1-203ENST00000564948 SLC4A1APQ9BWU0 796 aaKnown RBP22.66■■□□□ 1.22
CX3CL1-203ENST00000564948 SETBP1Q9Y6X0 1596 aa22.66■■□□□ 1.22
CX3CL1-203ENST00000564948 SLAIN2Q9P270 581 aa22.65■■□□□ 1.22
CX3CL1-203ENST00000564948 AMOTL2Q9Y2J4 779 aa22.64■■□□□ 1.21
CX3CL1-203ENST00000564948 PTPRUQ92729 1446 aa22.62■■□□□ 1.21
CX3CL1-203ENST00000564948 NEXMIFQ5QGS0 1516 aa22.62■■□□□ 1.21
CX3CL1-203ENST00000564948 NRXN3Q9Y4C0 1643 aa22.61■■□□□ 1.21
CX3CL1-203ENST00000564948 CADPS2Q86UW7 1296 aa22.61■■□□□ 1.21
CX3CL1-203ENST00000564948 C19orf44Q9H6X5 657 aa22.61■■□□□ 1.21
CX3CL1-203ENST00000564948 ATF3P18847 181 aa22.6■■□□□ 1.21
CX3CL1-203ENST00000564948 KIF1BO60333 1816 aa22.59■■□□□ 1.21
CX3CL1-203ENST00000564948 XRN1Q8IZH2 1706 aaKnown RBP22.57■■□□□ 1.2
CX3CL1-203ENST00000564948 METP08581 1390 aa22.56■■□□□ 1.2
CX3CL1-203ENST00000564948 VGFO15240 615 aaPredicted RBP22.56■■□□□ 1.2
CX3CL1-203ENST00000564948 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.55■■□□□ 1.2
CX3CL1-203ENST00000564948 RPGRIP1LQ68CZ1 1315 aa22.55■■□□□ 1.2
CX3CL1-203ENST00000564948 DCCP43146 1447 aa22.54■■□□□ 1.2
CX3CL1-203ENST00000564948 PHLPP1O60346 1717 aa22.53■■□□□ 1.2
CX3CL1-203ENST00000564948 JCADQ9P266 1359 aa22.51■■□□□ 1.19
CX3CL1-203ENST00000564948 ACIN1Q9UKV3 1341 aaKnown RBP22.51■■□□□ 1.19
CX3CL1-203ENST00000564948 CCDC144AA2RUR9 1427 aa22.49■■□□□ 1.19
CX3CL1-203ENST00000564948 FOXD1Q16676 465 aa22.49■■□□□ 1.19
CX3CL1-203ENST00000564948 MPHOSPH9Q99550 1183 aa22.48■■□□□ 1.19
CX3CL1-203ENST00000564948 COL16A1Q07092 1604 aaPredicted RBP22.47■■□□□ 1.19
CX3CL1-203ENST00000564948 AHDC1Q5TGY3 1603 aaPredicted RBP22.47■■□□□ 1.19
CX3CL1-203ENST00000564948 ADGRL3Q9HAR2 1447 aa22.47■■□□□ 1.19
CX3CL1-203ENST00000564948 PTCH1Q13635 1447 aa22.45■■□□□ 1.18
CX3CL1-203ENST00000564948 BRINP3Q76B58 766 aa22.44■■□□□ 1.18
CX3CL1-203ENST00000564948 RGS17Q9UGC6 210 aaPredicted RBP22.44■■□□□ 1.18
CX3CL1-203ENST00000564948 PPLO60437 1756 aa22.43■■□□□ 1.18
CX3CL1-203ENST00000564948 MST1RQ04912 1400 aa22.43■■□□□ 1.18
CX3CL1-203ENST00000564948 SETD5Q9C0A6 1442 aa22.43■■□□□ 1.18
CX3CL1-203ENST00000564948 SPATA31A6Q5VVP1 1343 aa22.41■■□□□ 1.18
CX3CL1-203ENST00000564948 SETD1AO15047 1707 aaKnown RBP22.41■■□□□ 1.18
CX3CL1-203ENST00000564948 ASXL1Q8IXJ9 1541 aa22.41■■□□□ 1.18
CX3CL1-203ENST00000564948 PRAG1Q86YV5 1406 aa22.4■■□□□ 1.18
CX3CL1-203ENST00000564948 SPATA31E1Q6ZUB1 1445 aa22.4■■□□□ 1.18
CX3CL1-203ENST00000564948 RGL3Q3MIN7 710 aa22.39■■□□□ 1.17
CX3CL1-203ENST00000564948 NALCNQ8IZF0 1738 aa22.39■■□□□ 1.17
CX3CL1-203ENST00000564948 ANKRD30BQ9BXX2 1392 aa22.38■■□□□ 1.17
CX3CL1-203ENST00000564948 ROBO2Q9HCK4 1378 aa22.38■■□□□ 1.17
CX3CL1-203ENST00000564948 ADGRF5Q8IZF2 1346 aa22.36■■□□□ 1.17
CX3CL1-203ENST00000564948 SHPRHQ149N8 1683 aa22.35■■□□□ 1.17
CX3CL1-203ENST00000564948 MEX3CQ5U5Q3 659 aaKnown RBP22.34■■□□□ 1.17
CX3CL1-203ENST00000564948 POTEAQ6S8J7 498 aa22.34■■□□□ 1.17
CX3CL1-203ENST00000564948 RAB3GAP2Q9H2M9 1393 aa22.34■■□□□ 1.17
CX3CL1-203ENST00000564948 LRP6O75581 1613 aa22.32■■□□□ 1.16
CX3CL1-203ENST00000564948 NHSL1Q5SYE7 1610 aa22.32■■□□□ 1.16
CX3CL1-203ENST00000564948 C1orf167Q5SNV9 1468 aa22.32■■□□□ 1.16
CX3CL1-203ENST00000564948 IFT172Q9UG01 1749 aa22.31■■□□□ 1.16
CX3CL1-203ENST00000564948 LRRC59Q96AG4 307 aaKnown RBP22.3■■□□□ 1.16
CX3CL1-203ENST00000564948 PIK3C2GO75747 1445 aa22.29■■□□□ 1.16
CX3CL1-203ENST00000564948 LRPPRCP42704 1394 aaKnown RBP22.27■■□□□ 1.16
CX3CL1-203ENST00000564948 TECPR2O15040 1411 aa22.27■■□□□ 1.16
CX3CL1-203ENST00000564948 NUTM2BA6NNL0 878 aaPredicted RBP22.26■■□□□ 1.15
CX3CL1-203ENST00000564948 NUTM2EB1AL46 878 aaPredicted RBP22.26■■□□□ 1.15
CX3CL1-203ENST00000564948 ZNF772Q68DY9 489 aaPredicted RBP22.26■■□□□ 1.15
CX3CL1-203ENST00000564948 NUTM2AQ8IVF1 878 aaPredicted RBP22.26■■□□□ 1.15
CX3CL1-203ENST00000564948 DDX17Q92841 729 aaKnown RBP22.26■■□□□ 1.15
CX3CL1-203ENST00000564948 STK26Q9P289 416 aa22.26■■□□□ 1.15
CX3CL1-203ENST00000564948 CDC42BPGQ6DT37 1551 aa22.25■■□□□ 1.15
CX3CL1-203ENST00000564948 ABCC11Q96J66 1382 aa22.25■■□□□ 1.15
CX3CL1-203ENST00000564948 MYOM2P54296 1465 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms