RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 NRXN1Q9ULB1 1477 aa35.03■■■■□ 3.2
LINC01003-201ENST00000564834 CLTCQ00610 1675 aaKnown RBP34.99■■■■□ 3.19
LINC01003-201ENST00000564834 RPGRIP1LQ68CZ1 1315 aa34.97■■■■□ 3.19
LINC01003-201ENST00000564834 CHGAP10645 457 aaKnown RBP34.97■■■■□ 3.19
LINC01003-201ENST00000564834 SLC52A1Q9NWF4 448 aa34.96■■■■□ 3.19
LINC01003-201ENST00000564834 ADGRF5Q8IZF2 1346 aa34.94■■■■□ 3.18
LINC01003-201ENST00000564834 SCAF11Q99590 1463 aaKnown RBP34.94■■■■□ 3.18
LINC01003-201ENST00000564834 ERVK-7P63135 1459 aa34.93■■■■□ 3.18
LINC01003-201ENST00000564834 TESK2Q96S53 571 aa34.9■■■■□ 3.18
LINC01003-201ENST00000564834 IDI1Q13907 227 aa34.88■■■■□ 3.17
LINC01003-201ENST00000564834 POLR3GLQ9BT43 218 aa34.88■■■■□ 3.17
LINC01003-201ENST00000564834 NEXMIFQ5QGS0 1516 aa34.87■■■■□ 3.17
LINC01003-201ENST00000564834 PIK3C2GO75747 1445 aa34.87■■■■□ 3.17
LINC01003-201ENST00000564834 MYO5BQ9ULV0 1848 aa34.87■■■■□ 3.17
LINC01003-201ENST00000564834 TMEM131LA2VDJ0 1609 aa34.86■■■■□ 3.17
LINC01003-201ENST00000564834 SETBP1Q9Y6X0 1596 aa34.85■■■■□ 3.17
LINC01003-201ENST00000564834 SPATA31D1Q6ZQQ2 1576 aa34.84■■■■□ 3.17
LINC01003-201ENST00000564834 EIF3AQ14152 1382 aaKnown RBP34.84■■■■□ 3.17
LINC01003-201ENST00000564834 CFAP70Q5T0N1 1121 aa34.83■■■■□ 3.17
LINC01003-201ENST00000564834 MLECQ14165 292 aa34.82■■■■□ 3.17
LINC01003-201ENST00000564834 FBXO31Q5XUX0 539 aaPredicted RBP34.81■■■■□ 3.16
LINC01003-201ENST00000564834 PRKRIP1Q9H875 184 aaPredicted RBP34.79■■■■□ 3.16
LINC01003-201ENST00000564834 DISP3Q9P2K9 1392 aa34.79■■■■□ 3.16
LINC01003-201ENST00000564834 TMF1P82094 1093 aa34.78■■■■□ 3.16
LINC01003-201ENST00000564834 ZFYVE9O95405 1425 aa34.76■■■■□ 3.16
LINC01003-201ENST00000564834 VGFO15240 615 aaPredicted RBP34.75■■■■□ 3.15
LINC01003-201ENST00000564834 C14orf93Q9H972 538 aaKnown RBP34.74■■■■□ 3.15
LINC01003-201ENST00000564834 ESF1Q9H501 851 aaKnown RBP34.73■■■■□ 3.15
LINC01003-201ENST00000564834 MYO3AQ8NEV4 1616 aa34.73■■■■□ 3.15
LINC01003-201ENST00000564834 ADGRB1O14514 1584 aa34.71■■■■□ 3.15
LINC01003-201ENST00000564834 ZMYM3Q14202 1370 aa34.7■■■■□ 3.14
LINC01003-201ENST00000564834 SLC24A1O60721 1099 aa34.65■■■■□ 3.14
LINC01003-201ENST00000564834 CDCA8Q53HL2 280 aa34.63■■■■□ 3.13
LINC01003-201ENST00000564834 SBNO2Q9Y2G9 1366 aa34.61■■■■□ 3.13
LINC01003-201ENST00000564834 A2ML1A8K2U0 1454 aa34.6■■■■□ 3.13
LINC01003-201ENST00000564834 NUTM2DQ5VT03 806 aaPredicted RBP34.59■■■■□ 3.13
LINC01003-201ENST00000564834 STAG3Q9UJ98 1225 aa34.59■■■■□ 3.13
LINC01003-201ENST00000564834 KDM5AP29375 1690 aaKnown RBP34.58■■■■□ 3.13
LINC01003-201ENST00000564834 KTN1Q86UP2 1357 aaKnown RBP34.56■■■■□ 3.12
LINC01003-201ENST00000564834 QRICH2Q9H0J4 1663 aa34.54■■■■□ 3.12
LINC01003-201ENST00000564834 CENPJQ9HC77 1338 aaPredicted RBP34.53■■■■□ 3.12
LINC01003-201ENST00000564834 ARHGEF28Q8N1W1 1705 aaKnown RBP34.52■■■■□ 3.12
LINC01003-201ENST00000564834 MYOM1P52179 1685 aa34.52■■■■□ 3.12
LINC01003-201ENST00000564834 TMEM132EQ6IEE7 984 aa34.51■■■■□ 3.12
LINC01003-201ENST00000564834 TNRQ92752 1358 aa34.51■■■■□ 3.11
LINC01003-201ENST00000564834 PER1O15534 1290 aaPredicted RBP34.5■■■■□ 3.11
LINC01003-201ENST00000564834 TRAK1Q9UPV9 953 aa34.49■■■■□ 3.11
LINC01003-201ENST00000564834 ASXL1Q8IXJ9 1541 aa34.49■■■■□ 3.11
LINC01003-201ENST00000564834 FER1L4A9Z1Z3 1794 aa34.49■■■■□ 3.11
LINC01003-201ENST00000564834 CCDC184Q52MB2 194 aa34.49■■■■□ 3.11
LINC01003-201ENST00000564834 MRS2Q9HD23 443 aa34.47■■■■□ 3.11
LINC01003-201ENST00000564834 RIMS2Q9UQ26 1411 aa34.47■■■■□ 3.11
LINC01003-201ENST00000564834 PANK3Q9H999 370 aa34.46■■■■□ 3.11
LINC01003-201ENST00000564834 RALBP1Q15311 655 aa34.45■■■■□ 3.11
LINC01003-201ENST00000564834 SCAF1Q9H7N4 1312 aaKnown RBP34.44■■■■□ 3.1
LINC01003-201ENST00000564834 ALKQ9UM73 1620 aa34.44■■■■□ 3.1
LINC01003-201ENST00000564834 C3P01024 1663 aa34.42■■■■□ 3.1
LINC01003-201ENST00000564834 UBR1Q8IWV7 1749 aa34.41■■■■□ 3.1
LINC01003-201ENST00000564834 PARD3Q8TEW0 1356 aa34.4■■■■□ 3.1
LINC01003-201ENST00000564834 CNGB1Q14028 1251 aaPredicted RBP34.4■■■■□ 3.1
LINC01003-201ENST00000564834 NLRP1Q9C000 1473 aa34.37■■■■□ 3.09
LINC01003-201ENST00000564834 SETD1AO15047 1707 aaKnown RBP34.37■■■■□ 3.09
LINC01003-201ENST00000564834 MYBBP1AQ9BQG0 1328 aaKnown RBP34.37■■■■□ 3.09
LINC01003-201ENST00000564834 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.36■■■■□ 3.09
LINC01003-201ENST00000564834 YTHDC2Q9H6S0 1430 aaKnown RBP34.34■■■■□ 3.09
LINC01003-201ENST00000564834 GTF3C3Q9Y5Q9 886 aa34.32■■■■□ 3.08
LINC01003-201ENST00000564834 NRXN3Q9Y4C0 1643 aa34.31■■■■□ 3.08
LINC01003-201ENST00000564834 BRD4O60885 1362 aaPredicted RBP34.31■■■■□ 3.08
LINC01003-201ENST00000564834 PTPRMP28827 1452 aa34.31■■■■□ 3.08
LINC01003-201ENST00000564834 HDGFP51858 240 aaKnown RBP34.3■■■■□ 3.08
LINC01003-201ENST00000564834 FAM9BQ8IZU0 186 aa34.28■■■■□ 3.08
LINC01003-201ENST00000564834 KNSTRNQ9Y448 316 aa34.28■■■■□ 3.08
LINC01003-201ENST00000564834 TMEM2Q9UHN6 1383 aa34.28■■■■□ 3.08
LINC01003-201ENST00000564834 CEBPAP49715 358 aaPredicted RBP34.26■■■■□ 3.08
LINC01003-201ENST00000564834 SENP3Q9H4L4 574 aaPredicted RBP34.26■■■■□ 3.08
LINC01003-201ENST00000564834 TULP4Q9NRJ4 1543 aa34.26■■■■□ 3.08
LINC01003-201ENST00000564834 HNRNPUQ00839 825 aaKnown RBP eCLIP34.26■■■■□ 3.07
LINC01003-201ENST00000564834 PUS7Q96PZ0 661 aaKnown RBP34.26■■■■□ 3.07
LINC01003-201ENST00000564834 STK26Q9P289 416 aa34.25■■■■□ 3.07
LINC01003-201ENST00000564834 TMC1Q8TDI8 760 aa34.24■■■■□ 3.07
LINC01003-201ENST00000564834 DLC1Q96QB1 1528 aa34.24■■■■□ 3.07
LINC01003-201ENST00000564834 EVC2Q86UK5 1308 aa34.24■■■■□ 3.07
LINC01003-201ENST00000564834 CC2D1BQ5T0F9 858 aaKnown RBP34.23■■■■□ 3.07
LINC01003-201ENST00000564834 NPC1L1Q9UHC9 1359 aa34.23■■■■□ 3.07
LINC01003-201ENST00000564834 NLRP13Q86W25 1043 aa34.23■■■■□ 3.07
LINC01003-201ENST00000564834 AMER1Q5JTC6 1135 aaPredicted RBP34.21■■■■□ 3.07
LINC01003-201ENST00000564834 LRPPRCP42704 1394 aaKnown RBP34.19■■■■□ 3.06
LINC01003-201ENST00000564834 PNISRQ8TF01 805 aaKnown RBP34.17■■■■□ 3.06
LINC01003-201ENST00000564834 PRAM1Q96QH2 718 aa34.16■■■■□ 3.06
LINC01003-201ENST00000564834 RIMS1Q86UR5 1692 aaKnown RBP34.14■■■■□ 3.06
LINC01003-201ENST00000564834 KNDC1Q76NI1 1749 aa34.14■■■■□ 3.06
LINC01003-201ENST00000564834 ABCC11Q96J66 1382 aa34.14■■■■□ 3.06
LINC01003-201ENST00000564834 POGKQ9P215 609 aa34.13■■■■□ 3.05
LINC01003-201ENST00000564834 SLIT1O75093 1534 aa34.13■■■■□ 3.05
LINC01003-201ENST00000564834 SAFB2Q14151 953 aaKnown RBP eCLIP34.12■■■■□ 3.05
LINC01003-201ENST00000564834 ARHGAP23Q9P227 1491 aa34.1■■■■□ 3.05
LINC01003-201ENST00000564834 ADAMTSL3P82987 1691 aa34.1■■■■□ 3.05
LINC01003-201ENST00000564834 PLEKHG1Q9ULL1 1385 aa34.1■■■■□ 3.05
LINC01003-201ENST00000564834 CARD14Q9BXL6 1004 aa34.08■■■■□ 3.05
LINC01003-201ENST00000564834 METP08581 1390 aa34.08■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms