RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 ABCA6Q8N139 1617 aa29.78■■■□□ 2.36
SPSB3-206ENST00000564709 KIAA1210Q9ULL0 1709 aa29.78■■■□□ 2.36
SPSB3-206ENST00000564709 PPRC1Q5VV67 1664 aaKnown RBP29.78■■■□□ 2.36
SPSB3-206ENST00000564709 EFCAB6Q5THR3 1501 aa29.77■■■□□ 2.36
SPSB3-206ENST00000564709 STAC3Q96MF2 364 aa29.77■■■□□ 2.36
SPSB3-206ENST00000564709 MROH2AA6NES4 1674 aa29.77■■■□□ 2.36
SPSB3-206ENST00000564709 MAP3K4Q9Y6R4 1608 aa29.77■■■□□ 2.36
SPSB3-206ENST00000564709 CFAP70Q5T0N1 1121 aa29.76■■■□□ 2.35
SPSB3-206ENST00000564709 EXOC6Q8TAG9 804 aa29.76■■■□□ 2.35
SPSB3-206ENST00000564709 PPP2R1AP30153 589 aa29.75■■■□□ 2.35
SPSB3-206ENST00000564709 AMER1Q5JTC6 1135 aaPredicted RBP29.75■■■□□ 2.35
SPSB3-206ENST00000564709 EIF3AQ14152 1382 aaKnown RBP29.75■■■□□ 2.35
SPSB3-206ENST00000564709 ADGRF5Q8IZF2 1346 aa29.75■■■□□ 2.35
SPSB3-206ENST00000564709 CDCA8Q53HL2 280 aa29.74■■■□□ 2.35
SPSB3-206ENST00000564709 ADAMTS8Q9UP79 889 aa29.74■■■□□ 2.35
SPSB3-206ENST00000564709 ZMYM4Q5VZL5 1548 aa29.74■■■□□ 2.35
SPSB3-206ENST00000564709 KDM5AP29375 1690 aaKnown RBP29.73■■■□□ 2.35
SPSB3-206ENST00000564709 INSRP06213 1382 aa29.72■■■□□ 2.35
SPSB3-206ENST00000564709 IFT172Q9UG01 1749 aa29.71■■■□□ 2.35
SPSB3-206ENST00000564709 NEURL4Q96JN8 1562 aa29.71■■■□□ 2.35
SPSB3-206ENST00000564709 ASXL1Q8IXJ9 1541 aa29.71■■■□□ 2.35
SPSB3-206ENST00000564709 MYOM2P54296 1465 aa29.7■■■□□ 2.35
SPSB3-206ENST00000564709 ZNF518AQ6AHZ1 1483 aa29.7■■■□□ 2.35
SPSB3-206ENST00000564709 CFAP65Q6ZU64 1925 aaKnown RBP29.69■■■□□ 2.34
SPSB3-206ENST00000564709 ERICH6Q7L0X2 663 aa29.66■■■□□ 2.34
SPSB3-206ENST00000564709 WDR43Q15061 677 aaKnown RBP eCLIP29.66■■■□□ 2.34
SPSB3-206ENST00000564709 PLIN1O60240 522 aa29.65■■■□□ 2.34
SPSB3-206ENST00000564709 ERVK-7P63135 1459 aa29.64■■■□□ 2.34
SPSB3-206ENST00000564709 NPM1P06748 294 aaKnown RBP eCLIP29.64■■■□□ 2.34
SPSB3-206ENST00000564709 CHGAP10645 457 aaKnown RBP29.64■■■□□ 2.34
SPSB3-206ENST00000564709 LMTK2Q8IWU2 1503 aa29.61■■■□□ 2.33
SPSB3-206ENST00000564709 NOS1P29475 1434 aa29.61■■■□□ 2.33
SPSB3-206ENST00000564709 CD109Q6YHK3 1445 aa29.6■■■□□ 2.33
SPSB3-206ENST00000564709 FRMPD1Q5SYB0 1578 aa29.6■■■□□ 2.33
SPSB3-206ENST00000564709 PLEKHH1Q9ULM0 1364 aa29.6■■■□□ 2.33
SPSB3-206ENST00000564709 POGZQ7Z3K3 1410 aa29.59■■■□□ 2.33
SPSB3-206ENST00000564709 GGT6Q6P531 493 aa29.59■■■□□ 2.33
SPSB3-206ENST00000564709 ADGRB3O60242 1522 aa29.59■■■□□ 2.33
SPSB3-206ENST00000564709 OSCARQ8IYS5 282 aa29.57■■■□□ 2.32
SPSB3-206ENST00000564709 PIK3C2GO75747 1445 aa29.57■■■□□ 2.32
SPSB3-206ENST00000564709 CFAP74Q9C0B2 1584 aa29.57■■■□□ 2.32
SPSB3-206ENST00000564709 NRXN1Q9ULB1 1477 aa29.57■■■□□ 2.32
SPSB3-206ENST00000564709 NPATQ14207 1427 aa29.56■■■□□ 2.32
SPSB3-206ENST00000564709 HECW2Q9P2P5 1572 aa29.55■■■□□ 2.32
SPSB3-206ENST00000564709 NPC1L1Q9UHC9 1359 aa29.53■■■□□ 2.32
SPSB3-206ENST00000564709 MYO3AQ8NEV4 1616 aa29.53■■■□□ 2.32
SPSB3-206ENST00000564709 CCDC146Q8IYE0 955 aa29.53■■■□□ 2.32
SPSB3-206ENST00000564709 CARD14Q9BXL6 1004 aa29.52■■■□□ 2.32
SPSB3-206ENST00000564709 CRBNQ96SW2 442 aa29.51■■■□□ 2.32
SPSB3-206ENST00000564709 PPLO60437 1756 aa29.51■■■□□ 2.31
SPSB3-206ENST00000564709 MLH3Q9UHC1 1453 aa29.5■■■□□ 2.31
SPSB3-206ENST00000564709 TRAK1Q9UPV9 953 aa29.49■■■□□ 2.31
SPSB3-206ENST00000564709 CENPJQ9HC77 1338 aaPredicted RBP29.47■■■□□ 2.31
SPSB3-206ENST00000564709 DUSP27Q5VZP5 1158 aa29.47■■■□□ 2.31
SPSB3-206ENST00000564709 ZNF521Q96K83 1311 aa29.47■■■□□ 2.31
SPSB3-206ENST00000564709 C20orf194Q5TEA3 1177 aa29.46■■■□□ 2.31
SPSB3-206ENST00000564709 SETBP1Q9Y6X0 1596 aa29.46■■■□□ 2.31
SPSB3-206ENST00000564709 QRICH2Q9H0J4 1663 aa29.45■■■□□ 2.3
SPSB3-206ENST00000564709 ABCC3O15438 1527 aa29.45■■■□□ 2.3
SPSB3-206ENST00000564709 SLC24A1O60721 1099 aa29.44■■■□□ 2.3
SPSB3-206ENST00000564709 TMEM132EQ6IEE7 984 aa29.44■■■□□ 2.3
SPSB3-206ENST00000564709 ZC3H13Q5T200 1668 aaKnown RBP29.44■■■□□ 2.3
SPSB3-206ENST00000564709 RAPGEF3O95398 923 aa29.43■■■□□ 2.3
SPSB3-206ENST00000564709 GOLGA2Q08379 1002 aa29.43■■■□□ 2.3
SPSB3-206ENST00000564709 SIGLEC1Q9BZZ2 1709 aa29.42■■■□□ 2.3
SPSB3-206ENST00000564709 CAMSAP1Q5T5Y3 1602 aa29.42■■■□□ 2.3
SPSB3-206ENST00000564709 SBNO2Q9Y2G9 1366 aa29.42■■■□□ 2.3
SPSB3-206ENST00000564709 NUTM2DQ5VT03 806 aaPredicted RBP29.4■■■□□ 2.3
SPSB3-206ENST00000564709 NOP58Q9Y2X3 529 aaKnown RBP29.4■■■□□ 2.3
SPSB3-206ENST00000564709 ADGRB1O14514 1584 aa29.4■■■□□ 2.3
SPSB3-206ENST00000564709 APAF1O14727 1248 aa29.39■■■□□ 2.3
SPSB3-206ENST00000564709 ANP32AP39687 249 aaKnown RBP29.39■■■□□ 2.3
SPSB3-206ENST00000564709 PAK3O75914 559 aaPredicted RBP29.39■■■□□ 2.3
SPSB3-206ENST00000564709 C14orf93Q9H972 538 aaKnown RBP29.39■■■□□ 2.3
SPSB3-206ENST00000564709 SKAP1Q86WV1 359 aa29.38■■■□□ 2.29
SPSB3-206ENST00000564709 TCERG1O14776 1098 aaKnown RBP29.37■■■□□ 2.29
SPSB3-206ENST00000564709 NSD3Q9BZ95 1437 aa29.37■■■□□ 2.29
SPSB3-206ENST00000564709 SLFN5Q08AF3 891 aa29.36■■■□□ 2.29
SPSB3-206ENST00000564709 SPINK5Q9NQ38 1064 aaPredicted RBP29.36■■■□□ 2.29
SPSB3-206ENST00000564709 SLC12A5Q9H2X9 1139 aa29.34■■■□□ 2.29
SPSB3-206ENST00000564709 TNNT2P45379 298 aaPredicted RBP29.33■■■□□ 2.29
SPSB3-206ENST00000564709 DIP2CQ9Y2E4 1556 aa29.33■■■□□ 2.29
SPSB3-206ENST00000564709 IPO9Q96P70 1041 aaKnown RBP29.31■■■□□ 2.28
SPSB3-206ENST00000564709 GLI2P10070 1586 aa29.31■■■□□ 2.28
SPSB3-206ENST00000564709 SENP3Q9H4L4 574 aaPredicted RBP29.31■■■□□ 2.28
SPSB3-206ENST00000564709 NPM2Q86SE8 214 aaKnown RBP29.3■■■□□ 2.28
SPSB3-206ENST00000564709 NEO1Q92859 1461 aa29.3■■■□□ 2.28
SPSB3-206ENST00000564709 PDE4AP27815 886 aa29.29■■■□□ 2.28
SPSB3-206ENST00000564709 PIK3C2BO00750 1634 aa29.29■■■□□ 2.28
SPSB3-206ENST00000564709 RPGRIP1LQ68CZ1 1315 aa29.29■■■□□ 2.28
SPSB3-206ENST00000564709 DMRT2Q9Y5R5 561 aa29.28■■■□□ 2.28
SPSB3-206ENST00000564709 MORC1Q86VD1 984 aa29.28■■■□□ 2.28
SPSB3-206ENST00000564709 TRMT2AQ8IZ69 625 aaKnown RBP29.27■■■□□ 2.28
SPSB3-206ENST00000564709 NEXMIFQ5QGS0 1516 aa29.27■■■□□ 2.28
SPSB3-206ENST00000564709 SHPRHQ149N8 1683 aa29.26■■■□□ 2.27
SPSB3-206ENST00000564709 POLR3AO14802 1390 aaPredicted RBP29.25■■■□□ 2.27
SPSB3-206ENST00000564709 RICTORQ6R327 1708 aa29.25■■■□□ 2.27
SPSB3-206ENST00000564709 ARHGEF28Q8N1W1 1705 aaKnown RBP29.25■■■□□ 2.27
SPSB3-206ENST00000564709 NKTRP30414 1462 aaKnown RBP29.25■■■□□ 2.27
SPSB3-206ENST00000564709 MS4A1P11836 297 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms