RNA–Protein interactions for RNA: ENST00000564674.5

DENND4A-206, Transcript of DENN domain containing 4A, humanhuman

TSL 1 (best)

Gene DENND4A, Length 3,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-206ENST00000564674 IFT140Q96RY7 1462 aa23.65■■□□□ 1.38
DENND4A-206ENST00000564674 USP19O94966 1318 aa23.63■■□□□ 1.37
DENND4A-206ENST00000564674 BECN1Q14457 450 aa23.63■■□□□ 1.37
DENND4A-206ENST00000564674 E9PSI1 815 aa23.63■■□□□ 1.37
DENND4A-206ENST00000564674 CFAP70Q5T0N1 1121 aa23.63■■□□□ 1.37
DENND4A-206ENST00000564674 E9PCH4 1651 aa23.62■■□□□ 1.37
DENND4A-206ENST00000564674 ABCC10Q5T3U5 1492 aa23.62■■□□□ 1.37
DENND4A-206ENST00000564674 PTPRGP23470 1445 aa23.61■■□□□ 1.37
DENND4A-206ENST00000564674 GPRASP1Q5JY77 1395 aa23.6■■□□□ 1.37
DENND4A-206ENST00000564674 CROCC2H7BZ55 1655 aa23.6■■□□□ 1.37
DENND4A-206ENST00000564674 CCDC141Q6ZP82 1450 aa23.6■■□□□ 1.37
DENND4A-206ENST00000564674 RLBP1P12271 317 aa23.6■■□□□ 1.37
DENND4A-206ENST00000564674 PCDHB15Q9Y5E8 787 aa23.6■■□□□ 1.37
DENND4A-206ENST00000564674 CDC42BPAQ5VT25 1732 aa23.59■■□□□ 1.37
DENND4A-206ENST00000564674 UPF2Q9HAU5 1272 aaKnown RBP23.59■■□□□ 1.37
DENND4A-206ENST00000564674 TRPM1Q7Z4N2 1603 aa23.59■■□□□ 1.37
DENND4A-206ENST00000564674 CDCA8Q53HL2 280 aa23.58■■□□□ 1.37
DENND4A-206ENST00000564674 WWC1Q8IX03 1113 aa23.58■■□□□ 1.36
DENND4A-206ENST00000564674 CARD14Q9BXL6 1004 aa23.57■■□□□ 1.36
DENND4A-206ENST00000564674 PDZRN3Q9UPQ7 1066 aa23.57■■□□□ 1.36
DENND4A-206ENST00000564674 MFAP1P55081 439 aaKnown RBP23.56■■□□□ 1.36
DENND4A-206ENST00000564674 AFAP1Q8N556 730 aa23.56■■□□□ 1.36
DENND4A-206ENST00000564674 WDR7Q9Y4E6 1490 aa23.56■■□□□ 1.36
DENND4A-206ENST00000564674 NKTRP30414 1462 aaKnown RBP23.55■■□□□ 1.36
DENND4A-206ENST00000564674 SHANK2Q9UPX8 1470 aa23.55■■□□□ 1.36
DENND4A-206ENST00000564674 CGNL1Q0VF96 1302 aa23.54■■□□□ 1.36
DENND4A-206ENST00000564674 RRAGDQ9NQL2 400 aaPredicted RBP23.54■■□□□ 1.36
DENND4A-206ENST00000564674 SYCP2Q9BX26 1530 aa23.53■■□□□ 1.36
DENND4A-206ENST00000564674 MORC1Q86VD1 984 aa23.53■■□□□ 1.36
DENND4A-206ENST00000564674 ARHGAP5Q13017 1502 aa23.53■■□□□ 1.36
DENND4A-206ENST00000564674 RSPH4AQ5TD94 716 aa23.53■■□□□ 1.36
DENND4A-206ENST00000564674 TBC1D2Q9BYX2 928 aa23.53■■□□□ 1.36
DENND4A-206ENST00000564674 TRMT2AQ8IZ69 625 aaKnown RBP23.52■■□□□ 1.36
DENND4A-206ENST00000564674 PANK2Q9BZ23 570 aa23.52■■□□□ 1.36
DENND4A-206ENST00000564674 EIF4G3O43432 1585 aaKnown RBP23.51■■□□□ 1.35
DENND4A-206ENST00000564674 TCP11L2Q8N4U5 519 aa23.51■■□□□ 1.35
DENND4A-206ENST00000564674 TRAK1Q9UPV9 953 aa23.51■■□□□ 1.35
DENND4A-206ENST00000564674 SLC12A5Q9H2X9 1139 aa23.5■■□□□ 1.35
DENND4A-206ENST00000564674 NUTM2DQ5VT03 806 aaPredicted RBP23.49■■□□□ 1.35
DENND4A-206ENST00000564674 EIF3AQ14152 1382 aaKnown RBP23.49■■□□□ 1.35
DENND4A-206ENST00000564674 MAPK8IP3Q9UPT6 1336 aa23.49■■□□□ 1.35
DENND4A-206ENST00000564674 PRDM15P57071 1507 aaPredicted RBP23.48■■□□□ 1.35
DENND4A-206ENST00000564674 FAM43AQ8N2R8 423 aa23.48■■□□□ 1.35
DENND4A-206ENST00000564674 SYNJ2O15056 1496 aa23.48■■□□□ 1.35
DENND4A-206ENST00000564674 RARSP54136 660 aaKnown RBP23.48■■□□□ 1.35
DENND4A-206ENST00000564674 SAFB2Q14151 953 aaKnown RBP eCLIP23.48■■□□□ 1.35
DENND4A-206ENST00000564674 PDE3AQ14432 1141 aa23.48■■□□□ 1.35
DENND4A-206ENST00000564674 ADCY10Q96PN6 1610 aa23.47■■□□□ 1.35
DENND4A-206ENST00000564674 NAP1L5Q96NT1 182 aaPredicted RBP23.47■■□□□ 1.35
DENND4A-206ENST00000564674 FTSJ3Q8IY81 847 aaKnown RBP23.46■■□□□ 1.35
DENND4A-206ENST00000564674 TSR2Q969E8 191 aaKnown RBP23.46■■□□□ 1.35
DENND4A-206ENST00000564674 FOXD4L1Q9NU39 408 aa23.46■■□□□ 1.35
DENND4A-206ENST00000564674 SAMD9LQ8IVG5 1584 aa23.46■■□□□ 1.35
DENND4A-206ENST00000564674 KIF3BO15066 747 aa23.45■■□□□ 1.34
DENND4A-206ENST00000564674 ADGRF5Q8IZF2 1346 aa23.44■■□□□ 1.34
DENND4A-206ENST00000564674 TMEM132EQ6IEE7 984 aa23.44■■□□□ 1.34
DENND4A-206ENST00000564674 U2AF1L5P0DN76 240 aaPredicted RBP23.43■■□□□ 1.34
DENND4A-206ENST00000564674 U2AF1Q01081 240 aaKnown RBP eCLIP23.43■■□□□ 1.34
DENND4A-206ENST00000564674 MTHFSP49914 203 aa23.43■■□□□ 1.34
DENND4A-206ENST00000564674 PMFBP1Q8TBY8 1022 aa23.42■■□□□ 1.34
DENND4A-206ENST00000564674 ASXL1Q8IXJ9 1541 aa23.42■■□□□ 1.34
DENND4A-206ENST00000564674 GOLGA6L3A6NEY3 463 aa23.41■■□□□ 1.34
DENND4A-206ENST00000564674 XRCC6P12956 609 aaKnown RBP eCLIP23.41■■□□□ 1.34
DENND4A-206ENST00000564674 ABCA8O94911 1581 aa23.41■■□□□ 1.34
DENND4A-206ENST00000564674 U2SURPO15042 1029 aaKnown RBP23.4■■□□□ 1.34
DENND4A-206ENST00000564674 INSRP06213 1382 aa23.4■■□□□ 1.34
DENND4A-206ENST00000564674 TBC1D32Q96NH3 1257 aa23.4■■□□□ 1.34
DENND4A-206ENST00000564674 RSPH6AQ9H0K4 717 aa23.4■■□□□ 1.34
DENND4A-206ENST00000564674 RWDD1Q9H446 243 aaPredicted RBP23.4■■□□□ 1.34
DENND4A-206ENST00000564674 SPAG9O60271 1321 aaKnown RBP23.4■■□□□ 1.34
DENND4A-206ENST00000564674 ITPRIPQ8IWB1 547 aa23.39■■□□□ 1.33
DENND4A-206ENST00000564674 ANTXR1Q9H6X2 564 aa23.39■■□□□ 1.33
DENND4A-206ENST00000564674 EFCAB2Q5VUJ9 269 aa23.38■■□□□ 1.33
DENND4A-206ENST00000564674 L1TD1Q5T7N2 865 aaKnown RBP23.37■■□□□ 1.33
DENND4A-206ENST00000564674 RUNDC1Q96C34 613 aa23.37■■□□□ 1.33
DENND4A-206ENST00000564674 C22orf23Q9BZE7 217 aa23.37■■□□□ 1.33
DENND4A-206ENST00000564674 SMC4Q9NTJ3 1288 aa23.36■■□□□ 1.33
DENND4A-206ENST00000564674 MCM4P33991 863 aa23.36■■□□□ 1.33
DENND4A-206ENST00000564674 PIK3C2GO75747 1445 aa23.36■■□□□ 1.33
DENND4A-206ENST00000564674 SCAF11Q99590 1463 aaKnown RBP23.35■■□□□ 1.33
DENND4A-206ENST00000564674 TRAK2O60296 914 aa23.34■■□□□ 1.33
DENND4A-206ENST00000564674 UBE2Q2Q8WVN8 375 aa23.32■■□□□ 1.32
DENND4A-206ENST00000564674 NUP160Q12769 1436 aa23.32■■□□□ 1.32
DENND4A-206ENST00000564674 ARHGEF5Q12774 1597 aa23.31■■□□□ 1.32
DENND4A-206ENST00000564674 TRAPPC8Q9Y2L5 1435 aa23.31■■□□□ 1.32
DENND4A-206ENST00000564674 EXOSC9Q06265 439 aaKnown RBP23.31■■□□□ 1.32
DENND4A-206ENST00000564674 DZIP1LQ8IYY4 767 aaKnown RBP23.31■■□□□ 1.32
DENND4A-206ENST00000564674 PNNQ9H307 717 aaKnown RBP23.31■■□□□ 1.32
DENND4A-206ENST00000564674 LNPKQ9C0E8 428 aa23.3■■□□□ 1.32
DENND4A-206ENST00000564674 HSP90AA1P07900 732 aaKnown RBP23.29■■□□□ 1.32
DENND4A-206ENST00000564674 NSD3Q9BZ95 1437 aa23.29■■□□□ 1.32
DENND4A-206ENST00000564674 CDC42BPBQ9Y5S2 1711 aa23.29■■□□□ 1.32
DENND4A-206ENST00000564674 MYO5CQ9NQX4 1742 aa23.29■■□□□ 1.32
DENND4A-206ENST00000564674 ZKSCAN2Q63HK3 967 aa23.29■■□□□ 1.32
DENND4A-206ENST00000564674 MVPQ14764 893 aaKnown RBP23.28■■□□□ 1.32
DENND4A-206ENST00000564674 HSCBQ8IWL3 235 aa23.27■■□□□ 1.32
DENND4A-206ENST00000564674 CFAP53Q96M91 514 aa23.27■■□□□ 1.32
DENND4A-206ENST00000564674 TTC37Q6PGP7 1564 aa23.26■■□□□ 1.31
DENND4A-206ENST00000564674 EIF2AK4Q9P2K8 1649 aaKnown RBP23.26■■□□□ 1.31
DENND4A-206ENST00000564674 CHMP5Q9NZZ3 219 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms