RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 SWT1Q5T5J6 900 aaKnown RBP9.8□□□□□ -0.84
CHD9-210ENST00000564582 TRIM66O15016 1216 aa9.79□□□□□ -0.84
CHD9-210ENST00000564582 RNF40O75150 1001 aa9.79□□□□□ -0.84
CHD9-210ENST00000564582 CLCN1P35523 988 aa9.79□□□□□ -0.84
CHD9-210ENST00000564582 RSPH4AQ5TD94 716 aa9.79□□□□□ -0.84
CHD9-210ENST00000564582 MMRN1Q13201 1228 aa9.78□□□□□ -0.84
CHD9-210ENST00000564582 AMHR2Q16671 573 aa9.78□□□□□ -0.84
CHD9-210ENST00000564582 THSD4Q6ZMP0 1018 aa9.78□□□□□ -0.84
CHD9-210ENST00000564582 PHOX2BQ99453 314 aa9.78□□□□□ -0.84
CHD9-210ENST00000564582 DAXXQ9UER7 740 aaPredicted RBP9.78□□□□□ -0.84
CHD9-210ENST00000564582 MDM2Q00987 491 aaPredicted RBP9.77□□□□□ -0.85
CHD9-210ENST00000564582 TTLL12Q14166 644 aaPredicted RBP9.77□□□□□ -0.85
CHD9-210ENST00000564582 SULF1Q8IWU6 871 aa9.77□□□□□ -0.85
CHD9-210ENST00000564582 GPCPD1Q9NPB8 672 aa9.77□□□□□ -0.85
CHD9-210ENST00000564582 BCAMP50895 628 aa9.76□□□□□ -0.85
CHD9-210ENST00000564582 TSR3Q9UJK0 312 aaKnown RBP9.76□□□□□ -0.85
CHD9-210ENST00000564582 PPP4CP60510 307 aa9.75□□□□□ -0.85
CHD9-210ENST00000564582 HPS5Q9UPZ3 1129 aa9.75□□□□□ -0.85
CHD9-210ENST00000564582 PDE4DQ08499 809 aa9.74□□□□□ -0.85
CHD9-210ENST00000564582 NYAP1Q6ZVC0 841 aa9.74□□□□□ -0.85
CHD9-210ENST00000564582 NLRP7Q8WX94 980 aa9.74□□□□□ -0.85
CHD9-210ENST00000564582 HCSTQ9UBK5 93 aa9.74□□□□□ -0.85
CHD9-210ENST00000564582 PRKCSHP14314 528 aaPredicted RBP9.73□□□□□ -0.85
CHD9-210ENST00000564582 PTPN5P54829 565 aa9.73□□□□□ -0.85
CHD9-210ENST00000564582 DDX11L8A8MPP1 907 aa9.72□□□□□ -0.85
CHD9-210ENST00000564582 PRR14Q9BWN1 585 aa9.72□□□□□ -0.85
CHD9-210ENST00000564582 RDH13Q8NBN7 331 aa9.71□□□□□ -0.86
CHD9-210ENST00000564582 KMT5BQ4FZB7 885 aa9.69□□□□□ -0.86
CHD9-210ENST00000564582 GIGYF2Q6Y7W6 1299 aaKnown RBP9.69□□□□□ -0.86
CHD9-210ENST00000564582 PARP9Q8IXQ6 854 aa9.69□□□□□ -0.86
CHD9-210ENST00000564582 WBP1LQ9NX94 342 aa9.69□□□□□ -0.86
CHD9-210ENST00000564582 TMUB1Q9BVT8 246 aa9.68□□□□□ -0.86
CHD9-210ENST00000564582 FAM217BQ9NTX9 383 aaPredicted RBP9.68□□□□□ -0.86
CHD9-210ENST00000564582 SSTR3P32745 418 aaPredicted RBP9.67□□□□□ -0.86
CHD9-210ENST00000564582 CFHP08603 1231 aa9.66□□□□□ -0.86
CHD9-210ENST00000564582 SLC10A3P09131 477 aa9.66□□□□□ -0.86
CHD9-210ENST00000564582 CD46P15529 392 aa9.65□□□□□ -0.86
CHD9-210ENST00000564582 REPIN1Q9BWE0 567 aaKnown RBP9.65□□□□□ -0.86
CHD9-210ENST00000564582 NEUROD2Q15784 382 aa9.64□□□□□ -0.87
CHD9-210ENST00000564582 GCGRP47871 477 aa9.62□□□□□ -0.87
CHD9-210ENST00000564582 ACTN4O43707 911 aaKnown RBP9.61□□□□□ -0.87
CHD9-210ENST00000564582 APLP1P51693 650 aa9.61□□□□□ -0.87
CHD9-210ENST00000564582 GRIPAP1Q4V328 841 aa9.61□□□□□ -0.87
CHD9-210ENST00000564582 KDM4CQ9H3R0 1056 aa9.61□□□□□ -0.87
CHD9-210ENST00000564582 DIXDC1Q155Q3 683 aa9.6□□□□□ -0.87
CHD9-210ENST00000564582 NUTM1Q86Y26 1132 aa9.6□□□□□ -0.87
CHD9-210ENST00000564582 BEGAINQ9BUH8 593 aa9.6□□□□□ -0.87
CHD9-210ENST00000564582 PCDHB3Q9Y5E6 796 aa9.6□□□□□ -0.87
CHD9-210ENST00000564582 NISCHQ9Y2I1 1504 aa9.6□□□□□ -0.87
CHD9-210ENST00000564582 KDM4AO75164 1064 aa9.59□□□□□ -0.87
CHD9-210ENST00000564582 MS4A1P11836 297 aa9.59□□□□□ -0.87
CHD9-210ENST00000564582 USP46P62068 366 aa9.59□□□□□ -0.87
CHD9-210ENST00000564582 GPBP1L1Q9HC44 474 aaPredicted RBP9.59□□□□□ -0.87
CHD9-210ENST00000564582 BRPF1P55201 1214 aaPredicted RBP9.58□□□□□ -0.88
CHD9-210ENST00000564582 DDRGK1Q96HY6 314 aa9.58□□□□□ -0.88
CHD9-210ENST00000564582 ATP6V1AP38606 617 aa9.57□□□□□ -0.88
CHD9-210ENST00000564582 FUT2Q10981 343 aa9.56□□□□□ -0.88
CHD9-210ENST00000564582 NR1I2O75469 434 aa9.54□□□□□ -0.88
CHD9-210ENST00000564582 IL21Q9HBE4 155 aa9.54□□□□□ -0.88
CHD9-210ENST00000564582 MTRQ99707 1265 aa9.53□□□□□ -0.88
CHD9-210ENST00000564582 RSPH6AQ9H0K4 717 aa9.53□□□□□ -0.88
CHD9-210ENST00000564582 COPS2P61201 443 aa9.52□□□□□ -0.89
CHD9-210ENST00000564582 KCNC4Q03721 635 aa9.52□□□□□ -0.89
CHD9-210ENST00000564582 SPIRE2Q8WWL2 714 aa9.52□□□□□ -0.89
CHD9-210ENST00000564582 HOXA2O43364 376 aa9.51□□□□□ -0.89
CHD9-210ENST00000564582 ITGBL1O95965 494 aaPredicted RBP9.51□□□□□ -0.89
CHD9-210ENST00000564582 PUS10Q3MIT2 529 aaKnown RBP9.51□□□□□ -0.89
CHD9-210ENST00000564582 BLOC1S3Q6QNY0 202 aa9.51□□□□□ -0.89
CHD9-210ENST00000564582 TBC1D2Q9BYX2 928 aa9.51□□□□□ -0.89
CHD9-210ENST00000564582 FAM117AQ9C073 453 aa9.51□□□□□ -0.89
CHD9-210ENST00000564582 TJAP1Q5JTD0 557 aa9.5□□□□□ -0.89
CHD9-210ENST00000564582 MORN1Q5T089 497 aa9.5□□□□□ -0.89
CHD9-210ENST00000564582 Q3C1V9 767 aa9.49□□□□□ -0.89
CHD9-210ENST00000564582 ZPR1O75312 459 aa9.48□□□□□ -0.89
CHD9-210ENST00000564582 PLA2G2EQ9NZK7 142 aa9.48□□□□□ -0.89
CHD9-210ENST00000564582 GJA5P36382 358 aa9.47□□□□□ -0.89
CHD9-210ENST00000564582 SCUBE3Q8IX30 993 aa9.47□□□□□ -0.89
CHD9-210ENST00000564582 FDX1P10109 184 aa9.46□□□□□ -0.9
CHD9-210ENST00000564582 IL27Q8NEV9 243 aa9.46□□□□□ -0.9
CHD9-210ENST00000564582 SLC27A5Q9Y2P5 690 aa9.46□□□□□ -0.9
CHD9-210ENST00000564582 SALL2Q9Y467 1007 aaPredicted RBP9.46□□□□□ -0.9
CHD9-210ENST00000564582 MOXD2PA6NHM9 499 aa9.45□□□□□ -0.9
CHD9-210ENST00000564582 FMNL1O95466 1100 aaPredicted RBP9.45□□□□□ -0.9
CHD9-210ENST00000564582 SH3D19Q5HYK7 790 aa9.45□□□□□ -0.9
CHD9-210ENST00000564582 IFFO2Q5TF58 517 aa9.45□□□□□ -0.9
CHD9-210ENST00000564582 MYSM1Q5VVJ2 828 aa9.45□□□□□ -0.9
CHD9-210ENST00000564582 PLEKHG3A1L390 1219 aa9.44□□□□□ -0.9
CHD9-210ENST00000564582 RSBN1LQ6PCB5 846 aaPredicted RBP9.44□□□□□ -0.9
CHD9-210ENST00000564582 RIC3Q7Z5B4 369 aa9.44□□□□□ -0.9
CHD9-210ENST00000564582 ATP1B4Q9UN42 357 aaPredicted RBP9.44□□□□□ -0.9
CHD9-210ENST00000564582 SPTLC1O15269 473 aa9.43□□□□□ -0.9
CHD9-210ENST00000564582 NDUFV2P19404 249 aa9.43□□□□□ -0.9
CHD9-210ENST00000564582 CLK2P49760 499 aaKnown RBP9.43□□□□□ -0.9
CHD9-210ENST00000564582 ZNF516Q92618 1163 aa9.43□□□□□ -0.9
CHD9-210ENST00000564582 ADH1BP00325 375 aa9.42□□□□□ -0.9
CHD9-210ENST00000564582 SKIV2LQ15477 1246 aaKnown RBP9.42□□□□□ -0.9
CHD9-210ENST00000564582 HLA-CQ95604 372 aa9.42□□□□□ -0.9
CHD9-210ENST00000564582 SPSB2Q99619 263 aa9.42□□□□□ -0.9
CHD9-210ENST00000564582 GGCXP38435 758 aa9.41□□□□□ -0.9
CHD9-210ENST00000564582 GUCA2AQ02747 115 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms