RNA–Protein interactions for RNA: ENST00000564440.5

PKM-212, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 3,016 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-212ENST00000564440 MLECQ14165 292 aa12.99□□□□□ -0.33
PKM-212ENST00000564440 PPLO60437 1756 aa12.99□□□□□ -0.33
PKM-212ENST00000564440 KIF3BO15066 747 aa12.99□□□□□ -0.33
PKM-212ENST00000564440 PPP1R15AO75807 674 aaPredicted RBP12.99□□□□□ -0.33
PKM-212ENST00000564440 DIP2AQ14689 1571 aa12.99□□□□□ -0.33
PKM-212ENST00000564440 NBPF8Q3BBV2 869 aa12.99□□□□□ -0.33
PKM-212ENST00000564440 NUTM2DQ5VT03 806 aaPredicted RBP12.99□□□□□ -0.33
PKM-212ENST00000564440 ANP32EQ9BTT0 268 aa12.99□□□□□ -0.33
PKM-212ENST00000564440 MYO5BQ9ULV0 1848 aa12.99□□□□□ -0.33
PKM-212ENST00000564440 PRAG1Q86YV5 1406 aa12.98□□□□□ -0.33
PKM-212ENST00000564440 BCL11AQ9H165 835 aa12.98□□□□□ -0.33
PKM-212ENST00000564440 SETD1AO15047 1707 aaKnown RBP12.97□□□□□ -0.33
PKM-212ENST00000564440 CFAP65Q6ZU64 1925 aaKnown RBP12.96□□□□□ -0.33
PKM-212ENST00000564440 ZFYVE9O95405 1425 aa12.95□□□□□ -0.34
PKM-212ENST00000564440 KIAA1210Q9ULL0 1709 aa12.95□□□□□ -0.34
PKM-212ENST00000564440 TNRQ92752 1358 aa12.94□□□□□ -0.34
PKM-212ENST00000564440 UHRF1BP1Q6BDS2 1440 aa12.94□□□□□ -0.34
PKM-212ENST00000564440 CHGAP10645 457 aaKnown RBP12.94□□□□□ -0.34
PKM-212ENST00000564440 DCAF11Q8TEB1 546 aa12.94□□□□□ -0.34
PKM-212ENST00000564440 NWD1Q149M9 1564 aa12.94□□□□□ -0.34
PKM-212ENST00000564440 SETBP1Q9Y6X0 1596 aa12.94□□□□□ -0.34
PKM-212ENST00000564440 LAMC1P11047 1609 aa12.93□□□□□ -0.34
PKM-212ENST00000564440 NRXN1Q9ULB1 1477 aa12.93□□□□□ -0.34
PKM-212ENST00000564440 NEXMIFQ5QGS0 1516 aa12.92□□□□□ -0.34
PKM-212ENST00000564440 IQGAP1P46940 1657 aa12.91□□□□□ -0.34
PKM-212ENST00000564440 NRXN3Q9Y4C0 1643 aa12.91□□□□□ -0.34
PKM-212ENST00000564440 C11orf95C9JLR9 678 aaPredicted RBP12.91□□□□□ -0.34
PKM-212ENST00000564440 KNDC1Q76NI1 1749 aa12.9□□□□□ -0.34
PKM-212ENST00000564440 IQSEC2Q5JU85 1478 aa12.9□□□□□ -0.34
PKM-212ENST00000564440 MYOM2P54296 1465 aa12.9□□□□□ -0.34
PKM-212ENST00000564440 SPATA31E1Q6ZUB1 1445 aa12.9□□□□□ -0.34
PKM-212ENST00000564440 SLC52A1Q9NWF4 448 aa12.89□□□□□ -0.35
PKM-212ENST00000564440 WASHC2CQ9Y4E1 1318 aa12.89□□□□□ -0.35
PKM-212ENST00000564440 HSPA5P11021 654 aaKnown RBP12.88□□□□□ -0.35
PKM-212ENST00000564440 ANKRD30BQ9BXX2 1392 aa12.87□□□□□ -0.35
PKM-212ENST00000564440 ARID4BQ4LE39 1312 aaPredicted RBP12.86□□□□□ -0.35
PKM-212ENST00000564440 NBPF1Q3BBV0 1214 aa12.86□□□□□ -0.35
PKM-212ENST00000564440 CHD2O14647 1828 aaKnown RBP12.86□□□□□ -0.35
PKM-212ENST00000564440 XRN1Q8IZH2 1706 aaKnown RBP12.85□□□□□ -0.35
PKM-212ENST00000564440 BCANQ96GW7 911 aa12.84□□□□□ -0.35
PKM-212ENST00000564440 FKBP8Q14318 412 aa12.82□□□□□ -0.36
PKM-212ENST00000564440 STAC3Q96MF2 364 aa12.82□□□□□ -0.36
PKM-212ENST00000564440 SCAF11Q99590 1463 aaKnown RBP12.81□□□□□ -0.36
PKM-212ENST00000564440 RPGRIP1LQ68CZ1 1315 aa12.81□□□□□ -0.36
PKM-212ENST00000564440 TMEM2Q9UHN6 1383 aa12.81□□□□□ -0.36
PKM-212ENST00000564440 LTBP4Q8N2S1 1624 aa12.8□□□□□ -0.36
PKM-212ENST00000564440 PIK3R4Q99570 1358 aa12.8□□□□□ -0.36
PKM-212ENST00000564440 PLEKHG1Q9ULL1 1385 aa12.79□□□□□ -0.36
PKM-212ENST00000564440 STRCP1A6NGW2 1772 aa12.79□□□□□ -0.36
PKM-212ENST00000564440 CPS1P31327 1500 aa12.78□□□□□ -0.36
PKM-212ENST00000564440 ESF1Q9H501 851 aaKnown RBP12.78□□□□□ -0.36
PKM-212ENST00000564440 XIRP1Q702N8 1843 aaKnown RBP12.78□□□□□ -0.36
PKM-212ENST00000564440 FBXO31Q5XUX0 539 aaPredicted RBP12.78□□□□□ -0.36
PKM-212ENST00000564440 CARD11Q9BXL7 1154 aa12.78□□□□□ -0.36
PKM-212ENST00000564440 WASHC2AQ641Q2 1341 aa12.77□□□□□ -0.36
PKM-212ENST00000564440 NEFLP07196 543 aa12.77□□□□□ -0.37
PKM-212ENST00000564440 NKTRP30414 1462 aaKnown RBP12.76□□□□□ -0.37
PKM-212ENST00000564440 NCOA3Q9Y6Q9 1424 aa12.76□□□□□ -0.37
PKM-212ENST00000564440 ST20-MTHFSA0A0A6YYL1 179 aa12.76□□□□□ -0.37
PKM-212ENST00000564440 EIF4G2P78344 907 aaKnown RBP eCLIP12.76□□□□□ -0.37
PKM-212ENST00000564440 SAFB2Q14151 953 aaKnown RBP eCLIP12.76□□□□□ -0.37
PKM-212ENST00000564440 CCDC184Q52MB2 194 aa12.75□□□□□ -0.37
PKM-212ENST00000564440 DLC1Q96QB1 1528 aa12.75□□□□□ -0.37
PKM-212ENST00000564440 CCDC144AA2RUR9 1427 aa12.74□□□□□ -0.37
PKM-212ENST00000564440 RBM19Q9Y4C8 960 aaKnown RBP12.74□□□□□ -0.37
PKM-212ENST00000564440 TECPR2O15040 1411 aa12.74□□□□□ -0.37
PKM-212ENST00000564440 THEMISQ8N1K5 641 aaPredicted RBP12.74□□□□□ -0.37
PKM-212ENST00000564440 PIK3C2GO75747 1445 aa12.74□□□□□ -0.37
PKM-212ENST00000564440 RIMS2Q9UQ26 1411 aa12.74□□□□□ -0.37
PKM-212ENST00000564440 TRPM1Q7Z4N2 1603 aa12.73□□□□□ -0.37
PKM-212ENST00000564440 NPHP4O75161 1426 aaPredicted RBP12.73□□□□□ -0.37
PKM-212ENST00000564440 ADAMTS13Q76LX8 1427 aa12.72□□□□□ -0.37
PKM-212ENST00000564440 TMEM132EQ6IEE7 984 aa12.72□□□□□ -0.37
PKM-212ENST00000564440 CEBPAP49715 358 aaPredicted RBP12.72□□□□□ -0.37
PKM-212ENST00000564440 IDI1Q13907 227 aa12.72□□□□□ -0.37
PKM-212ENST00000564440 ALKQ9UM73 1620 aa12.72□□□□□ -0.37
PKM-212ENST00000564440 ADGRB1O14514 1584 aa12.71□□□□□ -0.37
PKM-212ENST00000564440 ADGRB2O60241 1585 aa12.71□□□□□ -0.37
PKM-212ENST00000564440 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.71□□□□□ -0.38
PKM-212ENST00000564440 ASXL1Q8IXJ9 1541 aa12.71□□□□□ -0.38
PKM-212ENST00000564440 DMRT2Q9Y5R5 561 aa12.7□□□□□ -0.38
PKM-212ENST00000564440 CFAP70Q5T0N1 1121 aa12.69□□□□□ -0.38
PKM-212ENST00000564440 PTCH1Q13635 1447 aa12.69□□□□□ -0.38
PKM-212ENST00000564440 TIMELESSQ9UNS1 1208 aa12.68□□□□□ -0.38
PKM-212ENST00000564440 ROCK2O75116 1388 aaKnown RBP12.67□□□□□ -0.38
PKM-212ENST00000564440 ARHGEF28Q8N1W1 1705 aaKnown RBP12.67□□□□□ -0.38
PKM-212ENST00000564440 STK26Q9P289 416 aa12.67□□□□□ -0.38
PKM-212ENST00000564440 USP47Q96K76 1375 aa12.66□□□□□ -0.38
PKM-212ENST00000564440 KIF7Q2M1P5 1343 aa12.66□□□□□ -0.38
PKM-212ENST00000564440 ADGRF5Q8IZF2 1346 aa12.66□□□□□ -0.38
PKM-212ENST00000564440 HDGFP51858 240 aaKnown RBP12.66□□□□□ -0.38
PKM-212ENST00000564440 ANP32CO43423 234 aa12.65□□□□□ -0.38
PKM-212ENST00000564440 CCER2I3L3R5 266 aa12.65□□□□□ -0.38
PKM-212ENST00000564440 FAM9BQ8IZU0 186 aa12.64□□□□□ -0.39
PKM-212ENST00000564440 SALL2Q9Y467 1007 aaPredicted RBP12.64□□□□□ -0.39
PKM-212ENST00000564440 GPRASP1Q5JY77 1395 aa12.64□□□□□ -0.39
PKM-212ENST00000564440 SIRT1Q96EB6 747 aa12.64□□□□□ -0.39
PKM-212ENST00000564440 TRAK1Q9UPV9 953 aa12.64□□□□□ -0.39
PKM-212ENST00000564440 TBX22Q9Y458 520 aa12.63□□□□□ -0.39
PKM-212ENST00000564440 DCCP43146 1447 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms