RNA–Protein interactions for RNA: ENST00000564343.5

TCF4-223, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-223ENST00000564343 TSR3Q9UJK0 312 aaKnown RBP9.88□□□□□ -0.83
TCF4-223ENST00000564343 PNMA3Q9UL41 463 aa9.88□□□□□ -0.83
TCF4-223ENST00000564343 URB2Q14146 1524 aaKnown RBP9.87□□□□□ -0.83
TCF4-223ENST00000564343 PRDM2Q13029 1718 aa9.87□□□□□ -0.83
TCF4-223ENST00000564343 MLLT3P42568 568 aaPredicted RBP9.86□□□□□ -0.83
TCF4-223ENST00000564343 HDGFP51858 240 aaKnown RBP9.86□□□□□ -0.83
TCF4-223ENST00000564343 SAMD7Q7Z3H4 446 aa9.86□□□□□ -0.83
TCF4-223ENST00000564343 RSF1Q96T23 1441 aaPredicted RBP9.86□□□□□ -0.83
TCF4-223ENST00000564343 PPP4CP60510 307 aa9.85□□□□□ -0.83
TCF4-223ENST00000564343 TOP2AP11388 1531 aaKnown RBP9.85□□□□□ -0.83
TCF4-223ENST00000564343 NPDC1Q9NQX5 325 aaPredicted RBP9.84□□□□□ -0.83
TCF4-223ENST00000564343 NUDT18Q6ZVK8 323 aa9.83□□□□□ -0.84
TCF4-223ENST00000564343 PADI6Q6TGC4 694 aa9.82□□□□□ -0.84
TCF4-223ENST00000564343 TTC13Q8NBP0 860 aa9.82□□□□□ -0.84
TCF4-223ENST00000564343 RIMBP3CA6NJZ7 1639 aa9.81□□□□□ -0.84
TCF4-223ENST00000564343 RIMBP3BA6NNM3 1639 aa9.81□□□□□ -0.84
TCF4-223ENST00000564343 RIMBP3Q9UFD9 1639 aa9.81□□□□□ -0.84
TCF4-223ENST00000564343 HAP1P54257 671 aaPredicted RBP9.8□□□□□ -0.84
TCF4-223ENST00000564343 TJAP1Q5JTD0 557 aa9.8□□□□□ -0.84
TCF4-223ENST00000564343 NECTIN2Q92692 538 aa9.8□□□□□ -0.84
TCF4-223ENST00000564343 ZNF516Q92618 1163 aa9.79□□□□□ -0.84
TCF4-223ENST00000564343 ZNF608Q9ULD9 1512 aaPredicted RBP9.78□□□□□ -0.84
TCF4-223ENST00000564343 NUTM2FA1L443 756 aa9.78□□□□□ -0.84
TCF4-223ENST00000564343 SLC4A3P48751 1232 aa9.78□□□□□ -0.84
TCF4-223ENST00000564343 PTGDRQ13258 359 aa9.78□□□□□ -0.84
TCF4-223ENST00000564343 SEMA3EO15041 775 aa9.77□□□□□ -0.85
TCF4-223ENST00000564343 SMYD5Q6GMV2 418 aa9.77□□□□□ -0.85
TCF4-223ENST00000564343 Q6ZNB5 142 aa9.76□□□□□ -0.85
TCF4-223ENST00000564343 CCDC88BA6NC98 1476 aa9.75□□□□□ -0.85
TCF4-223ENST00000564343 RNF40O75150 1001 aa9.75□□□□□ -0.85
TCF4-223ENST00000564343 SLF2Q8IX21 1173 aa9.75□□□□□ -0.85
TCF4-223ENST00000564343 IFT140Q96RY7 1462 aa9.74□□□□□ -0.85
TCF4-223ENST00000564343 ARHGEF11O15085 1522 aa9.74□□□□□ -0.85
TCF4-223ENST00000564343 TOPBP1Q92547 1522 aa9.74□□□□□ -0.85
TCF4-223ENST00000564343 NKX2-3Q8TAU0 364 aa9.74□□□□□ -0.85
TCF4-223ENST00000564343 MTRQ99707 1265 aa9.74□□□□□ -0.85
TCF4-223ENST00000564343 EIF4G3O43432 1585 aaKnown RBP9.73□□□□□ -0.85
TCF4-223ENST00000564343 FCHSD2O94868 740 aa9.73□□□□□ -0.85
TCF4-223ENST00000564343 RBM46Q8TBY0 533 aaKnown RBP9.73□□□□□ -0.85
TCF4-223ENST00000564343 EYA1Q99502 592 aa9.73□□□□□ -0.85
TCF4-223ENST00000564343 APLP1P51693 650 aa9.72□□□□□ -0.85
TCF4-223ENST00000564343 SWT1Q5T5J6 900 aaKnown RBP9.72□□□□□ -0.85
TCF4-223ENST00000564343 PPP1R18Q6NYC8 613 aa9.72□□□□□ -0.85
TCF4-223ENST00000564343 CHD1O14646 1710 aa9.72□□□□□ -0.85
TCF4-223ENST00000564343 TESPA1A2RU30 521 aaPredicted RBP9.71□□□□□ -0.86
TCF4-223ENST00000564343 LCE2BO14633 110 aa9.7□□□□□ -0.86
TCF4-223ENST00000564343 GFRA3O60609 400 aa9.7□□□□□ -0.86
TCF4-223ENST00000564343 DNAJB2P25686 324 aa9.7□□□□□ -0.86
TCF4-223ENST00000564343 PRKD2Q9BZL6 878 aa9.7□□□□□ -0.86
TCF4-223ENST00000564343 TARBP1Q13395 1621 aaKnown RBP9.69□□□□□ -0.86
TCF4-223ENST00000564343 DNMBPQ6XZF7 1577 aa9.69□□□□□ -0.86
TCF4-223ENST00000564343 IL21Q9HBE4 155 aa9.69□□□□□ -0.86
TCF4-223ENST00000564343 PRR14Q9BWN1 585 aa9.68□□□□□ -0.86
TCF4-223ENST00000564343 ADGRG1Q9Y653 693 aa9.68□□□□□ -0.86
TCF4-223ENST00000564343 AQRO60306 1485 aaKnown RBP eCLIP9.67□□□□□ -0.86
TCF4-223ENST00000564343 COPS2P61201 443 aa9.67□□□□□ -0.86
TCF4-223ENST00000564343 HIC1Q14526 733 aa9.67□□□□□ -0.86
TCF4-223ENST00000564343 CYB5RLQ6IPT4 315 aa9.67□□□□□ -0.86
TCF4-223ENST00000564343 ABCC8Q09428 1581 aa9.67□□□□□ -0.86
TCF4-223ENST00000564343 VSIG10Q8N0Z9 540 aa9.66□□□□□ -0.86
TCF4-223ENST00000564343 TMEM134Q9H6X4 195 aa9.65□□□□□ -0.86
TCF4-223ENST00000564343 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.65□□□□□ -0.86
TCF4-223ENST00000564343 KDM2AQ9Y2K7 1162 aa9.65□□□□□ -0.86
TCF4-223ENST00000564343 OATP04181 439 aa9.64□□□□□ -0.87
TCF4-223ENST00000564343 RBM26Q5T8P6 1007 aaKnown RBP9.64□□□□□ -0.87
TCF4-223ENST00000564343 ARAP1Q96P48 1450 aa9.64□□□□□ -0.87
TCF4-223ENST00000564343 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.63□□□□□ -0.87
TCF4-223ENST00000564343 RCCD1A6NED2 376 aa9.63□□□□□ -0.87
TCF4-223ENST00000564343 POLA1P09884 1462 aaPredicted RBP9.63□□□□□ -0.87
TCF4-223ENST00000564343 FAM161AQ3B820 660 aa9.62□□□□□ -0.87
TCF4-223ENST00000564343 TRAF7Q6Q0C0 670 aa9.62□□□□□ -0.87
TCF4-223ENST00000564343 RAD54L2Q9Y4B4 1467 aa9.61□□□□□ -0.87
TCF4-223ENST00000564343 GNPATO15228 680 aa9.61□□□□□ -0.87
TCF4-223ENST00000564343 KMT5BQ4FZB7 885 aa9.6□□□□□ -0.87
TCF4-223ENST00000564343 PXYLP1Q8TE99 480 aa9.6□□□□□ -0.87
TCF4-223ENST00000564343 PCDHB3Q9Y5E6 796 aa9.59□□□□□ -0.87
TCF4-223ENST00000564343 TULP1O00294 542 aaPredicted RBP9.58□□□□□ -0.88
TCF4-223ENST00000564343 TDRD9Q8NDG6 1382 aaKnown RBP9.58□□□□□ -0.88
TCF4-223ENST00000564343 RSPH4AQ5TD94 716 aa9.57□□□□□ -0.88
TCF4-223ENST00000564343 SOGA1O94964 1423 aa9.56□□□□□ -0.88
TCF4-223ENST00000564343 ZPR1O75312 459 aa9.56□□□□□ -0.88
TCF4-223ENST00000564343 GGCXP38435 758 aa9.56□□□□□ -0.88
TCF4-223ENST00000564343 BLOC1S3Q6QNY0 202 aa9.56□□□□□ -0.88
TCF4-223ENST00000564343 METTL3Q86U44 580 aaKnown RBP9.56□□□□□ -0.88
TCF4-223ENST00000564343 GPIHBP1Q8IV16 184 aa9.56□□□□□ -0.88
TCF4-223ENST00000564343 CLASP1Q7Z460 1538 aa9.56□□□□□ -0.88
TCF4-223ENST00000564343 SNAPC4Q5SXM2 1469 aa9.55□□□□□ -0.88
TCF4-223ENST00000564343 GPR37O15354 613 aa9.55□□□□□ -0.88
TCF4-223ENST00000564343 LAPTM4AQ15012 233 aa9.55□□□□□ -0.88
TCF4-223ENST00000564343 V9GY48 417 aaPredicted RBP9.55□□□□□ -0.88
TCF4-223ENST00000564343 FGD5Q6ZNL6 1462 aa9.54□□□□□ -0.88
TCF4-223ENST00000564343 ACTN4O43707 911 aaKnown RBP9.54□□□□□ -0.88
TCF4-223ENST00000564343 SLC24A1O60721 1099 aa9.54□□□□□ -0.88
TCF4-223ENST00000564343 CFHP08603 1231 aa9.54□□□□□ -0.88
TCF4-223ENST00000564343 WDR97A6NE52 1622 aa9.53□□□□□ -0.88
TCF4-223ENST00000564343 CUX1P39880 1505 aa9.53□□□□□ -0.88
TCF4-223ENST00000564343 PPEF1O14829 653 aaPredicted RBP9.53□□□□□ -0.88
TCF4-223ENST00000564343 FECHP22830 423 aa9.53□□□□□ -0.88
TCF4-223ENST00000564343 EMID1Q96A84 441 aaPredicted RBP9.53□□□□□ -0.88
TCF4-223ENST00000564343 NRG2O14511 850 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms