RNA–Protein interactions for RNA: ENST00000564070.1

SPSB3-205, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 3

Gene SPSB3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-205ENST00000564070 TXNDC2Q86VQ3 553 aa23.96■■□□□ 1.43
SPSB3-205ENST00000564070 TOM1O60784 492 aa23.95■■□□□ 1.42
SPSB3-205ENST00000564070 TRPM2O94759 1503 aa23.94■■□□□ 1.42
SPSB3-205ENST00000564070 SLC4A1APQ9BWU0 796 aaKnown RBP23.94■■□□□ 1.42
SPSB3-205ENST00000564070 MYO5BQ9ULV0 1848 aa23.94■■□□□ 1.42
SPSB3-205ENST00000564070 ALKQ9UM73 1620 aa23.93■■□□□ 1.42
SPSB3-205ENST00000564070 LRRC7Q96NW7 1537 aa23.92■■□□□ 1.42
SPSB3-205ENST00000564070 ZFYVE9O95405 1425 aa23.91■■□□□ 1.42
SPSB3-205ENST00000564070 CHGAP10645 457 aaKnown RBP23.89■■□□□ 1.41
SPSB3-205ENST00000564070 CLTCL1P53675 1640 aa23.88■■□□□ 1.41
SPSB3-205ENST00000564070 RIMS2Q9UQ26 1411 aa23.88■■□□□ 1.41
SPSB3-205ENST00000564070 RAB3GAP2Q9H2M9 1393 aa23.88■■□□□ 1.41
SPSB3-205ENST00000564070 SENP3Q9H4L4 574 aaPredicted RBP23.87■■□□□ 1.41
SPSB3-205ENST00000564070 HDGFP51858 240 aaKnown RBP23.86■■□□□ 1.41
SPSB3-205ENST00000564070 MPHOSPH9Q99550 1183 aa23.84■■□□□ 1.41
SPSB3-205ENST00000564070 SOCS7O14512 581 aa23.83■■□□□ 1.41
SPSB3-205ENST00000564070 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.83■■□□□ 1.41
SPSB3-205ENST00000564070 PLEKHG1Q9ULL1 1385 aa23.82■■□□□ 1.4
SPSB3-205ENST00000564070 PPP1R15AO75807 674 aaPredicted RBP23.81■■□□□ 1.4
SPSB3-205ENST00000564070 KIF1BO60333 1816 aa23.81■■□□□ 1.4
SPSB3-205ENST00000564070 SLC26A8Q96RN1 970 aa23.8■■□□□ 1.4
SPSB3-205ENST00000564070 HRCP23327 699 aa23.78■■□□□ 1.4
SPSB3-205ENST00000564070 FOXD1Q16676 465 aa23.78■■□□□ 1.4
SPSB3-205ENST00000564070 XIRP1Q702N8 1843 aaKnown RBP23.77■■□□□ 1.4
SPSB3-205ENST00000564070 RBM33Q96EV2 1170 aaKnown RBP23.76■■□□□ 1.39
SPSB3-205ENST00000564070 ZNF326Q5BKZ1 582 aaKnown RBP23.75■■□□□ 1.39
SPSB3-205ENST00000564070 BCANQ96GW7 911 aa23.75■■□□□ 1.39
SPSB3-205ENST00000564070 MED1Q15648 1581 aaPredicted RBP23.74■■□□□ 1.39
SPSB3-205ENST00000564070 CCDC144AA2RUR9 1427 aa23.74■■□□□ 1.39
SPSB3-205ENST00000564070 NEXMIFQ5QGS0 1516 aa23.74■■□□□ 1.39
SPSB3-205ENST00000564070 DIP2AQ14689 1571 aa23.74■■□□□ 1.39
SPSB3-205ENST00000564070 NUTM2DQ5VT03 806 aaPredicted RBP23.72■■□□□ 1.39
SPSB3-205ENST00000564070 KCNA6P17658 529 aa23.71■■□□□ 1.39
SPSB3-205ENST00000564070 NWD1Q149M9 1564 aa23.7■■□□□ 1.38
SPSB3-205ENST00000564070 TMEM94Q12767 1356 aa23.7■■□□□ 1.38
SPSB3-205ENST00000564070 ADAMTS13Q76LX8 1427 aa23.69■■□□□ 1.38
SPSB3-205ENST00000564070 TBX22Q9Y458 520 aa23.69■■□□□ 1.38
SPSB3-205ENST00000564070 SETBP1Q9Y6X0 1596 aa23.69■■□□□ 1.38
SPSB3-205ENST00000564070 RPGRIP1LQ68CZ1 1315 aa23.67■■□□□ 1.38
SPSB3-205ENST00000564070 PROSER2Q86WR7 435 aaPredicted RBP23.67■■□□□ 1.38
SPSB3-205ENST00000564070 NRXN3Q9Y4C0 1643 aa23.66■■□□□ 1.38
SPSB3-205ENST00000564070 NKTRP30414 1462 aaKnown RBP23.66■■□□□ 1.38
SPSB3-205ENST00000564070 CHD2O14647 1828 aaKnown RBP23.64■■□□□ 1.38
SPSB3-205ENST00000564070 SPATA31E1Q6ZUB1 1445 aa23.64■■□□□ 1.37
SPSB3-205ENST00000564070 PIK3R4Q99570 1358 aa23.64■■□□□ 1.37
SPSB3-205ENST00000564070 PPLO60437 1756 aa23.63■■□□□ 1.37
SPSB3-205ENST00000564070 VGFO15240 615 aaPredicted RBP23.62■■□□□ 1.37
SPSB3-205ENST00000564070 ANKRD30BQ9BXX2 1392 aa23.59■■□□□ 1.37
SPSB3-205ENST00000564070 IFT172Q9UG01 1749 aa23.58■■□□□ 1.37
SPSB3-205ENST00000564070 PHF23Q9BUL5 403 aaPredicted RBP23.57■■□□□ 1.36
SPSB3-205ENST00000564070 FAM135BQ49AJ0 1406 aa23.57■■□□□ 1.36
SPSB3-205ENST00000564070 RGL3Q3MIN7 710 aa23.55■■□□□ 1.36
SPSB3-205ENST00000564070 PTPRUQ92729 1446 aa23.53■■□□□ 1.36
SPSB3-205ENST00000564070 SETD1AO15047 1707 aaKnown RBP23.53■■□□□ 1.36
SPSB3-205ENST00000564070 XRN1Q8IZH2 1706 aaKnown RBP23.53■■□□□ 1.36
SPSB3-205ENST00000564070 METP08581 1390 aa23.52■■□□□ 1.36
SPSB3-205ENST00000564070 ROBO1Q9Y6N7 1651 aa23.52■■□□□ 1.36
SPSB3-205ENST00000564070 TRIM26Q12899 539 aaPredicted RBP23.51■■□□□ 1.35
SPSB3-205ENST00000564070 AMOTL2Q9Y2J4 779 aa23.51■■□□□ 1.35
SPSB3-205ENST00000564070 NCOA3Q9Y6Q9 1424 aa23.5■■□□□ 1.35
SPSB3-205ENST00000564070 RGS17Q9UGC6 210 aaPredicted RBP23.5■■□□□ 1.35
SPSB3-205ENST00000564070 MSH6P52701 1360 aa23.5■■□□□ 1.35
SPSB3-205ENST00000564070 SLAIN2Q9P270 581 aa23.49■■□□□ 1.35
SPSB3-205ENST00000564070 ADGRF5Q8IZF2 1346 aa23.48■■□□□ 1.35
SPSB3-205ENST00000564070 MYOM2P54296 1465 aa23.48■■□□□ 1.35
SPSB3-205ENST00000564070 PIK3C2GO75747 1445 aa23.46■■□□□ 1.35
SPSB3-205ENST00000564070 NRXN1Q9ULB1 1477 aa23.44■■□□□ 1.34
SPSB3-205ENST00000564070 PRAG1Q86YV5 1406 aa23.43■■□□□ 1.34
SPSB3-205ENST00000564070 C14orf37Q86TY3 774 aa23.42■■□□□ 1.34
SPSB3-205ENST00000564070 PTCH1Q13635 1447 aa23.41■■□□□ 1.34
SPSB3-205ENST00000564070 LAMC1P11047 1609 aa23.39■■□□□ 1.33
SPSB3-205ENST00000564070 PHLPP1O60346 1717 aa23.37■■□□□ 1.33
SPSB3-205ENST00000564070 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.37■■□□□ 1.33
SPSB3-205ENST00000564070 C19orf44Q9H6X5 657 aa23.37■■□□□ 1.33
SPSB3-205ENST00000564070 DCCP43146 1447 aa23.36■■□□□ 1.33
SPSB3-205ENST00000564070 STAC3Q96MF2 364 aa23.36■■□□□ 1.33
SPSB3-205ENST00000564070 ASXL1Q8IXJ9 1541 aa23.36■■□□□ 1.33
SPSB3-205ENST00000564070 POTEAQ6S8J7 498 aa23.35■■□□□ 1.33
SPSB3-205ENST00000564070 ROBO2Q9HCK4 1378 aa23.34■■□□□ 1.33
SPSB3-205ENST00000564070 DHX57Q6P158 1386 aaKnown RBP23.33■■□□□ 1.33
SPSB3-205ENST00000564070 ATF3P18847 181 aa23.33■■□□□ 1.33
SPSB3-205ENST00000564070 CADPS2Q86UW7 1296 aa23.33■■□□□ 1.33
SPSB3-205ENST00000564070 DCAF11Q8TEB1 546 aa23.33■■□□□ 1.33
SPSB3-205ENST00000564070 C14orf93Q9H972 538 aaKnown RBP23.33■■□□□ 1.33
SPSB3-205ENST00000564070 TECPR2O15040 1411 aa23.33■■□□□ 1.32
SPSB3-205ENST00000564070 ADGRL3Q9HAR2 1447 aa23.33■■□□□ 1.32
SPSB3-205ENST00000564070 LRPPRCP42704 1394 aaKnown RBP23.32■■□□□ 1.32
SPSB3-205ENST00000564070 KNDC1Q76NI1 1749 aa23.32■■□□□ 1.32
SPSB3-205ENST00000564070 NALCNQ8IZF0 1738 aa23.32■■□□□ 1.32
SPSB3-205ENST00000564070 COL16A1Q07092 1604 aaPredicted RBP23.31■■□□□ 1.32
SPSB3-205ENST00000564070 ABCC11Q96J66 1382 aa23.29■■□□□ 1.32
SPSB3-205ENST00000564070 JCADQ9P266 1359 aa23.29■■□□□ 1.32
SPSB3-205ENST00000564070 CFAP70Q5T0N1 1121 aa23.29■■□□□ 1.32
SPSB3-205ENST00000564070 YTHDC2Q9H6S0 1430 aaKnown RBP23.29■■□□□ 1.32
SPSB3-205ENST00000564070 TMEM132EQ6IEE7 984 aa23.28■■□□□ 1.32
SPSB3-205ENST00000564070 KDM2AQ9Y2K7 1162 aa23.28■■□□□ 1.32
SPSB3-205ENST00000564070 BRINP3Q76B58 766 aa23.27■■□□□ 1.32
SPSB3-205ENST00000564070 STK26Q9P289 416 aa23.25■■□□□ 1.31
SPSB3-205ENST00000564070 ADGRB1O14514 1584 aa23.25■■□□□ 1.31
SPSB3-205ENST00000564070 MST1RQ04912 1400 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms