RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 PHF23Q9BUL5 403 aaPredicted RBP14.54□□□□□ -0.08
CLN6-203ENST00000563917 GCC2Q8IWJ2 1684 aa14.53□□□□□ -0.08
CLN6-203ENST00000563917 UNC13BO14795 1591 aa14.52□□□□□ -0.08
CLN6-203ENST00000563917 NUP155O75694 1391 aa14.52□□□□□ -0.08
CLN6-203ENST00000563917 RIMS2Q9UQ26 1411 aa14.5□□□□□ -0.09
CLN6-203ENST00000563917 TMEM94Q12767 1356 aa14.49□□□□□ -0.09
CLN6-203ENST00000563917 PLEKHG1Q9ULL1 1385 aa14.48□□□□□ -0.09
CLN6-203ENST00000563917 MED1Q15648 1581 aaPredicted RBP14.48□□□□□ -0.09
CLN6-203ENST00000563917 IQGAP3Q86VI3 1631 aa14.48□□□□□ -0.09
CLN6-203ENST00000563917 MSH6P52701 1360 aa14.47□□□□□ -0.09
CLN6-203ENST00000563917 NKTRP30414 1462 aaKnown RBP14.47□□□□□ -0.09
CLN6-203ENST00000563917 C14orf37Q86TY3 774 aa14.47□□□□□ -0.09
CLN6-203ENST00000563917 ALKQ9UM73 1620 aa14.47□□□□□ -0.09
CLN6-203ENST00000563917 E9PCH4 1651 aa14.46□□□□□ -0.09
CLN6-203ENST00000563917 TBX22Q9Y458 520 aa14.46□□□□□ -0.09
CLN6-203ENST00000563917 ZFYVE9O95405 1425 aa14.46□□□□□ -0.09
CLN6-203ENST00000563917 TMEM131LA2VDJ0 1609 aa14.45□□□□□ -0.1
CLN6-203ENST00000563917 FAM135BQ49AJ0 1406 aa14.44□□□□□ -0.1
CLN6-203ENST00000563917 XIRP1Q702N8 1843 aaKnown RBP14.44□□□□□ -0.1
CLN6-203ENST00000563917 MYO5BQ9ULV0 1848 aa14.44□□□□□ -0.1
CLN6-203ENST00000563917 ZNF326Q5BKZ1 582 aaKnown RBP14.44□□□□□ -0.1
CLN6-203ENST00000563917 RBM33Q96EV2 1170 aaKnown RBP14.44□□□□□ -0.1
CLN6-203ENST00000563917 NUTM2DQ5VT03 806 aaPredicted RBP14.43□□□□□ -0.1
CLN6-203ENST00000563917 NWD1Q149M9 1564 aa14.43□□□□□ -0.1
CLN6-203ENST00000563917 PIK3R4Q99570 1358 aa14.4□□□□□ -0.1
CLN6-203ENST00000563917 SLAIN2Q9P270 581 aa14.4□□□□□ -0.1
CLN6-203ENST00000563917 DIP2AQ14689 1571 aa14.39□□□□□ -0.11
CLN6-203ENST00000563917 ATF3P18847 181 aa14.39□□□□□ -0.11
CLN6-203ENST00000563917 TRIM52Q96A61 297 aa14.39□□□□□ -0.11
CLN6-203ENST00000563917 RRBP1Q9P2E9 1410 aaKnown RBP14.39□□□□□ -0.11
CLN6-203ENST00000563917 NCOA3Q9Y6Q9 1424 aa14.39□□□□□ -0.11
CLN6-203ENST00000563917 CHD2O14647 1828 aaKnown RBP14.38□□□□□ -0.11
CLN6-203ENST00000563917 CADPS2Q86UW7 1296 aa14.38□□□□□ -0.11
CLN6-203ENST00000563917 TRPM2O94759 1503 aa14.37□□□□□ -0.11
CLN6-203ENST00000563917 ROBO1Q9Y6N7 1651 aa14.37□□□□□ -0.11
CLN6-203ENST00000563917 SPHKAPQ2M3C7 1700 aa14.37□□□□□ -0.11
CLN6-203ENST00000563917 C19orf44Q9H6X5 657 aa14.36□□□□□ -0.11
CLN6-203ENST00000563917 ADAMTS13Q76LX8 1427 aa14.35□□□□□ -0.11
CLN6-203ENST00000563917 AMOTL2Q9Y2J4 779 aa14.35□□□□□ -0.11
CLN6-203ENST00000563917 NAIPQ13075 1403 aa14.34□□□□□ -0.11
CLN6-203ENST00000563917 SLC4A1APQ9BWU0 796 aaKnown RBP14.33□□□□□ -0.12
CLN6-203ENST00000563917 JCADQ9P266 1359 aa14.31□□□□□ -0.12
CLN6-203ENST00000563917 HFM1A2PYH4 1435 aa14.31□□□□□ -0.12
CLN6-203ENST00000563917 PHLPP1O60346 1717 aa14.3□□□□□ -0.12
CLN6-203ENST00000563917 VGFO15240 615 aaPredicted RBP14.3□□□□□ -0.12
CLN6-203ENST00000563917 KIF1BO60333 1816 aa14.29□□□□□ -0.12
CLN6-203ENST00000563917 SETBP1Q9Y6X0 1596 aa14.29□□□□□ -0.12
CLN6-203ENST00000563917 MEX3CQ5U5Q3 659 aaKnown RBP14.28□□□□□ -0.12
CLN6-203ENST00000563917 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.28□□□□□ -0.12
CLN6-203ENST00000563917 CLTCL1P53675 1640 aa14.27□□□□□ -0.12
CLN6-203ENST00000563917 RPGRIP1LQ68CZ1 1315 aa14.27□□□□□ -0.12
CLN6-203ENST00000563917 DCCP43146 1447 aa14.26□□□□□ -0.13
CLN6-203ENST00000563917 PTPRUQ92729 1446 aa14.26□□□□□ -0.13
CLN6-203ENST00000563917 SPATA31A6Q5VVP1 1343 aa14.25□□□□□ -0.13
CLN6-203ENST00000563917 ACIN1Q9UKV3 1341 aaKnown RBP14.25□□□□□ -0.13
CLN6-203ENST00000563917 RGS17Q9UGC6 210 aaPredicted RBP14.25□□□□□ -0.13
CLN6-203ENST00000563917 NEXMIFQ5QGS0 1516 aa14.25□□□□□ -0.13
CLN6-203ENST00000563917 METP08581 1390 aa14.24□□□□□ -0.13
CLN6-203ENST00000563917 NRXN3Q9Y4C0 1643 aa14.23□□□□□ -0.13
CLN6-203ENST00000563917 BRINP3Q76B58 766 aa14.23□□□□□ -0.13
CLN6-203ENST00000563917 XRN1Q8IZH2 1706 aaKnown RBP14.23□□□□□ -0.13
CLN6-203ENST00000563917 COL16A1Q07092 1604 aaPredicted RBP14.22□□□□□ -0.13
CLN6-203ENST00000563917 AHDC1Q5TGY3 1603 aaPredicted RBP14.21□□□□□ -0.13
CLN6-203ENST00000563917 CCDC144AA2RUR9 1427 aa14.21□□□□□ -0.13
CLN6-203ENST00000563917 ADGRL3Q9HAR2 1447 aa14.21□□□□□ -0.13
CLN6-203ENST00000563917 ZNF772Q68DY9 489 aaPredicted RBP14.2□□□□□ -0.14
CLN6-203ENST00000563917 POTEAQ6S8J7 498 aa14.2□□□□□ -0.14
CLN6-203ENST00000563917 LRRC59Q96AG4 307 aaKnown RBP14.2□□□□□ -0.14
CLN6-203ENST00000563917 MST1RQ04912 1400 aa14.18□□□□□ -0.14
CLN6-203ENST00000563917 NUTM2BA6NNL0 878 aaPredicted RBP14.18□□□□□ -0.14
CLN6-203ENST00000563917 NUTM2EB1AL46 878 aaPredicted RBP14.18□□□□□ -0.14
CLN6-203ENST00000563917 FOXD1Q16676 465 aa14.18□□□□□ -0.14
CLN6-203ENST00000563917 RGL3Q3MIN7 710 aa14.18□□□□□ -0.14
CLN6-203ENST00000563917 NUTM2AQ8IVF1 878 aaPredicted RBP14.18□□□□□ -0.14
CLN6-203ENST00000563917 MPHOSPH9Q99550 1183 aa14.18□□□□□ -0.14
CLN6-203ENST00000563917 ASXL1Q8IXJ9 1541 aa14.18□□□□□ -0.14
CLN6-203ENST00000563917 PTCH1Q13635 1447 aa14.17□□□□□ -0.14
CLN6-203ENST00000563917 SHPRHQ149N8 1683 aa14.17□□□□□ -0.14
CLN6-203ENST00000563917 ANKRD30BQ9BXX2 1392 aa14.15□□□□□ -0.14
CLN6-203ENST00000563917 SETD5Q9C0A6 1442 aa14.15□□□□□ -0.14
CLN6-203ENST00000563917 PPLO60437 1756 aa14.14□□□□□ -0.15
CLN6-203ENST00000563917 NALCNQ8IZF0 1738 aa14.13□□□□□ -0.15
CLN6-203ENST00000563917 ROBO2Q9HCK4 1378 aa14.13□□□□□ -0.15
CLN6-203ENST00000563917 C1orf167Q5SNV9 1468 aa14.12□□□□□ -0.15
CLN6-203ENST00000563917 LRP6O75581 1613 aa14.12□□□□□ -0.15
CLN6-203ENST00000563917 NHSL1Q5SYE7 1610 aa14.12□□□□□ -0.15
CLN6-203ENST00000563917 RXRBP28702 533 aa14.11□□□□□ -0.15
CLN6-203ENST00000563917 STK26Q9P289 416 aa14.11□□□□□ -0.15
CLN6-203ENST00000563917 PRAG1Q86YV5 1406 aa14.1□□□□□ -0.15
CLN6-203ENST00000563917 DDX17Q92841 729 aaKnown RBP14.1□□□□□ -0.15
CLN6-203ENST00000563917 ADGRF5Q8IZF2 1346 aa14.1□□□□□ -0.15
CLN6-203ENST00000563917 SETD1AO15047 1707 aaKnown RBP14.1□□□□□ -0.15
CLN6-203ENST00000563917 ESCO1Q5FWF5 840 aa14.09□□□□□ -0.15
CLN6-203ENST00000563917 C8orf37Q96NL8 207 aa14.09□□□□□ -0.15
CLN6-203ENST00000563917 ORAI2Q96SN7 254 aa14.09□□□□□ -0.15
CLN6-203ENST00000563917 AFF2P51816 1311 aa14.09□□□□□ -0.15
CLN6-203ENST00000563917 NPHP3Q7Z494 1330 aa14.08□□□□□ -0.16
CLN6-203ENST00000563917 PNPLA6Q8IY17 1366 aa14.08□□□□□ -0.16
CLN6-203ENST00000563917 SPATA31E1Q6ZUB1 1445 aa14.07□□□□□ -0.16
CLN6-203ENST00000563917 NGLY1Q96IV0 654 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms