RNA–Protein interactions for RNA: ENST00000563670.1

HERC2-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 5

Gene HERC2, Length 618 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-203ENST00000563670 NCOA2Q15596 1464 aa13.11□□□□□ -0.31
HERC2-203ENST00000563670 ATXN8OSP0DMR3 200 aa13.11□□□□□ -0.31
HERC2-203ENST00000563670 KANK4Q5T7N3 995 aaPredicted RBP13.11□□□□□ -0.31
HERC2-203ENST00000563670 TXNDC2Q86VQ3 553 aa13.11□□□□□ -0.31
HERC2-203ENST00000563670 HNRNPMP52272 730 aaKnown RBP eCLIP13.1□□□□□ -0.31
HERC2-203ENST00000563670 UBR1Q8IWV7 1749 aa13.1□□□□□ -0.31
HERC2-203ENST00000563670 WASHC2CQ9Y4E1 1318 aa13.1□□□□□ -0.31
HERC2-203ENST00000563670 DHX29Q7Z478 1369 aaKnown RBP13.09□□□□□ -0.31
HERC2-203ENST00000563670 BCL9LQ86UU0 1499 aa13.08□□□□□ -0.32
HERC2-203ENST00000563670 PLEKHH2Q8IVE3 1493 aa13.08□□□□□ -0.32
HERC2-203ENST00000563670 BLMP54132 1417 aaPredicted RBP13.07□□□□□ -0.32
HERC2-203ENST00000563670 HRCP23327 699 aa13.07□□□□□ -0.32
HERC2-203ENST00000563670 CFDP1Q9UEE9 299 aaPredicted RBP13.07□□□□□ -0.32
HERC2-203ENST00000563670 ZNF777Q9ULD5 760 aaPredicted RBP13.07□□□□□ -0.32
HERC2-203ENST00000563670 KDM5AP29375 1690 aaKnown RBP13.07□□□□□ -0.32
HERC2-203ENST00000563670 SENP3-EIF4A1A0A087X0R7 540 aa13.06□□□□□ -0.32
HERC2-203ENST00000563670 DCAF8L1A6NGE4 600 aa13.06□□□□□ -0.32
HERC2-203ENST00000563670 C8orf37Q96NL8 207 aa13.06□□□□□ -0.32
HERC2-203ENST00000563670 GPATCH8Q9UKJ3 1502 aaKnown RBP13.06□□□□□ -0.32
HERC2-203ENST00000563670 EID1Q9Y6B2 187 aa13.05□□□□□ -0.32
HERC2-203ENST00000563670 RTEL1-TNFRSF6BF6WH68 1400 aa13.05□□□□□ -0.32
HERC2-203ENST00000563670 SETD5Q9C0A6 1442 aa13.05□□□□□ -0.32
HERC2-203ENST00000563670 ERVK-7P63135 1459 aa13.04□□□□□ -0.32
HERC2-203ENST00000563670 KIF3BO15066 747 aa13.04□□□□□ -0.32
HERC2-203ENST00000563670 PPARGC1BQ86YN6 1023 aaKnown RBP13.03□□□□□ -0.32
HERC2-203ENST00000563670 NCOA3Q9Y6Q9 1424 aa13.03□□□□□ -0.32
HERC2-203ENST00000563670 CAMSAP2Q08AD1 1489 aa13.03□□□□□ -0.32
HERC2-203ENST00000563670 TET3O43151 1660 aa13.02□□□□□ -0.32
HERC2-203ENST00000563670 TRPC5Q9UL62 973 aaPredicted RBP13.01□□□□□ -0.33
HERC2-203ENST00000563670 MYOM3Q5VTT5 1437 aa13.01□□□□□ -0.33
HERC2-203ENST00000563670 TMEM2Q9UHN6 1383 aa13□□□□□ -0.33
HERC2-203ENST00000563670 DEFB132Q7Z7B7 95 aa12.99□□□□□ -0.33
HERC2-203ENST00000563670 ATRNO75882 1429 aa12.98□□□□□ -0.33
HERC2-203ENST00000563670 CADPS2Q86UW7 1296 aa12.98□□□□□ -0.33
HERC2-203ENST00000563670 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.98□□□□□ -0.33
HERC2-203ENST00000563670 PSDA5PKW4 1024 aaPredicted RBP12.97□□□□□ -0.33
HERC2-203ENST00000563670 MAST1Q9Y2H9 1570 aa12.97□□□□□ -0.33
HERC2-203ENST00000563670 MROH1Q8NDA8 1641 aa12.96□□□□□ -0.33
HERC2-203ENST00000563670 PTPN23Q9H3S7 1636 aa12.96□□□□□ -0.33
HERC2-203ENST00000563670 BRINP3Q76B58 766 aa12.96□□□□□ -0.33
HERC2-203ENST00000563670 SLC26A8Q96RN1 970 aa12.96□□□□□ -0.33
HERC2-203ENST00000563670 USP21Q9UK80 565 aa12.96□□□□□ -0.33
HERC2-203ENST00000563670 C1QTNF8P60827 252 aa12.95□□□□□ -0.34
HERC2-203ENST00000563670 RSPH4AQ5TD94 716 aa12.95□□□□□ -0.34
HERC2-203ENST00000563670 FNBP4Q8N3X1 1017 aaPredicted RBP12.95□□□□□ -0.34
HERC2-203ENST00000563670 LRRC59Q96AG4 307 aaKnown RBP12.95□□□□□ -0.34
HERC2-203ENST00000563670 PNPLA6Q8IY17 1366 aa12.94□□□□□ -0.34
HERC2-203ENST00000563670 UNC13BO14795 1591 aa12.94□□□□□ -0.34
HERC2-203ENST00000563670 ZNF644Q9H582 1327 aaPredicted RBP12.94□□□□□ -0.34
HERC2-203ENST00000563670 MBD5Q9P267 1494 aa12.93□□□□□ -0.34
HERC2-203ENST00000563670 SF3B2Q13435 895 aaKnown RBP12.93□□□□□ -0.34
HERC2-203ENST00000563670 FAM50AQ14320 339 aaKnown RBP12.93□□□□□ -0.34
HERC2-203ENST00000563670 TSPY4P0CV99 314 aa12.92□□□□□ -0.34
HERC2-203ENST00000563670 TSPY10P0CW01 314 aa12.92□□□□□ -0.34
HERC2-203ENST00000563670 ZNF784Q8NCA9 323 aaPredicted RBP12.92□□□□□ -0.34
HERC2-203ENST00000563670 C19orf44Q9H6X5 657 aa12.92□□□□□ -0.34
HERC2-203ENST00000563670 ASXL1Q8IXJ9 1541 aa12.92□□□□□ -0.34
HERC2-203ENST00000563670 ATF3P18847 181 aa12.91□□□□□ -0.34
HERC2-203ENST00000563670 CEP350Q5VT06 3117 aa12.91□□□□□ -0.34
HERC2-203ENST00000563670 ARHGEF5Q12774 1597 aa12.9□□□□□ -0.34
HERC2-203ENST00000563670 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.9□□□□□ -0.34
HERC2-203ENST00000563670 CCDC141Q6ZP82 1450 aa12.9□□□□□ -0.34
HERC2-203ENST00000563670 ADAMTS2O95450 1211 aa12.89□□□□□ -0.35
HERC2-203ENST00000563670 PTCH1Q13635 1447 aa12.88□□□□□ -0.35
HERC2-203ENST00000563670 SPHKAPQ2M3C7 1700 aa12.88□□□□□ -0.35
HERC2-203ENST00000563670 PIK3C2BO00750 1634 aa12.87□□□□□ -0.35
HERC2-203ENST00000563670 EFCAB6Q5THR3 1501 aa12.87□□□□□ -0.35
HERC2-203ENST00000563670 CROCC2H7BZ55 1655 aa12.86□□□□□ -0.35
HERC2-203ENST00000563670 CHD2O14647 1828 aaKnown RBP12.86□□□□□ -0.35
HERC2-203ENST00000563670 DCCP43146 1447 aa12.86□□□□□ -0.35
HERC2-203ENST00000563670 C14orf37Q86TY3 774 aa12.85□□□□□ -0.35
HERC2-203ENST00000563670 GJD4Q96KN9 370 aaPredicted RBP12.85□□□□□ -0.35
HERC2-203ENST00000563670 ARHGAP31Q2M1Z3 1444 aa12.85□□□□□ -0.35
HERC2-203ENST00000563670 SAMD1Q6SPF0 538 aaPredicted RBP12.84□□□□□ -0.35
HERC2-203ENST00000563670 DAPK1P53355 1430 aa12.84□□□□□ -0.35
HERC2-203ENST00000563670 ITGAEP38570 1179 aa12.83□□□□□ -0.36
HERC2-203ENST00000563670 BAG6P46379 1132 aa12.83□□□□□ -0.36
HERC2-203ENST00000563670 R3HDM1Q15032 1099 aaKnown RBP12.83□□□□□ -0.36
HERC2-203ENST00000563670 RRBP1Q9P2E9 1410 aaKnown RBP12.82□□□□□ -0.36
HERC2-203ENST00000563670 NINLQ9Y2I6 1382 aa12.81□□□□□ -0.36
HERC2-203ENST00000563670 ABCC5O15440 1437 aa12.81□□□□□ -0.36
HERC2-203ENST00000563670 STAG3Q9UJ98 1225 aa12.81□□□□□ -0.36
HERC2-203ENST00000563670 CHIC2Q9UKJ5 165 aa12.81□□□□□ -0.36
HERC2-203ENST00000563670 MST1RQ04912 1400 aa12.8□□□□□ -0.36
HERC2-203ENST00000563670 RALGAPBQ86X10 1494 aa12.8□□□□□ -0.36
HERC2-203ENST00000563670 ANKRD30AQ9BXX3 1397 aa12.79□□□□□ -0.36
HERC2-203ENST00000563670 PLEKHG1Q9ULL1 1385 aa12.79□□□□□ -0.36
HERC2-203ENST00000563670 SLC34A2O95436 690 aa12.78□□□□□ -0.36
HERC2-203ENST00000563670 EIF2AK4Q9P2K8 1649 aaKnown RBP12.77□□□□□ -0.36
HERC2-203ENST00000563670 TBX22Q9Y458 520 aa12.77□□□□□ -0.37
HERC2-203ENST00000563670 U3KPZ7 1027 aaPredicted RBP12.77□□□□□ -0.37
HERC2-203ENST00000563670 GLI3P10071 1580 aa12.77□□□□□ -0.37
HERC2-203ENST00000563670 BCANQ96GW7 911 aa12.76□□□□□ -0.37
HERC2-203ENST00000563670 RRP7BPQ9NSQ0 103 aa12.76□□□□□ -0.37
HERC2-203ENST00000563670 PIK3R4Q99570 1358 aa12.76□□□□□ -0.37
HERC2-203ENST00000563670 UTRNP46939 3433 aa12.76□□□□□ -0.37
HERC2-203ENST00000563670 DISP2A7MBM2 1401 aa12.75□□□□□ -0.37
HERC2-203ENST00000563670 PPP1R15AO75807 674 aaPredicted RBP12.75□□□□□ -0.37
HERC2-203ENST00000563670 CEP152O94986 1710 aa12.75□□□□□ -0.37
HERC2-203ENST00000563670 LAMC1P11047 1609 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms