RNA–Protein interactions for RNA: ENST00000563668.5

SPSB3-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,509 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-202ENST00000563668 SLC26A8Q96RN1 970 aa25.45■■□□□ 1.66
SPSB3-202ENST00000563668 RIMS2Q9UQ26 1411 aa25.44■■□□□ 1.66
SPSB3-202ENST00000563668 SLC4A1APQ9BWU0 796 aaKnown RBP25.43■■□□□ 1.66
SPSB3-202ENST00000563668 CPS1P31327 1500 aa25.43■■□□□ 1.66
SPSB3-202ENST00000563668 FOXD1Q16676 465 aa25.41■■□□□ 1.66
SPSB3-202ENST00000563668 CLTCL1P53675 1640 aa25.38■■□□□ 1.65
SPSB3-202ENST00000563668 UBAP1LF5GYI3 381 aa25.37■■□□□ 1.65
SPSB3-202ENST00000563668 TRPM2O94759 1503 aa25.37■■□□□ 1.65
SPSB3-202ENST00000563668 LRRC7Q96NW7 1537 aa25.37■■□□□ 1.65
SPSB3-202ENST00000563668 BCANQ96GW7 911 aa25.37■■□□□ 1.65
SPSB3-202ENST00000563668 SETD5Q9C0A6 1442 aa25.36■■□□□ 1.65
SPSB3-202ENST00000563668 PPP1R15AO75807 674 aaPredicted RBP25.36■■□□□ 1.65
SPSB3-202ENST00000563668 PLEKHG1Q9ULL1 1385 aa25.35■■□□□ 1.65
SPSB3-202ENST00000563668 MPHOSPH9Q99550 1183 aa25.33■■□□□ 1.65
SPSB3-202ENST00000563668 HDGFP51858 240 aaKnown RBP25.32■■□□□ 1.64
SPSB3-202ENST00000563668 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.32■■□□□ 1.64
SPSB3-202ENST00000563668 ZNF326Q5BKZ1 582 aaKnown RBP25.3■■□□□ 1.64
SPSB3-202ENST00000563668 RAB3GAP2Q9H2M9 1393 aa25.3■■□□□ 1.64
SPSB3-202ENST00000563668 KCNA6P17658 529 aa25.29■■□□□ 1.64
SPSB3-202ENST00000563668 RBM33Q96EV2 1170 aaKnown RBP25.29■■□□□ 1.64
SPSB3-202ENST00000563668 ADAMTS13Q76LX8 1427 aa25.28■■□□□ 1.64
SPSB3-202ENST00000563668 ALKQ9UM73 1620 aa25.28■■□□□ 1.64
SPSB3-202ENST00000563668 XIRP1Q702N8 1843 aaKnown RBP25.26■■□□□ 1.63
SPSB3-202ENST00000563668 TBX22Q9Y458 520 aa25.26■■□□□ 1.63
SPSB3-202ENST00000563668 PIP4K2BP78356 416 aa25.25■■□□□ 1.63
SPSB3-202ENST00000563668 KIF1BO60333 1816 aa25.23■■□□□ 1.63
SPSB3-202ENST00000563668 NEXMIFQ5QGS0 1516 aa25.23■■□□□ 1.63
SPSB3-202ENST00000563668 TOM1O60784 492 aa25.22■■□□□ 1.63
SPSB3-202ENST00000563668 TMEM94Q12767 1356 aa25.21■■□□□ 1.63
SPSB3-202ENST00000563668 NWD1Q149M9 1564 aa25.21■■□□□ 1.63
SPSB3-202ENST00000563668 PROSER2Q86WR7 435 aaPredicted RBP25.21■■□□□ 1.63
SPSB3-202ENST00000563668 SCAF1Q9H7N4 1312 aaKnown RBP25.21■■□□□ 1.63
SPSB3-202ENST00000563668 NRXN3Q9Y4C0 1643 aa25.2■■□□□ 1.63
SPSB3-202ENST00000563668 CHD2O14647 1828 aaKnown RBP25.2■■□□□ 1.62
SPSB3-202ENST00000563668 ZEB1P37275 1124 aaPredicted RBP25.17■■□□□ 1.62
SPSB3-202ENST00000563668 PTPRUQ92729 1446 aa25.16■■□□□ 1.62
SPSB3-202ENST00000563668 SETBP1Q9Y6X0 1596 aa25.15■■□□□ 1.62
SPSB3-202ENST00000563668 NKTRP30414 1462 aaKnown RBP25.15■■□□□ 1.62
SPSB3-202ENST00000563668 CCDC144AA2RUR9 1427 aa25.15■■□□□ 1.62
SPSB3-202ENST00000563668 DIP2AQ14689 1571 aa25.14■■□□□ 1.62
SPSB3-202ENST00000563668 METP08581 1390 aa25.13■■□□□ 1.61
SPSB3-202ENST00000563668 RGL3Q3MIN7 710 aa25.13■■□□□ 1.61
SPSB3-202ENST00000563668 AMOTL2Q9Y2J4 779 aa25.12■■□□□ 1.61
SPSB3-202ENST00000563668 SPATA31E1Q6ZUB1 1445 aa25.12■■□□□ 1.61
SPSB3-202ENST00000563668 ACIN1Q9UKV3 1341 aaKnown RBP25.12■■□□□ 1.61
SPSB3-202ENST00000563668 HSPA1LP34931 641 aa25.12■■□□□ 1.61
SPSB3-202ENST00000563668 PIK3R4Q99570 1358 aa25.1■■□□□ 1.61
SPSB3-202ENST00000563668 RPGRIP1LQ68CZ1 1315 aa25.09■■□□□ 1.61
SPSB3-202ENST00000563668 VGFO15240 615 aaPredicted RBP25.09■■□□□ 1.61
SPSB3-202ENST00000563668 PPLO60437 1756 aa25.08■■□□□ 1.61
SPSB3-202ENST00000563668 ADGRF5Q8IZF2 1346 aa25.05■■□□□ 1.6
SPSB3-202ENST00000563668 XRN1Q8IZH2 1706 aaKnown RBP25.03■■□□□ 1.6
SPSB3-202ENST00000563668 ANKRD30BQ9BXX2 1392 aa25.03■■□□□ 1.6
SPSB3-202ENST00000563668 SETD1AO15047 1707 aaKnown RBP25.02■■□□□ 1.6
SPSB3-202ENST00000563668 MSH6P52701 1360 aa25.01■■□□□ 1.59
SPSB3-202ENST00000563668 IFT172Q9UG01 1749 aa24.99■■□□□ 1.59
SPSB3-202ENST00000563668 C14orf37Q86TY3 774 aa24.98■■□□□ 1.59
SPSB3-202ENST00000563668 NCOA3Q9Y6Q9 1424 aa24.97■■□□□ 1.59
SPSB3-202ENST00000563668 SLAIN2Q9P270 581 aa24.96■■□□□ 1.59
SPSB3-202ENST00000563668 FAM135BQ49AJ0 1406 aa24.96■■□□□ 1.59
SPSB3-202ENST00000563668 C19orf44Q9H6X5 657 aa24.95■■□□□ 1.58
SPSB3-202ENST00000563668 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.95■■□□□ 1.58
SPSB3-202ENST00000563668 ROBO1Q9Y6N7 1651 aa24.92■■□□□ 1.58
SPSB3-202ENST00000563668 ROBO2Q9HCK4 1378 aa24.92■■□□□ 1.58
SPSB3-202ENST00000563668 PIK3C2GO75747 1445 aa24.9■■□□□ 1.58
SPSB3-202ENST00000563668 TMEM132EQ6IEE7 984 aa24.9■■□□□ 1.58
SPSB3-202ENST00000563668 CCER1Q8TC90 406 aaPredicted RBP24.89■■□□□ 1.57
SPSB3-202ENST00000563668 ATF3P18847 181 aa24.88■■□□□ 1.57
SPSB3-202ENST00000563668 DISP3Q9P2K9 1392 aa24.88■■□□□ 1.57
SPSB3-202ENST00000563668 ASXL1Q8IXJ9 1541 aa24.88■■□□□ 1.57
SPSB3-202ENST00000563668 CADPS2Q86UW7 1296 aa24.87■■□□□ 1.57
SPSB3-202ENST00000563668 STK26Q9P289 416 aa24.86■■□□□ 1.57
SPSB3-202ENST00000563668 NRXN1Q9ULB1 1477 aa24.85■■□□□ 1.57
SPSB3-202ENST00000563668 PTCH1Q13635 1447 aa24.85■■□□□ 1.57
SPSB3-202ENST00000563668 CFAP70Q5T0N1 1121 aa24.85■■□□□ 1.57
SPSB3-202ENST00000563668 NALCNQ8IZF0 1738 aa24.84■■□□□ 1.57
SPSB3-202ENST00000563668 C14orf93Q9H972 538 aaKnown RBP24.84■■□□□ 1.57
SPSB3-202ENST00000563668 PRAG1Q86YV5 1406 aa24.84■■□□□ 1.57
SPSB3-202ENST00000563668 ADGRL3Q9HAR2 1447 aa24.84■■□□□ 1.57
SPSB3-202ENST00000563668 MYOM2P54296 1465 aa24.83■■□□□ 1.57
SPSB3-202ENST00000563668 KDM2AQ9Y2K7 1162 aa24.83■■□□□ 1.57
SPSB3-202ENST00000563668 DHX57Q6P158 1386 aaKnown RBP24.82■■□□□ 1.56
SPSB3-202ENST00000563668 WAPLQ7Z5K2 1190 aa24.81■■□□□ 1.56
SPSB3-202ENST00000563668 DCAF11Q8TEB1 546 aa24.81■■□□□ 1.56
SPSB3-202ENST00000563668 DCCP43146 1447 aa24.81■■□□□ 1.56
SPSB3-202ENST00000563668 MST1RQ04912 1400 aa24.8■■□□□ 1.56
SPSB3-202ENST00000563668 LRPPRCP42704 1394 aaKnown RBP24.79■■□□□ 1.56
SPSB3-202ENST00000563668 BRINP3Q76B58 766 aa24.79■■□□□ 1.56
SPSB3-202ENST00000563668 MED1Q15648 1581 aaPredicted RBP24.77■■□□□ 1.56
SPSB3-202ENST00000563668 ABCC11Q96J66 1382 aa24.77■■□□□ 1.56
SPSB3-202ENST00000563668 PLEKHH1Q9ULM0 1364 aa24.77■■□□□ 1.56
SPSB3-202ENST00000563668 YTHDC2Q9H6S0 1430 aaKnown RBP24.77■■□□□ 1.56
SPSB3-202ENST00000563668 ILDR2Q71H61 639 aa24.76■■□□□ 1.55
SPSB3-202ENST00000563668 TECPR2O15040 1411 aa24.76■■□□□ 1.55
SPSB3-202ENST00000563668 PHLPP1O60346 1717 aa24.75■■□□□ 1.55
SPSB3-202ENST00000563668 DDX17Q92841 729 aaKnown RBP24.71■■□□□ 1.55
SPSB3-202ENST00000563668 COL16A1Q07092 1604 aaPredicted RBP24.71■■□□□ 1.55
SPSB3-202ENST00000563668 KNDC1Q76NI1 1749 aa24.71■■□□□ 1.55
SPSB3-202ENST00000563668 SIN3AQ96ST3 1273 aa24.71■■□□□ 1.55
SPSB3-202ENST00000563668 LAMC1P11047 1609 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms