RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 MROH1Q8NDA8 1641 aa13.9□□□□□ -0.19
UBFD1-202ENST00000563366 ATP10AO60312 1499 aa13.89□□□□□ -0.19
UBFD1-202ENST00000563366 SPHKAPQ2M3C7 1700 aa13.89□□□□□ -0.19
UBFD1-202ENST00000563366 E9PCH4 1651 aa13.88□□□□□ -0.19
UBFD1-202ENST00000563366 ZNF316A6NFI3 1004 aaPredicted RBP13.88□□□□□ -0.19
UBFD1-202ENST00000563366 LMTK2Q8IWU2 1503 aa13.88□□□□□ -0.19
UBFD1-202ENST00000563366 PPP1R15AO75807 674 aaPredicted RBP13.87□□□□□ -0.19
UBFD1-202ENST00000563366 PRKAR2AP13861 404 aaKnown RBP13.87□□□□□ -0.19
UBFD1-202ENST00000563366 CHGAP10645 457 aaKnown RBP13.86□□□□□ -0.19
UBFD1-202ENST00000563366 FARP1Q9Y4F1 1045 aaPredicted RBP13.86□□□□□ -0.19
UBFD1-202ENST00000563366 CCDC144AA2RUR9 1427 aa13.86□□□□□ -0.19
UBFD1-202ENST00000563366 EFCAB6Q5THR3 1501 aa13.85□□□□□ -0.19
UBFD1-202ENST00000563366 CEP152O94986 1710 aa13.85□□□□□ -0.19
UBFD1-202ENST00000563366 KIF3BO15066 747 aa13.85□□□□□ -0.19
UBFD1-202ENST00000563366 TRPM2O94759 1503 aa13.85□□□□□ -0.19
UBFD1-202ENST00000563366 RAPGEF3O95398 923 aa13.84□□□□□ -0.19
UBFD1-202ENST00000563366 FXR2P51116 673 aaKnown RBP eCLIP13.84□□□□□ -0.19
UBFD1-202ENST00000563366 RNF25Q96BH1 459 aaPredicted RBP13.84□□□□□ -0.19
UBFD1-202ENST00000563366 CHRDL2Q6WN34 429 aa13.83□□□□□ -0.2
UBFD1-202ENST00000563366 TAOK2Q9UL54 1235 aa13.83□□□□□ -0.2
UBFD1-202ENST00000563366 ARHGEF40Q8TER5 1519 aa13.83□□□□□ -0.2
UBFD1-202ENST00000563366 RIOK3O14730 519 aaKnown RBP13.82□□□□□ -0.2
UBFD1-202ENST00000563366 HAP1P54257 671 aaPredicted RBP13.82□□□□□ -0.2
UBFD1-202ENST00000563366 AGLP35573 1532 aa13.81□□□□□ -0.2
UBFD1-202ENST00000563366 NEURL4Q96JN8 1562 aa13.81□□□□□ -0.2
UBFD1-202ENST00000563366 CHRM1P11229 460 aaPredicted RBP13.81□□□□□ -0.2
UBFD1-202ENST00000563366 CAMSAP1Q5T5Y3 1602 aa13.81□□□□□ -0.2
UBFD1-202ENST00000563366 YEATS2Q9ULM3 1422 aa13.8□□□□□ -0.2
UBFD1-202ENST00000563366 PTPRTO14522 1441 aa13.79□□□□□ -0.2
UBFD1-202ENST00000563366 ABCC3O15438 1527 aa13.79□□□□□ -0.2
UBFD1-202ENST00000563366 KIF1BO60333 1816 aa13.78□□□□□ -0.2
UBFD1-202ENST00000563366 PYGBP11216 843 aa13.78□□□□□ -0.2
UBFD1-202ENST00000563366 L3MBTL2Q969R5 705 aa13.78□□□□□ -0.2
UBFD1-202ENST00000563366 TSPYL2Q9H2G4 693 aaPredicted RBP13.78□□□□□ -0.2
UBFD1-202ENST00000563366 PLA2R1Q13018 1463 aa13.77□□□□□ -0.21
UBFD1-202ENST00000563366 PAXIP1Q6ZW49 1069 aaPredicted RBP13.77□□□□□ -0.21
UBFD1-202ENST00000563366 HS6ST3Q8IZP7 471 aa13.76□□□□□ -0.21
UBFD1-202ENST00000563366 DNAJC5Q9H3Z4 198 aa13.76□□□□□ -0.21
UBFD1-202ENST00000563366 CLTCL1P53675 1640 aa13.75□□□□□ -0.21
UBFD1-202ENST00000563366 UHRF1BP1Q6BDS2 1440 aa13.75□□□□□ -0.21
UBFD1-202ENST00000563366 PIP4P2Q8N4L2 257 aa13.75□□□□□ -0.21
UBFD1-202ENST00000563366 CFAP44Q96MT7 982 aa13.75□□□□□ -0.21
UBFD1-202ENST00000563366 ARHGAP31Q2M1Z3 1444 aa13.74□□□□□ -0.21
UBFD1-202ENST00000563366 CNTLNQ9NXG0 1405 aa13.73□□□□□ -0.21
UBFD1-202ENST00000563366 VGFO15240 615 aaPredicted RBP13.73□□□□□ -0.21
UBFD1-202ENST00000563366 STAC3Q96MF2 364 aa13.73□□□□□ -0.21
UBFD1-202ENST00000563366 WASHC2CQ9Y4E1 1318 aa13.72□□□□□ -0.21
UBFD1-202ENST00000563366 GGT6Q6P531 493 aa13.72□□□□□ -0.21
UBFD1-202ENST00000563366 RALGAPBQ86X10 1494 aa13.72□□□□□ -0.21
UBFD1-202ENST00000563366 POLR1AO95602 1720 aaPredicted RBP13.71□□□□□ -0.21
UBFD1-202ENST00000563366 DIEXFQ68CQ4 756 aaKnown RBP13.71□□□□□ -0.21
UBFD1-202ENST00000563366 SPRYD3Q8NCJ5 442 aa13.71□□□□□ -0.21
UBFD1-202ENST00000563366 COL17A1Q9UMD9 1497 aaPredicted RBP13.71□□□□□ -0.21
UBFD1-202ENST00000563366 NPATQ14207 1427 aa13.71□□□□□ -0.22
UBFD1-202ENST00000563366 LAMC1P11047 1609 aa13.7□□□□□ -0.22
UBFD1-202ENST00000563366 TRPM1Q7Z4N2 1603 aa13.7□□□□□ -0.22
UBFD1-202ENST00000563366 SPATA31E1Q6ZUB1 1445 aa13.7□□□□□ -0.22
UBFD1-202ENST00000563366 PREX1Q8TCU6 1659 aa13.69□□□□□ -0.22
UBFD1-202ENST00000563366 PIK3C2BO00750 1634 aa13.68□□□□□ -0.22
UBFD1-202ENST00000563366 IFT172Q9UG01 1749 aa13.68□□□□□ -0.22
UBFD1-202ENST00000563366 CLTCQ00610 1675 aaKnown RBP13.68□□□□□ -0.22
UBFD1-202ENST00000563366 SIGLEC1Q9BZZ2 1709 aa13.67□□□□□ -0.22
UBFD1-202ENST00000563366 STK25O00506 426 aa13.67□□□□□ -0.22
UBFD1-202ENST00000563366 PAK3O75914 559 aaPredicted RBP13.67□□□□□ -0.22
UBFD1-202ENST00000563366 EIF4G2P78344 907 aaKnown RBP eCLIP13.67□□□□□ -0.22
UBFD1-202ENST00000563366 ADGRB3O60242 1522 aa13.67□□□□□ -0.22
UBFD1-202ENST00000563366 KIAA1210Q9ULL0 1709 aa13.67□□□□□ -0.22
UBFD1-202ENST00000563366 NOS1P29475 1434 aa13.66□□□□□ -0.22
UBFD1-202ENST00000563366 PRAG1Q86YV5 1406 aa13.66□□□□□ -0.22
UBFD1-202ENST00000563366 DCAF11Q8TEB1 546 aa13.66□□□□□ -0.22
UBFD1-202ENST00000563366 CFAP65Q6ZU64 1925 aaKnown RBP13.66□□□□□ -0.22
UBFD1-202ENST00000563366 MROH2AA6NES4 1674 aa13.66□□□□□ -0.22
UBFD1-202ENST00000563366 MYOM2P54296 1465 aa13.65□□□□□ -0.22
UBFD1-202ENST00000563366 MADDQ8WXG6 1647 aa13.64□□□□□ -0.23
UBFD1-202ENST00000563366 SYNMO15061 1565 aa13.64□□□□□ -0.23
UBFD1-202ENST00000563366 NBPF8Q3BBV2 869 aa13.63□□□□□ -0.23
UBFD1-202ENST00000563366 SGIP1Q9BQI5 828 aa13.63□□□□□ -0.23
UBFD1-202ENST00000563366 PPLO60437 1756 aa13.63□□□□□ -0.23
UBFD1-202ENST00000563366 UGGT1Q9NYU2 1555 aa13.62□□□□□ -0.23
UBFD1-202ENST00000563366 ZNF326Q5BKZ1 582 aaKnown RBP13.62□□□□□ -0.23
UBFD1-202ENST00000563366 ZNF467Q7Z7K2 595 aaPredicted RBP13.62□□□□□ -0.23
UBFD1-202ENST00000563366 CCDC61Q9Y6R9 512 aa13.62□□□□□ -0.23
UBFD1-202ENST00000563366 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.61□□□□□ -0.23
UBFD1-202ENST00000563366 RGL3Q3MIN7 710 aa13.61□□□□□ -0.23
UBFD1-202ENST00000563366 ZFP91Q96JP5 570 aaPredicted RBP13.61□□□□□ -0.23
UBFD1-202ENST00000563366 ROCK2O75116 1388 aaKnown RBP13.6□□□□□ -0.23
UBFD1-202ENST00000563366 SPATA31D1Q6ZQQ2 1576 aa13.6□□□□□ -0.23
UBFD1-202ENST00000563366 ESF1Q9H501 851 aaKnown RBP13.6□□□□□ -0.23
UBFD1-202ENST00000563366 SLC52A1Q9NWF4 448 aa13.6□□□□□ -0.23
UBFD1-202ENST00000563366 ERVK-7P63135 1459 aa13.6□□□□□ -0.23
UBFD1-202ENST00000563366 GPRASP1Q5JY77 1395 aa13.59□□□□□ -0.23
UBFD1-202ENST00000563366 HSPA5P11021 654 aaKnown RBP13.59□□□□□ -0.23
UBFD1-202ENST00000563366 VSIG10Q8N0Z9 540 aa13.59□□□□□ -0.23
UBFD1-202ENST00000563366 BCL11BQ9C0K0 894 aaPredicted RBP13.59□□□□□ -0.23
UBFD1-202ENST00000563366 KDM2AQ9Y2K7 1162 aa13.59□□□□□ -0.23
UBFD1-202ENST00000563366 STK24Q9Y6E0 443 aa13.59□□□□□ -0.23
UBFD1-202ENST00000563366 USP47Q96K76 1375 aa13.58□□□□□ -0.23
UBFD1-202ENST00000563366 RPGRIP1LQ68CZ1 1315 aa13.58□□□□□ -0.24
UBFD1-202ENST00000563366 KDM5AP29375 1690 aaKnown RBP13.57□□□□□ -0.24
UBFD1-202ENST00000563366 CARD11Q9BXL7 1154 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms