RNA–Protein interactions for RNA: ENST00000563332.6

CDIP1-205, Transcript of cell death inducing p53 target 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDIP1, Length 2,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIP1-205ENST00000563332 LRPPRCP42704 1394 aaKnown RBP19.49■□□□□ 0.71
CDIP1-205ENST00000563332 TRAK1Q9UPV9 953 aa19.49■□□□□ 0.71
CDIP1-205ENST00000563332 ABCA6Q8N139 1617 aa19.49■□□□□ 0.71
CDIP1-205ENST00000563332 IQGAP1P46940 1657 aa19.48■□□□□ 0.71
CDIP1-205ENST00000563332 KNSTRNQ9Y448 316 aa19.48■□□□□ 0.71
CDIP1-205ENST00000563332 SMG6Q86US8 1419 aaKnown RBP19.47■□□□□ 0.71
CDIP1-205ENST00000563332 CDCA7LQ96GN5 454 aa19.47■□□□□ 0.71
CDIP1-205ENST00000563332 HECW2Q9P2P5 1572 aa19.46■□□□□ 0.71
CDIP1-205ENST00000563332 YEATS2Q9ULM3 1422 aa19.46■□□□□ 0.71
CDIP1-205ENST00000563332 KIF1BO60333 1816 aa19.44■□□□□ 0.7
CDIP1-205ENST00000563332 PPP4R2Q9NY27 417 aa19.44■□□□□ 0.7
CDIP1-205ENST00000563332 MLH3Q9UHC1 1453 aa19.43■□□□□ 0.7
CDIP1-205ENST00000563332 FAM69CQ0P6D2 419 aa19.43■□□□□ 0.7
CDIP1-205ENST00000563332 MAP3K4Q9Y6R4 1608 aa19.42■□□□□ 0.7
CDIP1-205ENST00000563332 SAFB2Q14151 953 aaKnown RBP eCLIP19.42■□□□□ 0.7
CDIP1-205ENST00000563332 AMER1Q5JTC6 1135 aaPredicted RBP19.42■□□□□ 0.7
CDIP1-205ENST00000563332 PPP2R1AP30153 589 aa19.41■□□□□ 0.7
CDIP1-205ENST00000563332 RBM19Q9Y4C8 960 aaKnown RBP19.41■□□□□ 0.7
CDIP1-205ENST00000563332 ADAMTS8Q9UP79 889 aa19.4■□□□□ 0.7
CDIP1-205ENST00000563332 ABCC3O15438 1527 aa19.39■□□□□ 0.69
CDIP1-205ENST00000563332 CFAP74Q9C0B2 1584 aa19.39■□□□□ 0.69
CDIP1-205ENST00000563332 EIF3AQ14152 1382 aaKnown RBP19.39■□□□□ 0.69
CDIP1-205ENST00000563332 TNNT2P45379 298 aaPredicted RBP19.38■□□□□ 0.69
CDIP1-205ENST00000563332 CARD14Q9BXL6 1004 aa19.38■□□□□ 0.69
CDIP1-205ENST00000563332 SIGLEC1Q9BZZ2 1709 aa19.37■□□□□ 0.69
CDIP1-205ENST00000563332 ERVK-7P63135 1459 aa19.37■□□□□ 0.69
CDIP1-205ENST00000563332 LMTK2Q8IWU2 1503 aa19.36■□□□□ 0.69
CDIP1-205ENST00000563332 FBXO31Q5XUX0 539 aaPredicted RBP19.36■□□□□ 0.69
CDIP1-205ENST00000563332 DIP2CQ9Y2E4 1556 aa19.36■□□□□ 0.69
CDIP1-205ENST00000563332 MYOM2P54296 1465 aa19.36■□□□□ 0.69
CDIP1-205ENST00000563332 IDI1Q13907 227 aa19.36■□□□□ 0.69
CDIP1-205ENST00000563332 CDCA8Q53HL2 280 aa19.36■□□□□ 0.69
CDIP1-205ENST00000563332 CCDC146Q8IYE0 955 aa19.36■□□□□ 0.69
CDIP1-205ENST00000563332 ADGRB3O60242 1522 aa19.36■□□□□ 0.69
CDIP1-205ENST00000563332 TSPOAP1O95153 1857 aa19.36■□□□□ 0.69
CDIP1-205ENST00000563332 MLECQ14165 292 aa19.35■□□□□ 0.69
CDIP1-205ENST00000563332 STK26Q9P289 416 aa19.35■□□□□ 0.69
CDIP1-205ENST00000563332 NEO1Q92859 1461 aa19.35■□□□□ 0.69
CDIP1-205ENST00000563332 STAC3Q96MF2 364 aa19.34■□□□□ 0.69
CDIP1-205ENST00000563332 MYOM1P52179 1685 aa19.34■□□□□ 0.69
CDIP1-205ENST00000563332 CENPJQ9HC77 1338 aaPredicted RBP19.34■□□□□ 0.69
CDIP1-205ENST00000563332 IFT172Q9UG01 1749 aa19.34■□□□□ 0.69
CDIP1-205ENST00000563332 SLC12A5Q9H2X9 1139 aa19.33■□□□□ 0.69
CDIP1-205ENST00000563332 PLIN1O60240 522 aa19.32■□□□□ 0.68
CDIP1-205ENST00000563332 C14orf93Q9H972 538 aaKnown RBP19.32■□□□□ 0.68
CDIP1-205ENST00000563332 CAMSAP1Q5T5Y3 1602 aa19.31■□□□□ 0.68
CDIP1-205ENST00000563332 WDR43Q15061 677 aaKnown RBP eCLIP19.31■□□□□ 0.68
CDIP1-205ENST00000563332 SYNMO15061 1565 aa19.3■□□□□ 0.68
CDIP1-205ENST00000563332 RICTORQ6R327 1708 aa19.3■□□□□ 0.68
CDIP1-205ENST00000563332 RIMBP3CA6NJZ7 1639 aa19.3■□□□□ 0.68
CDIP1-205ENST00000563332 RIMBP3BA6NNM3 1639 aa19.3■□□□□ 0.68
CDIP1-205ENST00000563332 RIMBP3Q9UFD9 1639 aa19.3■□□□□ 0.68
CDIP1-205ENST00000563332 RCAN3Q9UKA8 241 aa19.3■□□□□ 0.68
CDIP1-205ENST00000563332 PIK3C2GO75747 1445 aa19.3■□□□□ 0.68
CDIP1-205ENST00000563332 KDM5AP29375 1690 aaKnown RBP19.3■□□□□ 0.68
CDIP1-205ENST00000563332 ASXL1Q8IXJ9 1541 aa19.29■□□□□ 0.68
CDIP1-205ENST00000563332 NRXN1Q9ULB1 1477 aa19.29■□□□□ 0.68
CDIP1-205ENST00000563332 KIAA1210Q9ULL0 1709 aa19.29■□□□□ 0.68
CDIP1-205ENST00000563332 CCDC136Q96JN2 1154 aa19.28■□□□□ 0.68
CDIP1-205ENST00000563332 RNF123Q5XPI4 1314 aa19.28■□□□□ 0.68
CDIP1-205ENST00000563332 EXOC6Q8TAG9 804 aa19.27■□□□□ 0.68
CDIP1-205ENST00000563332 PPLO60437 1756 aa19.27■□□□□ 0.68
CDIP1-205ENST00000563332 RRP1P56182 461 aaKnown RBP19.27■□□□□ 0.67
CDIP1-205ENST00000563332 ERICH6BQ5W0A0 696 aa19.27■□□□□ 0.67
CDIP1-205ENST00000563332 BLMP54132 1417 aaPredicted RBP19.26■□□□□ 0.67
CDIP1-205ENST00000563332 CABP2Q9NPB3 220 aa19.26■□□□□ 0.67
CDIP1-205ENST00000563332 PLEKHH1Q9ULM0 1364 aa19.25■□□□□ 0.67
CDIP1-205ENST00000563332 NEURL4Q96JN8 1562 aa19.24■□□□□ 0.67
CDIP1-205ENST00000563332 ADGRB1O14514 1584 aa19.23■□□□□ 0.67
CDIP1-205ENST00000563332 NSD3Q9BZ95 1437 aa19.22■□□□□ 0.67
CDIP1-205ENST00000563332 VGFO15240 615 aaPredicted RBP19.21■□□□□ 0.67
CDIP1-205ENST00000563332 MYO5BQ9ULV0 1848 aa19.21■□□□□ 0.67
CDIP1-205ENST00000563332 STAG3Q9UJ98 1225 aa19.21■□□□□ 0.67
CDIP1-205ENST00000563332 QRICH2Q9H0J4 1663 aa19.2■□□□□ 0.66
CDIP1-205ENST00000563332 APAF1O14727 1248 aa19.2■□□□□ 0.66
CDIP1-205ENST00000563332 NEXMIFQ5QGS0 1516 aa19.2■□□□□ 0.66
CDIP1-205ENST00000563332 MINK1Q8N4C8 1332 aaPredicted RBP19.19■□□□□ 0.66
CDIP1-205ENST00000563332 RPGRIP1LQ68CZ1 1315 aa19.19■□□□□ 0.66
CDIP1-205ENST00000563332 MORC1Q86VD1 984 aa19.18■□□□□ 0.66
CDIP1-205ENST00000563332 PIK3C2BO00750 1634 aa19.18■□□□□ 0.66
CDIP1-205ENST00000563332 C20orf194Q5TEA3 1177 aa19.18■□□□□ 0.66
CDIP1-205ENST00000563332 SPINK5Q9NQ38 1064 aaPredicted RBP19.18■□□□□ 0.66
CDIP1-205ENST00000563332 DIP2BQ9P265 1576 aa19.18■□□□□ 0.66
CDIP1-205ENST00000563332 GLI2P10070 1586 aa19.17■□□□□ 0.66
CDIP1-205ENST00000563332 PDE3BQ13370 1112 aa19.17■□□□□ 0.66
CDIP1-205ENST00000563332 NEUROD2Q15784 382 aa19.17■□□□□ 0.66
CDIP1-205ENST00000563332 SKAP1Q86WV1 359 aa19.17■□□□□ 0.66
CDIP1-205ENST00000563332 DMRT2Q9Y5R5 561 aa19.17■□□□□ 0.66
CDIP1-205ENST00000563332 SETBP1Q9Y6X0 1596 aa19.16■□□□□ 0.66
CDIP1-205ENST00000563332 RRP7AQ9Y3A4 280 aaKnown RBP19.15■□□□□ 0.66
CDIP1-205ENST00000563332 ZMYM4Q5VZL5 1548 aa19.15■□□□□ 0.66
CDIP1-205ENST00000563332 SRPK2P78362 688 aaKnown RBP19.15■□□□□ 0.66
CDIP1-205ENST00000563332 PRAM1Q96QH2 718 aa19.14■□□□□ 0.65
CDIP1-205ENST00000563332 SLC52A1Q9NWF4 448 aa19.14■□□□□ 0.65
CDIP1-205ENST00000563332 MYO3AQ8NEV4 1616 aa19.14■□□□□ 0.65
CDIP1-205ENST00000563332 MSH5O43196 834 aa19.13■□□□□ 0.65
CDIP1-205ENST00000563332 CRBNQ96SW2 442 aa19.13■□□□□ 0.65
CDIP1-205ENST00000563332 SBNO2Q9Y2G9 1366 aa19.13■□□□□ 0.65
CDIP1-205ENST00000563332 PREX1Q8TCU6 1659 aa19.12■□□□□ 0.65
CDIP1-205ENST00000563332 TULP4Q9NRJ4 1543 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms