RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 ACIN1Q9UKV3 1341 aaKnown RBP12.73□□□□□ -0.37
UBR1-204ENST00000563239 LTBP4Q8N2S1 1624 aa12.72□□□□□ -0.37
UBR1-204ENST00000563239 IQGAP1P46940 1657 aa12.71□□□□□ -0.37
UBR1-204ENST00000563239 RIMS2Q9UQ26 1411 aa12.71□□□□□ -0.38
UBR1-204ENST00000563239 ZNF335Q9H4Z2 1342 aaPredicted RBP12.7□□□□□ -0.38
UBR1-204ENST00000563239 CHGAP10645 457 aaKnown RBP12.7□□□□□ -0.38
UBR1-204ENST00000563239 EID1Q9Y6B2 187 aa12.7□□□□□ -0.38
UBR1-204ENST00000563239 CERKQ8TCT0 537 aa12.67□□□□□ -0.38
UBR1-204ENST00000563239 TRIM26Q12899 539 aaPredicted RBP12.66□□□□□ -0.38
UBR1-204ENST00000563239 NUTM2DQ5VT03 806 aaPredicted RBP12.66□□□□□ -0.38
UBR1-204ENST00000563239 PLEKHG1Q9ULL1 1385 aa12.66□□□□□ -0.38
UBR1-204ENST00000563239 NEXMIFQ5QGS0 1516 aa12.65□□□□□ -0.38
UBR1-204ENST00000563239 ANKRD30BQ9BXX2 1392 aa12.65□□□□□ -0.38
UBR1-204ENST00000563239 KIF1BO60333 1816 aa12.65□□□□□ -0.39
UBR1-204ENST00000563239 SPATA31E1Q6ZUB1 1445 aa12.64□□□□□ -0.39
UBR1-204ENST00000563239 STRCP1A6NGW2 1772 aa12.64□□□□□ -0.39
UBR1-204ENST00000563239 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.64□□□□□ -0.39
UBR1-204ENST00000563239 SLC26A8Q96RN1 970 aa12.64□□□□□ -0.39
UBR1-204ENST00000563239 CCDC144AA2RUR9 1427 aa12.63□□□□□ -0.39
UBR1-204ENST00000563239 ADAMTS13Q76LX8 1427 aa12.63□□□□□ -0.39
UBR1-204ENST00000563239 HDGFP51858 240 aaKnown RBP12.63□□□□□ -0.39
UBR1-204ENST00000563239 ZNF326Q5BKZ1 582 aaKnown RBP12.63□□□□□ -0.39
UBR1-204ENST00000563239 PPP1R15AO75807 674 aaPredicted RBP12.62□□□□□ -0.39
UBR1-204ENST00000563239 NRXN3Q9Y4C0 1643 aa12.61□□□□□ -0.39
UBR1-204ENST00000563239 CPS1P31327 1500 aa12.61□□□□□ -0.39
UBR1-204ENST00000563239 TBX22Q9Y458 520 aa12.6□□□□□ -0.39
UBR1-204ENST00000563239 SETBP1Q9Y6X0 1596 aa12.6□□□□□ -0.39
UBR1-204ENST00000563239 RPGRIP1LQ68CZ1 1315 aa12.6□□□□□ -0.39
UBR1-204ENST00000563239 IQSEC2Q5JU85 1478 aa12.59□□□□□ -0.39
UBR1-204ENST00000563239 PPLO60437 1756 aa12.58□□□□□ -0.39
UBR1-204ENST00000563239 LRRC7Q96NW7 1537 aa12.58□□□□□ -0.4
UBR1-204ENST00000563239 KCNA6P17658 529 aa12.58□□□□□ -0.4
UBR1-204ENST00000563239 RGL3Q3MIN7 710 aa12.58□□□□□ -0.4
UBR1-204ENST00000563239 BCANQ96GW7 911 aa12.58□□□□□ -0.4
UBR1-204ENST00000563239 DIP2AQ14689 1571 aa12.57□□□□□ -0.4
UBR1-204ENST00000563239 NWD1Q149M9 1564 aa12.57□□□□□ -0.4
UBR1-204ENST00000563239 IFT172Q9UG01 1749 aa12.57□□□□□ -0.4
UBR1-204ENST00000563239 PTPRUQ92729 1446 aa12.56□□□□□ -0.4
UBR1-204ENST00000563239 VGFO15240 615 aaPredicted RBP12.56□□□□□ -0.4
UBR1-204ENST00000563239 ADGRF5Q8IZF2 1346 aa12.56□□□□□ -0.4
UBR1-204ENST00000563239 CHD2O14647 1828 aaKnown RBP12.55□□□□□ -0.4
UBR1-204ENST00000563239 METP08581 1390 aa12.55□□□□□ -0.4
UBR1-204ENST00000563239 PIK3R4Q99570 1358 aa12.55□□□□□ -0.4
UBR1-204ENST00000563239 XIRP1Q702N8 1843 aaKnown RBP12.54□□□□□ -0.4
UBR1-204ENST00000563239 DHX57Q6P158 1386 aaKnown RBP12.54□□□□□ -0.4
UBR1-204ENST00000563239 SETD1AO15047 1707 aaKnown RBP12.54□□□□□ -0.4
UBR1-204ENST00000563239 ALKQ9UM73 1620 aa12.53□□□□□ -0.4
UBR1-204ENST00000563239 NKTRP30414 1462 aaKnown RBP12.53□□□□□ -0.4
UBR1-204ENST00000563239 NRXN1Q9ULB1 1477 aa12.53□□□□□ -0.4
UBR1-204ENST00000563239 RBM33Q96EV2 1170 aaKnown RBP12.52□□□□□ -0.41
UBR1-204ENST00000563239 ADRA2BP18089 450 aa12.51□□□□□ -0.41
UBR1-204ENST00000563239 PROSER2Q86WR7 435 aaPredicted RBP12.51□□□□□ -0.41
UBR1-204ENST00000563239 AMOTL2Q9Y2J4 779 aa12.51□□□□□ -0.41
UBR1-204ENST00000563239 TMEM94Q12767 1356 aa12.51□□□□□ -0.41
UBR1-204ENST00000563239 PIK3C2GO75747 1445 aa12.51□□□□□ -0.41
UBR1-204ENST00000563239 MYOM2P54296 1465 aa12.51□□□□□ -0.41
UBR1-204ENST00000563239 XRN1Q8IZH2 1706 aaKnown RBP12.51□□□□□ -0.41
UBR1-204ENST00000563239 UBAP1LF5GYI3 381 aa12.49□□□□□ -0.41
UBR1-204ENST00000563239 ASXL1Q8IXJ9 1541 aa12.48□□□□□ -0.41
UBR1-204ENST00000563239 SIN3AQ96ST3 1273 aa12.48□□□□□ -0.41
UBR1-204ENST00000563239 DCAF11Q8TEB1 546 aa12.47□□□□□ -0.41
UBR1-204ENST00000563239 PCGF6Q9BYE7 350 aa12.47□□□□□ -0.41
UBR1-204ENST00000563239 C14orf93Q9H972 538 aaKnown RBP12.47□□□□□ -0.41
UBR1-204ENST00000563239 PRAG1Q86YV5 1406 aa12.46□□□□□ -0.41
UBR1-204ENST00000563239 KDM2AQ9Y2K7 1162 aa12.46□□□□□ -0.41
UBR1-204ENST00000563239 NCOA3Q9Y6Q9 1424 aa12.45□□□□□ -0.42
UBR1-204ENST00000563239 CFAP70Q5T0N1 1121 aa12.45□□□□□ -0.42
UBR1-204ENST00000563239 TMEM132EQ6IEE7 984 aa12.45□□□□□ -0.42
UBR1-204ENST00000563239 ROBO2Q9HCK4 1378 aa12.44□□□□□ -0.42
UBR1-204ENST00000563239 TOM1O60784 492 aa12.44□□□□□ -0.42
UBR1-204ENST00000563239 PTCH1Q13635 1447 aa12.44□□□□□ -0.42
UBR1-204ENST00000563239 STAC3Q96MF2 364 aa12.43□□□□□ -0.42
UBR1-204ENST00000563239 LRPPRCP42704 1394 aaKnown RBP12.43□□□□□ -0.42
UBR1-204ENST00000563239 L3MBTL2Q969R5 705 aa12.42□□□□□ -0.42
UBR1-204ENST00000563239 TECPR2O15040 1411 aa12.42□□□□□ -0.42
UBR1-204ENST00000563239 ADGRB1O14514 1584 aa12.42□□□□□ -0.42
UBR1-204ENST00000563239 ABCC11Q96J66 1382 aa12.42□□□□□ -0.42
UBR1-204ENST00000563239 LAMC1P11047 1609 aa12.41□□□□□ -0.42
UBR1-204ENST00000563239 PIP4K2BP78356 416 aa12.41□□□□□ -0.42
UBR1-204ENST00000563239 NEUROD1Q13562 356 aa12.41□□□□□ -0.42
UBR1-204ENST00000563239 YTHDC2Q9H6S0 1430 aaKnown RBP12.41□□□□□ -0.42
UBR1-204ENST00000563239 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.41□□□□□ -0.42
UBR1-204ENST00000563239 MSH6P52701 1360 aa12.41□□□□□ -0.42
UBR1-204ENST00000563239 C19orf44Q9H6X5 657 aa12.4□□□□□ -0.42
UBR1-204ENST00000563239 STK26Q9P289 416 aa12.4□□□□□ -0.42
UBR1-204ENST00000563239 KNDC1Q76NI1 1749 aa12.4□□□□□ -0.43
UBR1-204ENST00000563239 ADGRL3Q9HAR2 1447 aa12.39□□□□□ -0.43
UBR1-204ENST00000563239 PLEKHH1Q9ULM0 1364 aa12.39□□□□□ -0.43
UBR1-204ENST00000563239 NALCNQ8IZF0 1738 aa12.39□□□□□ -0.43
UBR1-204ENST00000563239 WAPLQ7Z5K2 1190 aa12.38□□□□□ -0.43
UBR1-204ENST00000563239 C14orf37Q86TY3 774 aa12.38□□□□□ -0.43
UBR1-204ENST00000563239 SIRT1Q96EB6 747 aa12.38□□□□□ -0.43
UBR1-204ENST00000563239 SLAIN2Q9P270 581 aa12.38□□□□□ -0.43
UBR1-204ENST00000563239 FAM135BQ49AJ0 1406 aa12.37□□□□□ -0.43
UBR1-204ENST00000563239 DCCP43146 1447 aa12.37□□□□□ -0.43
UBR1-204ENST00000563239 SCAF1Q9H7N4 1312 aaKnown RBP12.37□□□□□ -0.43
UBR1-204ENST00000563239 HSPA1LP34931 641 aa12.36□□□□□ -0.43
UBR1-204ENST00000563239 CADPS2Q86UW7 1296 aa12.36□□□□□ -0.43
UBR1-204ENST00000563239 ATF3P18847 181 aa12.35□□□□□ -0.43
UBR1-204ENST00000563239 NBPF1Q3BBV0 1214 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms