RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 PROM2Q8N271 834 aa9.29□□□□□ -0.92
CNOT1-204ENST00000563130 E9PCH4 1651 aa9.28□□□□□ -0.92
CNOT1-204ENST00000563130 PLA2R1Q13018 1463 aa9.28□□□□□ -0.92
CNOT1-204ENST00000563130 SETD5Q9C0A6 1442 aa9.28□□□□□ -0.92
CNOT1-204ENST00000563130 SYNMO15061 1565 aa9.27□□□□□ -0.92
CNOT1-204ENST00000563130 CFAP65Q6ZU64 1925 aaKnown RBP9.27□□□□□ -0.93
CNOT1-204ENST00000563130 UGGT1Q9NYU2 1555 aa9.26□□□□□ -0.93
CNOT1-204ENST00000563130 SPDYE1Q8NFV5 336 aaPredicted RBP9.26□□□□□ -0.93
CNOT1-204ENST00000563130 STRCQ7RTU9 1775 aa9.26□□□□□ -0.93
CNOT1-204ENST00000563130 IDI1Q13907 227 aa9.26□□□□□ -0.93
CNOT1-204ENST00000563130 SLC52A1Q9NWF4 448 aa9.26□□□□□ -0.93
CNOT1-204ENST00000563130 ACIN1Q9UKV3 1341 aaKnown RBP9.25□□□□□ -0.93
CNOT1-204ENST00000563130 PTPRTO14522 1441 aa9.25□□□□□ -0.93
CNOT1-204ENST00000563130 RAB3GAP2Q9H2M9 1393 aa9.25□□□□□ -0.93
CNOT1-204ENST00000563130 THEMISQ8N1K5 641 aaPredicted RBP9.25□□□□□ -0.93
CNOT1-204ENST00000563130 HRCP23327 699 aa9.24□□□□□ -0.93
CNOT1-204ENST00000563130 TRIM52Q96A61 297 aa9.24□□□□□ -0.93
CNOT1-204ENST00000563130 PIK3C2BO00750 1634 aa9.24□□□□□ -0.93
CNOT1-204ENST00000563130 UBR1Q8IWV7 1749 aa9.24□□□□□ -0.93
CNOT1-204ENST00000563130 KDM5AP29375 1690 aaKnown RBP9.24□□□□□ -0.93
CNOT1-204ENST00000563130 PKD2Q13563 968 aa9.23□□□□□ -0.93
CNOT1-204ENST00000563130 ARHGAP23Q9P227 1491 aa9.23□□□□□ -0.93
CNOT1-204ENST00000563130 SLIT1O75093 1534 aa9.22□□□□□ -0.93
CNOT1-204ENST00000563130 STAG3Q9UJ98 1225 aa9.22□□□□□ -0.93
CNOT1-204ENST00000563130 PITPNM1O00562 1244 aa9.21□□□□□ -0.93
CNOT1-204ENST00000563130 MPHOSPH9Q99550 1183 aa9.21□□□□□ -0.93
CNOT1-204ENST00000563130 ADGRB3O60242 1522 aa9.21□□□□□ -0.93
CNOT1-204ENST00000563130 NCKAP5LQ9HCH0 1330 aa9.21□□□□□ -0.93
CNOT1-204ENST00000563130 TMEM2Q9UHN6 1383 aa9.21□□□□□ -0.94
CNOT1-204ENST00000563130 SPHKAPQ2M3C7 1700 aa9.21□□□□□ -0.94
CNOT1-204ENST00000563130 TRPM2O94759 1503 aa9.21□□□□□ -0.94
CNOT1-204ENST00000563130 NEURL4Q96JN8 1562 aa9.21□□□□□ -0.94
CNOT1-204ENST00000563130 MED14O60244 1454 aa9.2□□□□□ -0.94
CNOT1-204ENST00000563130 ANKLE2Q86XL3 938 aa9.2□□□□□ -0.94
CNOT1-204ENST00000563130 TMEM131LA2VDJ0 1609 aa9.2□□□□□ -0.94
CNOT1-204ENST00000563130 CLEC11AQ9Y240 323 aa9.2□□□□□ -0.94
CNOT1-204ENST00000563130 LTKP29376 864 aa9.19□□□□□ -0.94
CNOT1-204ENST00000563130 TRIM26Q12899 539 aaPredicted RBP9.19□□□□□ -0.94
CNOT1-204ENST00000563130 POLR1AO95602 1720 aaPredicted RBP9.18□□□□□ -0.94
CNOT1-204ENST00000563130 ZFYVE9O95405 1425 aa9.18□□□□□ -0.94
CNOT1-204ENST00000563130 SCAF11Q99590 1463 aaKnown RBP9.18□□□□□ -0.94
CNOT1-204ENST00000563130 TXNDC2Q86VQ3 553 aa9.17□□□□□ -0.94
CNOT1-204ENST00000563130 CLTCL1P53675 1640 aa9.17□□□□□ -0.94
CNOT1-204ENST00000563130 NPHP4O75161 1426 aaPredicted RBP9.17□□□□□ -0.94
CNOT1-204ENST00000563130 CHRDL2Q6WN34 429 aa9.16□□□□□ -0.94
CNOT1-204ENST00000563130 EID1Q9Y6B2 187 aa9.16□□□□□ -0.94
CNOT1-204ENST00000563130 MYO5BQ9ULV0 1848 aa9.15□□□□□ -0.94
CNOT1-204ENST00000563130 IQGAP1P46940 1657 aa9.15□□□□□ -0.95
CNOT1-204ENST00000563130 RIMS2Q9UQ26 1411 aa9.15□□□□□ -0.95
CNOT1-204ENST00000563130 CHGAP10645 457 aaKnown RBP9.14□□□□□ -0.95
CNOT1-204ENST00000563130 FBXO3Q9UK99 471 aa9.14□□□□□ -0.95
CNOT1-204ENST00000563130 LTBP4Q8N2S1 1624 aa9.14□□□□□ -0.95
CNOT1-204ENST00000563130 CCDC144AA2RUR9 1427 aa9.14□□□□□ -0.95
CNOT1-204ENST00000563130 ANKRD30BQ9BXX2 1392 aa9.14□□□□□ -0.95
CNOT1-204ENST00000563130 HDGFP51858 240 aaKnown RBP9.14□□□□□ -0.95
CNOT1-204ENST00000563130 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.13□□□□□ -0.95
CNOT1-204ENST00000563130 SPATA31E1Q6ZUB1 1445 aa9.13□□□□□ -0.95
CNOT1-204ENST00000563130 PLEKHG1Q9ULL1 1385 aa9.13□□□□□ -0.95
CNOT1-204ENST00000563130 ZNF335Q9H4Z2 1342 aaPredicted RBP9.12□□□□□ -0.95
CNOT1-204ENST00000563130 KIF1BO60333 1816 aa9.12□□□□□ -0.95
CNOT1-204ENST00000563130 PRR29P0C7W0 189 aa9.12□□□□□ -0.95
CNOT1-204ENST00000563130 NEXMIFQ5QGS0 1516 aa9.12□□□□□ -0.95
CNOT1-204ENST00000563130 RPGRIP1LQ68CZ1 1315 aa9.11□□□□□ -0.95
CNOT1-204ENST00000563130 ADAMTS13Q76LX8 1427 aa9.1□□□□□ -0.95
CNOT1-204ENST00000563130 PPP1R15AO75807 674 aaPredicted RBP9.1□□□□□ -0.95
CNOT1-204ENST00000563130 ZNF326Q5BKZ1 582 aaKnown RBP9.1□□□□□ -0.95
CNOT1-204ENST00000563130 NUTM2DQ5VT03 806 aaPredicted RBP9.1□□□□□ -0.95
CNOT1-204ENST00000563130 CERKQ8TCT0 537 aa9.1□□□□□ -0.95
CNOT1-204ENST00000563130 SLC26A8Q96RN1 970 aa9.09□□□□□ -0.95
CNOT1-204ENST00000563130 TBX22Q9Y458 520 aa9.09□□□□□ -0.95
CNOT1-204ENST00000563130 SETBP1Q9Y6X0 1596 aa9.08□□□□□ -0.96
CNOT1-204ENST00000563130 CPS1P31327 1500 aa9.08□□□□□ -0.96
CNOT1-204ENST00000563130 NRXN3Q9Y4C0 1643 aa9.08□□□□□ -0.96
CNOT1-204ENST00000563130 IQSEC2Q5JU85 1478 aa9.07□□□□□ -0.96
CNOT1-204ENST00000563130 VGFO15240 615 aaPredicted RBP9.07□□□□□ -0.96
CNOT1-204ENST00000563130 STRCP1A6NGW2 1772 aa9.07□□□□□ -0.96
CNOT1-204ENST00000563130 PPLO60437 1756 aa9.07□□□□□ -0.96
CNOT1-204ENST00000563130 DIP2AQ14689 1571 aa9.07□□□□□ -0.96
CNOT1-204ENST00000563130 DHX57Q6P158 1386 aaKnown RBP9.07□□□□□ -0.96
CNOT1-204ENST00000563130 PIK3R4Q99570 1358 aa9.06□□□□□ -0.96
CNOT1-204ENST00000563130 KCNA6P17658 529 aa9.06□□□□□ -0.96
CNOT1-204ENST00000563130 RGL3Q3MIN7 710 aa9.06□□□□□ -0.96
CNOT1-204ENST00000563130 NWD1Q149M9 1564 aa9.06□□□□□ -0.96
CNOT1-204ENST00000563130 IFT172Q9UG01 1749 aa9.06□□□□□ -0.96
CNOT1-204ENST00000563130 FXR2P51116 673 aaKnown RBP eCLIP9.05□□□□□ -0.961e-8■■■■■ 28.9
CNOT1-204ENST00000563130 BCANQ96GW7 911 aa9.05□□□□□ -0.96
CNOT1-204ENST00000563130 LRRC7Q96NW7 1537 aa9.05□□□□□ -0.96
CNOT1-204ENST00000563130 ADGRF5Q8IZF2 1346 aa9.04□□□□□ -0.96
CNOT1-204ENST00000563130 MYOM2P54296 1465 aa9.04□□□□□ -0.96
CNOT1-204ENST00000563130 NRXN1Q9ULB1 1477 aa9.04□□□□□ -0.96
CNOT1-204ENST00000563130 CHD2O14647 1828 aaKnown RBP9.04□□□□□ -0.96
CNOT1-204ENST00000563130 NKTRP30414 1462 aaKnown RBP9.03□□□□□ -0.96
CNOT1-204ENST00000563130 PCGF6Q9BYE7 350 aa9.03□□□□□ -0.96
CNOT1-204ENST00000563130 RTN4Q9NQC3 1192 aaKnown RBP9.03□□□□□ -0.96
CNOT1-204ENST00000563130 METP08581 1390 aa9.03□□□□□ -0.96
CNOT1-204ENST00000563130 PIK3C2GO75747 1445 aa9.03□□□□□ -0.96
CNOT1-204ENST00000563130 PTPRUQ92729 1446 aa9.03□□□□□ -0.96
CNOT1-204ENST00000563130 SETD1AO15047 1707 aaKnown RBP9.03□□□□□ -0.96
CNOT1-204ENST00000563130 PIP4P2Q8N4L2 257 aa9.03□□□□□ -0.96
CNOT1-204ENST00000563130 ALKQ9UM73 1620 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms